RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 ERC1Q8IUD2 1116 aa12.1□□□□□ -0.47
LIG1-209ENST00000596104 SLC44A5Q8NCS7 719 aa12.1□□□□□ -0.47
LIG1-209ENST00000596104 CRNKL1Q9BZJ0 848 aaKnown RBP12.1□□□□□ -0.47
LIG1-209ENST00000596104 MCM9Q9NXL9 1143 aa12.1□□□□□ -0.47
LIG1-209ENST00000596104 HOXC10Q9NYD6 342 aa12.1□□□□□ -0.47
LIG1-209ENST00000596104 MYO5AQ9Y4I1 1855 aaKnown RBP12.1□□□□□ -0.47
LIG1-209ENST00000596104 TCRBV5S4A2TA0A5A2 114 aa12.09□□□□□ -0.47
LIG1-209ENST00000596104 SEPT4O43236 478 aa12.09□□□□□ -0.47
LIG1-209ENST00000596104 CYP2D6P10635 497 aa12.09□□□□□ -0.47
LIG1-209ENST00000596104 DSG3P32926 999 aa12.09□□□□□ -0.47
LIG1-209ENST00000596104 SNX17Q15036 470 aa12.09□□□□□ -0.47
LIG1-209ENST00000596104 TTF1Q15361 905 aaPredicted RBP12.09□□□□□ -0.47
LIG1-209ENST00000596104 SLC9C2Q5TAH2 1124 aa12.09□□□□□ -0.47
LIG1-209ENST00000596104 ANO1Q5XXA6 986 aa12.09□□□□□ -0.47
LIG1-209ENST00000596104 SLC39A5Q6ZMH5 540 aa12.09□□□□□ -0.47
LIG1-209ENST00000596104 TMEM179Q6ZVK1 233 aa12.09□□□□□ -0.47
LIG1-209ENST00000596104 SIAH1Q8IUQ4 282 aa12.09□□□□□ -0.47
LIG1-209ENST00000596104 LCORLQ8N3X6 602 aa12.09□□□□□ -0.47
LIG1-209ENST00000596104 MB21D1Q8N884 522 aa12.09□□□□□ -0.47
LIG1-209ENST00000596104 ARRDC4Q8NCT1 418 aa12.09□□□□□ -0.47
LIG1-209ENST00000596104 SDR42E1Q8WUS8 393 aa12.09□□□□□ -0.47
LIG1-209ENST00000596104 TANGO6Q9C0B7 1094 aa12.09□□□□□ -0.47
LIG1-209ENST00000596104 IL1RAPL2Q9NP60 686 aa12.09□□□□□ -0.47
LIG1-209ENST00000596104 DCP1AQ9NPI6 582 aaPredicted RBP12.09□□□□□ -0.47
LIG1-209ENST00000596104 ZNF532Q9HCE3 1301 aa12.09□□□□□ -0.47
LIG1-209ENST00000596104 MPHOSPH10O00566 681 aaKnown RBP12.08□□□□□ -0.48
LIG1-209ENST00000596104 CLEC10AQ8IUN9 316 aa12.08□□□□□ -0.48
LIG1-209ENST00000596104 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.08□□□□□ -0.48
LIG1-209ENST00000596104 ABRAQ8N0Z2 381 aa12.08□□□□□ -0.48
LIG1-209ENST00000596104 RHPN1Q8TCX5 695 aa12.08□□□□□ -0.48
LIG1-209ENST00000596104 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.08□□□□□ -0.48
LIG1-209ENST00000596104 ATG4CQ96DT6 458 aa12.08□□□□□ -0.48
LIG1-209ENST00000596104 COL25A1Q9BXS0 654 aaPredicted RBP12.08□□□□□ -0.48
LIG1-209ENST00000596104 MROH8Q9H579 483 aa12.08□□□□□ -0.48
LIG1-209ENST00000596104 PRKAG2Q9UGJ0 569 aa12.08□□□□□ -0.48
LIG1-209ENST00000596104 ATP11BQ9Y2G3 1177 aa12.08□□□□□ -0.48
LIG1-209ENST00000596104 TMX2Q9Y320 296 aa12.08□□□□□ -0.48
LIG1-209ENST00000596104 ZNF236Q9UL36 1845 aa12.08□□□□□ -0.48
LIG1-209ENST00000596104 KBTBD13C9JR72 458 aa12.07□□□□□ -0.48
LIG1-209ENST00000596104 GOLIM4O00461 696 aa12.07□□□□□ -0.48
LIG1-209ENST00000596104 AKR1B1P15121 316 aa12.07□□□□□ -0.48
LIG1-209ENST00000596104 SHHQ15465 462 aa12.07□□□□□ -0.48
LIG1-209ENST00000596104 TRIM60Q495X7 471 aa12.07□□□□□ -0.48
LIG1-209ENST00000596104 PRAMEF19Q5SWL8 479 aa12.07□□□□□ -0.48
LIG1-209ENST00000596104 C9orf50Q5SZB4 431 aa12.07□□□□□ -0.48
LIG1-209ENST00000596104 DYNLL2Q96FJ2 89 aa12.07□□□□□ -0.48
LIG1-209ENST00000596104 MAML3Q96JK9 1138 aa12.07□□□□□ -0.48
LIG1-209ENST00000596104 FAM161BQ96MY7 647 aa12.07□□□□□ -0.48
LIG1-209ENST00000596104 VCPKMTQ9H867 229 aa12.07□□□□□ -0.48
LIG1-209ENST00000596104 PDLIM7Q9NR12 457 aa12.07□□□□□ -0.48
LIG1-209ENST00000596104 SWAP70Q9UH65 585 aa12.07□□□□□ -0.48
LIG1-209ENST00000596104 MYH1P12882 1939 aa12.07□□□□□ -0.48
LIG1-209ENST00000596104 FRMPD3Q5JV73 1810 aa12.07□□□□□ -0.48
LIG1-209ENST00000596104 SMIM22K7EJ46 135 aa12.06□□□□□ -0.48
LIG1-209ENST00000596104 PRKAB2O43741 272 aa12.06□□□□□ -0.48
LIG1-209ENST00000596104 FLOT1O75955 427 aa12.06□□□□□ -0.48
LIG1-209ENST00000596104 ADCYAP1R1P41586 468 aa12.06□□□□□ -0.48
LIG1-209ENST00000596104 ICA1Q05084 483 aa12.06□□□□□ -0.48
LIG1-209ENST00000596104 TMEM132BQ14DG7 1078 aa12.06□□□□□ -0.48
LIG1-209ENST00000596104 LRRC41Q15345 812 aa12.06□□□□□ -0.48
LIG1-209ENST00000596104 HSP90AB4PQ58FF6 505 aa12.06□□□□□ -0.48
LIG1-209ENST00000596104 FAM47AQ5JRC9 791 aa12.06□□□□□ -0.48
LIG1-209ENST00000596104 ZNF697Q5TEC3 545 aa12.06□□□□□ -0.48
LIG1-209ENST00000596104 C1orf53Q5VUE5 145 aa12.06□□□□□ -0.48
LIG1-209ENST00000596104 NCAPG2Q86XI2 1143 aa12.06□□□□□ -0.48
LIG1-209ENST00000596104 SPICE1Q8N0Z3 855 aa12.06□□□□□ -0.48
LIG1-209ENST00000596104 BADQ92934 168 aa12.06□□□□□ -0.48
LIG1-209ENST00000596104 ARMT1Q9H993 441 aa12.06□□□□□ -0.48
LIG1-209ENST00000596104 SLC5A4Q9NY91 659 aa12.06□□□□□ -0.48
LIG1-209ENST00000596104 A0A0G2JMZ2 1700 aa12.06□□□□□ -0.48
LIG1-209ENST00000596104 TRIM43BA6NCK2 446 aa12.05□□□□□ -0.48
LIG1-209ENST00000596104 WDR46O15213 610 aaKnown RBP12.05□□□□□ -0.48
LIG1-209ENST00000596104 PLS1Q14651 629 aa12.05□□□□□ -0.48
LIG1-209ENST00000596104 SLFNL1Q499Z3 407 aa12.05□□□□□ -0.48
LIG1-209ENST00000596104 SH3RF1Q7Z6J0 888 aa12.05□□□□□ -0.48
LIG1-209ENST00000596104 CLASRPQ8N2M8 674 aaKnown RBP12.05□□□□□ -0.48
LIG1-209ENST00000596104 PANK1Q8TE04 598 aa12.05□□□□□ -0.48
LIG1-209ENST00000596104 TRIM43Q96BQ3 446 aaPredicted RBP12.05□□□□□ -0.48
LIG1-209ENST00000596104 KIF1BPQ96EK5 621 aa12.05□□□□□ -0.48
LIG1-209ENST00000596104 CCDC17Q96LX7 622 aa12.05□□□□□ -0.48
LIG1-209ENST00000596104 DNAJC2Q99543 621 aaKnown RBP12.05□□□□□ -0.48
LIG1-209ENST00000596104 CDX2Q99626 313 aaPredicted RBP12.05□□□□□ -0.48
LIG1-209ENST00000596104 ARHGEF10LQ9HCE6 1279 aa12.05□□□□□ -0.48
LIG1-209ENST00000596104 PRDM5Q9NQX1 630 aaPredicted RBP12.05□□□□□ -0.48
LIG1-209ENST00000596104 ATP8A2Q9NTI2 1148 aa12.05□□□□□ -0.48
LIG1-209ENST00000596104 NRBP1Q9UHY1 535 aa12.05□□□□□ -0.48
LIG1-209ENST00000596104 ADAMTS5Q9UNA0 930 aa12.05□□□□□ -0.48
LIG1-209ENST00000596104 DNAH12Q6ZR08 3092 aa12.05□□□□□ -0.48
LIG1-209ENST00000596104 RLFQ13129 1914 aa12.04□□□□□ -0.48
LIG1-209ENST00000596104 CYP2D7A0A087X1C5 515 aa12.04□□□□□ -0.48
LIG1-209ENST00000596104 MBD4O95243 580 aa12.04□□□□□ -0.48
LIG1-209ENST00000596104 SLC25A27O95847 323 aa12.04□□□□□ -0.48
LIG1-209ENST00000596104 MYCNP04198 464 aaPredicted RBP12.04□□□□□ -0.48
LIG1-209ENST00000596104 FCER1AP12319 257 aa12.04□□□□□ -0.48
LIG1-209ENST00000596104 ADD2P35612 726 aa12.04□□□□□ -0.48
LIG1-209ENST00000596104 TLE2Q04725 743 aa12.04□□□□□ -0.48
LIG1-209ENST00000596104 C12orf60Q5U649 245 aa12.04□□□□□ -0.48
LIG1-209ENST00000596104 SIRT2Q8IXJ6 389 aa12.04□□□□□ -0.48
LIG1-209ENST00000596104 FERMT2Q96AC1 680 aa12.04□□□□□ -0.48
LIG1-209ENST00000596104 SEMA6BQ9H3T3 888 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms