RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 NMT2O60551 498 aa15.26■□□□□ 0.03
SHKBP1-209ENST00000595803 FKTNO75072 461 aa15.26■□□□□ 0.03
SHKBP1-209ENST00000595803 AKR1B1P15121 316 aa15.26■□□□□ 0.03
SHKBP1-209ENST00000595803 SCRN1Q12765 414 aa15.26■□□□□ 0.03
SHKBP1-209ENST00000595803 TATDN1Q6P1N9 297 aa15.26■□□□□ 0.03
SHKBP1-209ENST00000595803 SULF1Q8IWU6 871 aa15.26■□□□□ 0.03
SHKBP1-209ENST00000595803 ANKS1AQ92625 1134 aa15.26■□□□□ 0.03
SHKBP1-209ENST00000595803 GTF3C6Q969F1 213 aa15.26■□□□□ 0.03
SHKBP1-209ENST00000595803 DEFB129Q9H1M3 183 aa15.26■□□□□ 0.03
SHKBP1-209ENST00000595803 KAT14Q9H8E8 782 aa15.26■□□□□ 0.03
SHKBP1-209ENST00000595803 IL17RBQ9NRM6 502 aa15.26■□□□□ 0.03
SHKBP1-209ENST00000595803 DDX60LQ5H9U9 1706 aaKnown RBP15.26■□□□□ 0.03
SHKBP1-209ENST00000595803 KIAA0100Q14667 2235 aaKnown RBP15.25■□□□□ 0.03
SHKBP1-209ENST00000595803 CEP290O15078 2479 aa15.25■□□□□ 0.03
SHKBP1-209ENST00000595803 FAM196BA6NMK8 535 aa15.25■□□□□ 0.03
SHKBP1-209ENST00000595803 CALM1P0DP23 149 aa15.25■□□□□ 0.03
SHKBP1-209ENST00000595803 CALM2P0DP24 149 aa15.25■□□□□ 0.03
SHKBP1-209ENST00000595803 CALM3P0DP25 149 aa15.25■□□□□ 0.03
SHKBP1-209ENST00000595803 METAP2P50579 478 aaKnown RBP eCLIP15.25■□□□□ 0.03
SHKBP1-209ENST00000595803 PPP4R3BQ5MIZ7 849 aa15.25■□□□□ 0.03
SHKBP1-209ENST00000595803 APOA5Q6Q788 366 aa15.25■□□□□ 0.03
SHKBP1-209ENST00000595803 RAB11FIP4Q86YS3 637 aa15.25■□□□□ 0.03
SHKBP1-209ENST00000595803 NUP133Q8WUM0 1156 aa15.25■□□□□ 0.03
SHKBP1-209ENST00000595803 HOOK2Q96ED9 719 aa15.25■□□□□ 0.03
SHKBP1-209ENST00000595803 CABP5Q9NP86 173 aa15.25■□□□□ 0.03
SHKBP1-209ENST00000595803 SCAF8Q9UPN6 1271 aaKnown RBP15.25■□□□□ 0.03
SHKBP1-209ENST00000595803 GOLGA8AA7E2F4 631 aa15.24■□□□□ 0.03
SHKBP1-209ENST00000595803 CPLX1O14810 134 aa15.24■□□□□ 0.03
SHKBP1-209ENST00000595803 SLURP2P0DP57 97 aa15.24■□□□□ 0.03
SHKBP1-209ENST00000595803 EN2P19622 333 aaPredicted RBP15.24■□□□□ 0.03
SHKBP1-209ENST00000595803 ABCB5Q2M3G0 1257 aa15.24■□□□□ 0.03
SHKBP1-209ENST00000595803 CPLX2Q6PUV4 134 aaKnown RBP15.24■□□□□ 0.03
SHKBP1-209ENST00000595803 MIGA2Q7L4E1 593 aa15.24■□□□□ 0.03
SHKBP1-209ENST00000595803 ZNF654Q8IZM8 581 aa15.24■□□□□ 0.03
SHKBP1-209ENST00000595803 LLPHQ9BRT6 129 aaKnown RBP15.24■□□□□ 0.03
SHKBP1-209ENST00000595803 DNAJC18Q9H819 358 aa15.24■□□□□ 0.03
SHKBP1-209ENST00000595803 CHMP5Q9NZZ3 219 aa15.24■□□□□ 0.03
SHKBP1-209ENST00000595803 STX8Q9UNK0 236 aa15.24■□□□□ 0.03
SHKBP1-209ENST00000595803 CCDC196A0A1B0GTZ2 297 aa15.23■□□□□ 0.03
SHKBP1-209ENST00000595803 FKBP1BP68106 108 aa15.23■□□□□ 0.03
SHKBP1-209ENST00000595803 ST3GAL1Q11201 340 aa15.23■□□□□ 0.03
SHKBP1-209ENST00000595803 PPP2R5BQ15173 497 aa15.23■□□□□ 0.03
SHKBP1-209ENST00000595803 MICU3Q86XE3 530 aa15.23■□□□□ 0.03
SHKBP1-209ENST00000595803 OTUD5Q96G74 571 aa15.23■□□□□ 0.03
SHKBP1-209ENST00000595803 MYL10Q9BUA6 226 aa15.23■□□□□ 0.03
SHKBP1-209ENST00000595803 R3HDMLQ9H3Y0 253 aa15.23■□□□□ 0.03
SHKBP1-209ENST00000595803 NCOA5Q9HCD5 579 aaKnown RBP15.23■□□□□ 0.03
SHKBP1-209ENST00000595803 PPP2R3BQ9Y5P8 575 aa15.23■□□□□ 0.03
SHKBP1-209ENST00000595803 PITPNM2Q9BZ72 1349 aa15.22■□□□□ 0.03
SHKBP1-209ENST00000595803 DDAH1O94760 285 aa15.22■□□□□ 0.03
SHKBP1-209ENST00000595803 TOP1P11387 765 aaKnown RBP15.22■□□□□ 0.03
SHKBP1-209ENST00000595803 RXRAP19793 462 aa15.22■□□□□ 0.03
SHKBP1-209ENST00000595803 GJB2P29033 226 aa15.22■□□□□ 0.03
SHKBP1-209ENST00000595803 TM4SF4P48230 202 aa15.22■□□□□ 0.03
SHKBP1-209ENST00000595803 RCAN1P53805 252 aa15.22■□□□□ 0.03
SHKBP1-209ENST00000595803 MAP3K10Q02779 954 aa15.22■□□□□ 0.03
SHKBP1-209ENST00000595803 RTN1Q16799 776 aa15.22■□□□□ 0.03
SHKBP1-209ENST00000595803 SUPT20HL1Q3ZLR7 823 aa15.22■□□□□ 0.03
SHKBP1-209ENST00000595803 DCAF15Q66K64 600 aa15.22■□□□□ 0.03
SHKBP1-209ENST00000595803 RCSD1Q6JBY9 416 aa15.22■□□□□ 0.03
SHKBP1-209ENST00000595803 TMEM179Q6ZVK1 233 aa15.22■□□□□ 0.03
SHKBP1-209ENST00000595803 OTOP1Q7RTM1 612 aa15.22■□□□□ 0.03
SHKBP1-209ENST00000595803 CCDC144CPQ8IYA2 1237 aa15.22■□□□□ 0.03
SHKBP1-209ENST00000595803 FANCBQ8NB91 859 aa15.22■□□□□ 0.03
SHKBP1-209ENST00000595803 CEP95Q96GE4 821 aa15.22■□□□□ 0.03
SHKBP1-209ENST00000595803 TEPSINQ96N21 525 aa15.22■□□□□ 0.03
SHKBP1-209ENST00000595803 TMEM47Q9BQJ4 181 aa15.22■□□□□ 0.03
SHKBP1-209ENST00000595803 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.22■□□□□ 0.03
SHKBP1-209ENST00000595803 CFHR5Q9BXR6 569 aa15.22■□□□□ 0.03
SHKBP1-209ENST00000595803 MTMR4Q9NYA4 1195 aa15.22■□□□□ 0.03
SHKBP1-209ENST00000595803 CLIP2Q9UDT6 1046 aa15.22■□□□□ 0.03
SHKBP1-209ENST00000595803 CIZ1Q9ULV3 898 aaPredicted RBP15.22■□□□□ 0.03
SHKBP1-209ENST00000595803 TRIM17Q9Y577 477 aa15.22■□□□□ 0.03
SHKBP1-209ENST00000595803 IGKV6D-41A0A0C4DH26 115 aa15.21■□□□□ 0.03
SHKBP1-209ENST00000595803 H0YGN5 161 aa15.21■□□□□ 0.03
SHKBP1-209ENST00000595803 CDKL5O76039 1030 aa15.21■□□□□ 0.03
SHKBP1-209ENST00000595803 GDF11O95390 407 aa15.21■□□□□ 0.03
SHKBP1-209ENST00000595803 TTLL1O95922 423 aa15.21■□□□□ 0.03
SHKBP1-209ENST00000595803 ADD1P35611 737 aaKnown RBP15.21■□□□□ 0.03
SHKBP1-209ENST00000595803 NUCB2P80303 420 aa15.21■□□□□ 0.03
SHKBP1-209ENST00000595803 ATP2B2Q01814 1243 aa15.21■□□□□ 0.03
SHKBP1-209ENST00000595803 NBPF12Q5TAG4 269 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-209ENST00000595803 MOB2Q70IA6 237 aa15.21■□□□□ 0.03
SHKBP1-209ENST00000595803 CDAN1Q8IWY9 1227 aa15.21■□□□□ 0.03
SHKBP1-209ENST00000595803 FAM184AQ8NB25 1140 aa15.21■□□□□ 0.03
SHKBP1-209ENST00000595803 PNMA1Q8ND90 353 aa15.21■□□□□ 0.03
SHKBP1-209ENST00000595803 CTCFLQ8NI51 663 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-209ENST00000595803 KANSL2Q9H9L4 492 aa15.21■□□□□ 0.03
SHKBP1-209ENST00000595803 PLIN4Q96Q06 1357 aa15.21■□□□□ 0.02
SHKBP1-209ENST00000595803 NOVP48745 357 aa15.2■□□□□ 0.02
SHKBP1-209ENST00000595803 HMGN5P82970 282 aaKnown RBP15.2■□□□□ 0.02
SHKBP1-209ENST00000595803 CHRDL2Q6WN34 429 aa15.2■□□□□ 0.02
SHKBP1-209ENST00000595803 NSUN7Q8NE18 718 aaKnown RBP15.2■□□□□ 0.02
SHKBP1-209ENST00000595803 DDX11Q96FC9 970 aa15.2■□□□□ 0.02
SHKBP1-209ENST00000595803 ZNF341Q9BYN7 854 aa15.2■□□□□ 0.02
SHKBP1-209ENST00000595803 RBM28Q9NW13 759 aaKnown RBP15.2■□□□□ 0.02
SHKBP1-209ENST00000595803 KIF3AQ9Y496 699 aa15.2■□□□□ 0.02
SHKBP1-209ENST00000595803 MYH8P13535 1937 aa15.19■□□□□ 0.02
SHKBP1-209ENST00000595803 JAK2O60674 1132 aa15.19■□□□□ 0.02
SHKBP1-209ENST00000595803 CTDNEP1O95476 244 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms