RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 SYMPKQ92797 1274 aaKnown RBP15□□□□□ -0.01
VRK3-209ENST00000594948 TNFRSF25Q93038 417 aa15□□□□□ -0.01
VRK3-209ENST00000594948 TAOK2Q9UL54 1235 aa15□□□□□ -0.01
VRK3-209ENST00000594948 ASAP1Q9ULH1 1129 aa15□□□□□ -0.01
VRK3-209ENST00000594948 CACNA1SQ13698 1873 aa14.99□□□□□ -0.01
VRK3-209ENST00000594948 PRKAB2O43741 272 aa14.99□□□□□ -0.01
VRK3-209ENST00000594948 CASP14P31944 242 aa14.99□□□□□ -0.01
VRK3-209ENST00000594948 TRAPPC10P48553 1259 aa14.99□□□□□ -0.01
VRK3-209ENST00000594948 ATP2C1P98194 919 aaPredicted RBP14.99□□□□□ -0.01
VRK3-209ENST00000594948 KIF4BQ2VIQ3 1234 aa14.99□□□□□ -0.01
VRK3-209ENST00000594948 TMED8Q6PL24 325 aaPredicted RBP14.99□□□□□ -0.01
VRK3-209ENST00000594948 ANKRD20A12PQ8NF67 263 aa14.99□□□□□ -0.01
VRK3-209ENST00000594948 NUP133Q8WUM0 1156 aa14.99□□□□□ -0.01
VRK3-209ENST00000594948 EPSTI1Q96J88 318 aa14.99□□□□□ -0.01
VRK3-209ENST00000594948 ZKSCAN3Q9BRR0 538 aa14.99□□□□□ -0.01
VRK3-209ENST00000594948 IRX2Q9BZI1 471 aaPredicted RBP14.99□□□□□ -0.01
VRK3-209ENST00000594948 TOMM22Q9NS69 142 aa14.99□□□□□ -0.01
VRK3-209ENST00000594948 TMEM51Q9NW97 253 aa14.99□□□□□ -0.01
VRK3-209ENST00000594948 L1RE1Q9UN81 338 aa14.99□□□□□ -0.01
VRK3-209ENST00000594948 TNKSO95271 1327 aa14.99□□□□□ -0.01
VRK3-209ENST00000594948 SLIT2O94813 1529 aa14.99□□□□□ -0.01
VRK3-209ENST00000594948 BAZ2AQ9UIF9 1905 aaKnown RBP14.99□□□□□ -0.01
VRK3-209ENST00000594948 GTPBP6O43824 516 aaPredicted RBP14.99□□□□□ -0.01
VRK3-209ENST00000594948 IL6STP40189 918 aaPredicted RBP14.99□□□□□ -0.01
VRK3-209ENST00000594948 AFMP43652 599 aa14.99□□□□□ -0.01
VRK3-209ENST00000594948 SEMA3FQ13275 785 aa14.99□□□□□ -0.01
VRK3-209ENST00000594948 E2F4Q16254 413 aa14.99□□□□□ -0.01
VRK3-209ENST00000594948 SLC35F6Q8N357 371 aa14.99□□□□□ -0.01
VRK3-209ENST00000594948 SHISA4Q96DD7 197 aa14.99□□□□□ -0.01
VRK3-209ENST00000594948 ZCCHC17Q9NP64 241 aaKnown RBP14.99□□□□□ -0.01
VRK3-209ENST00000594948 RMND1Q9NWS8 449 aa14.99□□□□□ -0.01
VRK3-209ENST00000594948 ADAM21Q9UKJ8 722 aa14.99□□□□□ -0.01
VRK3-209ENST00000594948 CTAGE15A4D2H0 777 aa14.98□□□□□ -0.01
VRK3-209ENST00000594948 H3BQF6 201 aa14.98□□□□□ -0.01
VRK3-209ENST00000594948 DDAH1O94760 285 aa14.98□□□□□ -0.01
VRK3-209ENST00000594948 CTAGE8P0CG41 777 aa14.98□□□□□ -0.01
VRK3-209ENST00000594948 FXR1P51114 621 aaKnown RBP eCLIP14.98□□□□□ -0.01
VRK3-209ENST00000594948 STX17P56962 302 aa14.98□□□□□ -0.01
VRK3-209ENST00000594948 TTC38Q5R3I4 469 aa14.98□□□□□ -0.01
VRK3-209ENST00000594948 KLHL10Q6JEL2 608 aa14.98□□□□□ -0.01
VRK3-209ENST00000594948 CTAGE6Q86UF2 777 aa14.98□□□□□ -0.01
VRK3-209ENST00000594948 CTAGE4Q8IX94 777 aa14.98□□□□□ -0.01
VRK3-209ENST00000594948 ACBD3Q9H3P7 528 aa14.98□□□□□ -0.01
VRK3-209ENST00000594948 ABHD10Q9NUJ1 306 aa14.98□□□□□ -0.01
VRK3-209ENST00000594948 SOS2Q07890 1332 aaPredicted RBP14.98□□□□□ -0.01
VRK3-209ENST00000594948 BCL9O00512 1426 aa14.98□□□□□ -0.01
VRK3-209ENST00000594948 CICQ96RK0 1608 aaPredicted RBP14.98□□□□□ -0.01
VRK3-209ENST00000594948 WNK3Q9BYP7 1800 aa14.97□□□□□ -0.01
VRK3-209ENST00000594948 MYH1P12882 1939 aa14.97□□□□□ -0.01
VRK3-209ENST00000594948 RPS6KA5O75582 802 aa14.97□□□□□ -0.01
VRK3-209ENST00000594948 FGRP09769 529 aa14.97□□□□□ -0.01
VRK3-209ENST00000594948 ATP2B1P20020 1258 aa14.97□□□□□ -0.01
VRK3-209ENST00000594948 ARHGAP25P42331 645 aa14.97□□□□□ -0.01
VRK3-209ENST00000594948 COPB1P53618 953 aaKnown RBP14.97□□□□□ -0.01
VRK3-209ENST00000594948 RAD51AP2Q09MP3 1159 aa14.97□□□□□ -0.01
VRK3-209ENST00000594948 KRT31Q15323 416 aa14.97□□□□□ -0.01
VRK3-209ENST00000594948 ZSCAN26Q16670 478 aa14.97□□□□□ -0.01
VRK3-209ENST00000594948 WDR93Q6P2C0 686 aa14.97□□□□□ -0.01
VRK3-209ENST00000594948 ZNF662Q6ZS27 426 aa14.97□□□□□ -0.01
VRK3-209ENST00000594948 CATIPQ7Z7H3 387 aa14.97□□□□□ -0.01
VRK3-209ENST00000594948 CPLX3Q8WVH0 158 aa14.97□□□□□ -0.01
VRK3-209ENST00000594948 PNKPQ96T60 521 aa14.97□□□□□ -0.01
VRK3-209ENST00000594948 VPS54Q9P1Q0 977 aa14.97□□□□□ -0.01
VRK3-209ENST00000594948 PUF60Q9UHX1 559 aaKnown RBP14.97□□□□□ -0.01
VRK3-209ENST00000594948 CTNND2Q9UQB3 1225 aa14.97□□□□□ -0.01
VRK3-209ENST00000594948 XDHP47989 1333 aa14.97□□□□□ -0.01
VRK3-209ENST00000594948 SCN7AQ01118 1682 aa14.97□□□□□ -0.01
VRK3-209ENST00000594948 ERVK-24P63145 666 aa14.96□□□□□ -0.01
VRK3-209ENST00000594948 AMPD2Q01433 879 aa14.96□□□□□ -0.01
VRK3-209ENST00000594948 PAK1Q13153 545 aa14.96□□□□□ -0.01
VRK3-209ENST00000594948 ZNF658Q5TYW1 1059 aaPredicted RBP14.96□□□□□ -0.01
VRK3-209ENST00000594948 PDXDC2PQ6P474 469 aa14.96□□□□□ -0.01
VRK3-209ENST00000594948 BRINP3Q76B58 766 aa14.96□□□□□ -0.01
VRK3-209ENST00000594948 CCDC82Q8N4S0 544 aa14.96□□□□□ -0.01
VRK3-209ENST00000594948 ZSCAN10Q96SZ4 725 aaPredicted RBP14.96□□□□□ -0.01
VRK3-209ENST00000594948 FAM205CA6NFA0 338 aa14.96□□□□□ -0.01
VRK3-209ENST00000594948 N4BP3O15049 544 aa14.96□□□□□ -0.01
VRK3-209ENST00000594948 CAPN2P17655 700 aa14.96□□□□□ -0.01
VRK3-209ENST00000594948 MCM3P25205 808 aa14.96□□□□□ -0.01
VRK3-209ENST00000594948 ACTN2P35609 894 aa14.96□□□□□ -0.01
VRK3-209ENST00000594948 CMTR1Q8N1G2 835 aaKnown RBP14.96□□□□□ -0.01
VRK3-209ENST00000594948 ENAHQ8N8S7 591 aaPredicted RBP14.96□□□□□ -0.01
VRK3-209ENST00000594948 HELBQ8NG08 1087 aaPredicted RBP14.96□□□□□ -0.01
VRK3-209ENST00000594948 FAM71BQ8TC56 605 aa14.96□□□□□ -0.01
VRK3-209ENST00000594948 VIPAS39Q9H9C1 493 aa14.96□□□□□ -0.01
VRK3-209ENST00000594948 PODXL2Q9NZ53 605 aa14.96□□□□□ -0.01
VRK3-209ENST00000594948 CASZ1Q86V15 1759 aa14.95□□□□□ -0.02
VRK3-209ENST00000594948 IVLP07476 585 aa14.95□□□□□ -0.02
VRK3-209ENST00000594948 NPY5RQ15761 445 aa14.95□□□□□ -0.02
VRK3-209ENST00000594948 TCP11X2Q5H9J9 407 aa14.95□□□□□ -0.02
VRK3-209ENST00000594948 EARS2Q5JPH6 523 aaKnown RBP14.95□□□□□ -0.02
VRK3-209ENST00000594948 RRAGBQ5VZM2 374 aa14.95□□□□□ -0.02
VRK3-209ENST00000594948 ARL6IP4Q66PJ3 421 aaKnown RBP14.95□□□□□ -0.02
VRK3-209ENST00000594948 TMTC3Q6ZXV5 915 aa14.95□□□□□ -0.02
VRK3-209ENST00000594948 DZIP3Q86Y13 1208 aaKnown RBP14.95□□□□□ -0.02
VRK3-209ENST00000594948 ACRBPQ8NEB7 543 aa14.95□□□□□ -0.02
VRK3-209ENST00000594948 BRIP1Q9BX63 1249 aa14.95□□□□□ -0.02
VRK3-209ENST00000594948 ABCB6Q9NP58 842 aa14.95□□□□□ -0.02
VRK3-209ENST00000594948 MED4Q9NPJ6 270 aa14.95□□□□□ -0.02
VRK3-209ENST00000594948 LRP2BPQ9P2M1 347 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms