RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 STAG1Q8WVM7 1258 aa17.43■□□□□ 0.38
ZNF541-205ENST00000595558 CNNM2Q9H8M5 875 aa17.43■□□□□ 0.38
ZNF541-205ENST00000595558 BSDC1Q9NW68 430 aaPredicted RBP17.43■□□□□ 0.38
ZNF541-205ENST00000595558 RPS8P62241 208 aaKnown RBP17.42■□□□□ 0.38
ZNF541-205ENST00000595558 ENAHQ8N8S7 591 aaPredicted RBP17.42■□□□□ 0.38
ZNF541-205ENST00000595558 ARHGEF1Q92888 912 aaKnown RBP17.42■□□□□ 0.38
ZNF541-205ENST00000595558 AK7Q96M32 723 aa17.42■□□□□ 0.38
ZNF541-205ENST00000595558 SETDB2Q96T68 719 aa17.42■□□□□ 0.38
ZNF541-205ENST00000595558 UBAC1Q9BSL1 405 aa17.42■□□□□ 0.38
ZNF541-205ENST00000595558 PUF60Q9UHX1 559 aaKnown RBP17.42■□□□□ 0.38
ZNF541-205ENST00000595558 AKR1B15C9JRZ8 316 aaPredicted RBP17.42■□□□□ 0.38
ZNF541-205ENST00000595558 IGSF22Q8N9C0 903 aa17.42■□□□□ 0.38
ZNF541-205ENST00000595558 UBXN6Q9BZV1 441 aa17.42■□□□□ 0.38
ZNF541-205ENST00000595558 OAS2P29728 719 aaKnown RBP17.41■□□□□ 0.38
ZNF541-205ENST00000595558 NFIXQ14938 502 aa17.41■□□□□ 0.38
ZNF541-205ENST00000595558 CAVIN4Q5BKX8 364 aa17.41■□□□□ 0.38
ZNF541-205ENST00000595558 BARGINQ6ZT62 677 aa17.41■□□□□ 0.38
ZNF541-205ENST00000595558 GPR161Q8N6U8 529 aaKnown RBP17.41■□□□□ 0.38
ZNF541-205ENST00000595558 ZNF579Q8NAF0 562 aaKnown RBP17.41■□□□□ 0.38
ZNF541-205ENST00000595558 SYMPKQ92797 1274 aaKnown RBP17.41■□□□□ 0.38
ZNF541-205ENST00000595558 PAGE5Q96GU1 130 aa17.41■□□□□ 0.38
ZNF541-205ENST00000595558 TRERF1Q96PN7 1200 aa17.41■□□□□ 0.38
ZNF541-205ENST00000595558 BCL9LQ86UU0 1499 aa17.41■□□□□ 0.38
ZNF541-205ENST00000595558 UBAP1LF5GYI3 381 aa17.41■□□□□ 0.38
ZNF541-205ENST00000595558 PKN1Q16512 942 aa17.41■□□□□ 0.38
ZNF541-205ENST00000595558 DACH1Q9UI36 760 aa17.41■□□□□ 0.38
ZNF541-205ENST00000595558 ADGRG1Q9Y653 693 aa17.41■□□□□ 0.38
ZNF541-205ENST00000595558 V9GY48 417 aaPredicted RBP17.41■□□□□ 0.38
ZNF541-205ENST00000595558 BAZ2AQ9UIF9 1905 aaKnown RBP17.41■□□□□ 0.38
ZNF541-205ENST00000595558 ERICH2A1L162 156 aa17.4■□□□□ 0.38
ZNF541-205ENST00000595558 CDC25AP30304 524 aa17.4■□□□□ 0.38
ZNF541-205ENST00000595558 HNRNPH2P55795 449 aaKnown RBP17.4■□□□□ 0.38
ZNF541-205ENST00000595558 CUL4BQ13620 913 aa17.4■□□□□ 0.38
ZNF541-205ENST00000595558 SART3Q15020 963 aaKnown RBP17.4■□□□□ 0.38
ZNF541-205ENST00000595558 CTR9Q6PD62 1173 aa17.4■□□□□ 0.38
ZNF541-205ENST00000595558 CCNL1Q9UK58 526 aaPredicted RBP17.4■□□□□ 0.38
ZNF541-205ENST00000595558 DOCK2Q92608 1830 aa17.4■□□□□ 0.38
ZNF541-205ENST00000595558 ZNF804BA4D1E1 1349 aa17.4■□□□□ 0.38
ZNF541-205ENST00000595558 RNF225M0QZC1 329 aaPredicted RBP17.4■□□□□ 0.38
ZNF541-205ENST00000595558 CASP14P31944 242 aa17.4■□□□□ 0.38
ZNF541-205ENST00000595558 SMC1AQ14683 1233 aaKnown RBP17.4■□□□□ 0.38
ZNF541-205ENST00000595558 SF3B3Q15393 1217 aaKnown RBP17.4■□□□□ 0.38
ZNF541-205ENST00000595558 ZNF174Q15697 407 aa17.4■□□□□ 0.38
ZNF541-205ENST00000595558 FUT8Q9BYC5 575 aa17.4■□□□□ 0.38
ZNF541-205ENST00000595558 BLZF1Q9H2G9 400 aa17.4■□□□□ 0.38
ZNF541-205ENST00000595558 LRP5O75197 1615 aa17.4■□□□□ 0.38
ZNF541-205ENST00000595558 NID2Q14112 1375 aa17.39■□□□□ 0.38
ZNF541-205ENST00000595558 CCDC66A2RUB6 948 aa17.39■□□□□ 0.37
ZNF541-205ENST00000595558 GOLGA6L9A6NEM1 432 aa17.39■□□□□ 0.37
ZNF541-205ENST00000595558 ZPR1O75312 459 aa17.39■□□□□ 0.37
ZNF541-205ENST00000595558 CCDC175P0C221 793 aa17.39■□□□□ 0.37
ZNF541-205ENST00000595558 CCT6AP40227 531 aaKnown RBP17.39■□□□□ 0.37
ZNF541-205ENST00000595558 FXR1P51114 621 aaKnown RBP eCLIP17.39■□□□□ 0.37
ZNF541-205ENST00000595558 DIXDC1Q155Q3 683 aa17.39■□□□□ 0.37
ZNF541-205ENST00000595558 RASGRP2Q7LDG7 609 aa17.39■□□□□ 0.37
ZNF541-205ENST00000595558 TRIML1Q8N9V2 468 aa17.39■□□□□ 0.37
ZNF541-205ENST00000595558 SMARCC1Q92922 1105 aaPredicted RBP17.39■□□□□ 0.37
ZNF541-205ENST00000595558 ADD3Q9UEY8 706 aaKnown RBP17.39■□□□□ 0.37
ZNF541-205ENST00000595558 PNPLA7Q6ZV29 1317 aa17.39■□□□□ 0.37
ZNF541-205ENST00000595558 SYNRGQ9UMZ2 1314 aa17.39■□□□□ 0.37
ZNF541-205ENST00000595558 TIAM2Q8IVF5 1701 aa17.39■□□□□ 0.37
ZNF541-205ENST00000595558 A0A0U1RQG5 324 aaPredicted RBP17.39■□□□□ 0.37
ZNF541-205ENST00000595558 PPP1R3GB7ZBB8 358 aa17.39■□□□□ 0.37
ZNF541-205ENST00000595558 USP17L8P0C7I0 530 aa17.39■□□□□ 0.37
ZNF541-205ENST00000595558 ERCC5P28715 1186 aaPredicted RBP17.39■□□□□ 0.37
ZNF541-205ENST00000595558 TAF3Q5VWG9 929 aa17.39■□□□□ 0.37
ZNF541-205ENST00000595558 ACRBPQ8NEB7 543 aa17.39■□□□□ 0.37
ZNF541-205ENST00000595558 NSUN4Q96CB9 384 aaKnown RBP17.39■□□□□ 0.37
ZNF541-205ENST00000595558 NLRP3Q96P20 1036 aa17.39■□□□□ 0.37
ZNF541-205ENST00000595558 MYH2Q9UKX2 1941 aa17.39■□□□□ 0.37
ZNF541-205ENST00000595558 TRIM75PA6NK02 468 aa17.38■□□□□ 0.37
ZNF541-205ENST00000595558 TPM1P09493 284 aa17.38■□□□□ 0.37
ZNF541-205ENST00000595558 PBX1P40424 430 aa17.38■□□□□ 0.37
ZNF541-205ENST00000595558 SEC23AQ15436 765 aa17.38■□□□□ 0.37
ZNF541-205ENST00000595558 SPATA1Q5VX52 437 aa17.38■□□□□ 0.37
ZNF541-205ENST00000595558 CLEC4GQ6UXB4 293 aa17.38■□□□□ 0.37
ZNF541-205ENST00000595558 DYNLL2Q96FJ2 89 aa17.38■□□□□ 0.37
ZNF541-205ENST00000595558 ARAP2Q8WZ64 1704 aa17.38■□□□□ 0.37
ZNF541-205ENST00000595558 PHLPP1O60346 1717 aa17.38■□□□□ 0.37
ZNF541-205ENST00000595558 GYPCP04921 128 aa17.38■□□□□ 0.37
ZNF541-205ENST00000595558 RABGGTAQ92696 567 aa17.38■□□□□ 0.37
ZNF541-205ENST00000595558 PANX2Q96RD6 677 aa17.38■□□□□ 0.37
ZNF541-205ENST00000595558 ARFGAP3Q9NP61 516 aa17.38■□□□□ 0.37
ZNF541-205ENST00000595558 AHDC1Q5TGY3 1603 aaPredicted RBP17.37■□□□□ 0.37
ZNF541-205ENST00000595558 CICQ96RK0 1608 aaPredicted RBP17.37■□□□□ 0.37
ZNF541-205ENST00000595558 H3BQF6 201 aa17.37■□□□□ 0.37
ZNF541-205ENST00000595558 TM4SF1P30408 202 aa17.37■□□□□ 0.37
ZNF541-205ENST00000595558 UBE4AQ14139 1066 aa17.37■□□□□ 0.37
ZNF541-205ENST00000595558 CDKAL1Q5VV42 579 aa17.37■□□□□ 0.37
ZNF541-205ENST00000595558 SH3RF1Q7Z6J0 888 aa17.37■□□□□ 0.37
ZNF541-205ENST00000595558 PPFIBP1Q86W92 1011 aa17.37■□□□□ 0.37
ZNF541-205ENST00000595558 GOLGA1Q92805 767 aa17.37■□□□□ 0.37
ZNF541-205ENST00000595558 SUGCTQ9HAC7 445 aa17.37■□□□□ 0.37
ZNF541-205ENST00000595558 GNL3LQ9NVN8 582 aaKnown RBP17.37■□□□□ 0.37
ZNF541-205ENST00000595558 HIBADHP31937 336 aaKnown RBP17.37■□□□□ 0.37
ZNF541-205ENST00000595558 TXLNAP40222 546 aa17.37■□□□□ 0.37
ZNF541-205ENST00000595558 FUT2Q10981 343 aa17.37■□□□□ 0.37
ZNF541-205ENST00000595558 LONRF2Q1L5Z9 754 aa17.37■□□□□ 0.37
ZNF541-205ENST00000595558 ZNF569Q5MCW4 686 aa17.37■□□□□ 0.37
ZNF541-205ENST00000595558 KANK3Q6NY19 840 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms