RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 SMC1AQ14683 1233 aaKnown RBP18.72■□□□□ 0.59
LIG1-206ENST00000594067 PLCH1Q4KWH8 1693 aa18.72■□□□□ 0.59
LIG1-206ENST00000594067 RAD9BQ6WBX8 426 aa18.72■□□□□ 0.59
LIG1-206ENST00000594067 C3orf67Q6ZVT6 689 aa18.72■□□□□ 0.59
LIG1-206ENST00000594067 BCL9LQ86UU0 1499 aa18.72■□□□□ 0.59
LIG1-206ENST00000594067 NEK11Q8NG66 645 aa18.72■□□□□ 0.59
LIG1-206ENST00000594067 CCDC12Q8WUD4 166 aaPredicted RBP18.72■□□□□ 0.59
LIG1-206ENST00000594067 ATRIPQ8WXE1 791 aa18.72■□□□□ 0.59
LIG1-206ENST00000594067 LZTFL1Q9NQ48 299 aa18.72■□□□□ 0.59
LIG1-206ENST00000594067 CAPN2P17655 700 aa18.71■□□□□ 0.59
LIG1-206ENST00000594067 PTGDRQ13258 359 aa18.71■□□□□ 0.59
LIG1-206ENST00000594067 NPY5RQ15761 445 aa18.71■□□□□ 0.59
LIG1-206ENST00000594067 ZNF384Q8TF68 577 aa18.71■□□□□ 0.59
LIG1-206ENST00000594067 RABGGTAQ92696 567 aa18.71■□□□□ 0.59
LIG1-206ENST00000594067 PANX2Q96RD6 677 aa18.71■□□□□ 0.59
LIG1-206ENST00000594067 FUT8Q9BYC5 575 aa18.71■□□□□ 0.59
LIG1-206ENST00000594067 BLZF1Q9H2G9 400 aa18.71■□□□□ 0.59
LIG1-206ENST00000594067 ARFGAP3Q9NP61 516 aa18.71■□□□□ 0.59
LIG1-206ENST00000594067 RBM28Q9NW13 759 aaKnown RBP18.71■□□□□ 0.59
LIG1-206ENST00000594067 ADD3Q9UEY8 706 aaKnown RBP18.71■□□□□ 0.59
LIG1-206ENST00000594067 LOC102724428A0A0B4J2F2 783 aa18.71■□□□□ 0.59
LIG1-206ENST00000594067 USP17L12C9JPN9 530 aa18.71■□□□□ 0.59
LIG1-206ENST00000594067 USP17L21D6R901 530 aa18.71■□□□□ 0.59
LIG1-206ENST00000594067 NMT2O60551 498 aa18.71■□□□□ 0.59
LIG1-206ENST00000594067 CCDC175P0C221 793 aa18.71■□□□□ 0.59
LIG1-206ENST00000594067 SIK1P57059 783 aa18.71■□□□□ 0.59
LIG1-206ENST00000594067 CTR9Q6PD62 1173 aa18.71■□□□□ 0.59
LIG1-206ENST00000594067 TMTC3Q6ZXV5 915 aa18.71■□□□□ 0.59
LIG1-206ENST00000594067 TNFRSF25Q93038 417 aa18.71■□□□□ 0.59
LIG1-206ENST00000594067 CTNND2Q9UQB3 1225 aa18.71■□□□□ 0.59
LIG1-206ENST00000594067 CDKAL1Q5VV42 579 aa18.7■□□□□ 0.58
LIG1-206ENST00000594067 ANKRD18AQ8IVF6 992 aa18.7■□□□□ 0.58
LIG1-206ENST00000594067 GSDMAQ96QA5 445 aa18.7■□□□□ 0.58
LIG1-206ENST00000594067 BRIP1Q9BX63 1249 aa18.7■□□□□ 0.58
LIG1-206ENST00000594067 CICQ96RK0 1608 aaPredicted RBP18.7■□□□□ 0.58
LIG1-206ENST00000594067 SRBD1Q8N5C6 995 aaKnown RBP18.7■□□□□ 0.58
LIG1-206ENST00000594067 MYH6P13533 1939 aa18.7■□□□□ 0.58
LIG1-206ENST00000594067 CNTNAP5Q8WYK1 1306 aa18.69■□□□□ 0.58
LIG1-206ENST00000594067 BMP15O95972 392 aa18.69■□□□□ 0.58
LIG1-206ENST00000594067 PBX1P40424 430 aa18.69■□□□□ 0.58
LIG1-206ENST00000594067 CT47A1Q5JQC4 288 aaPredicted RBP18.69■□□□□ 0.58
LIG1-206ENST00000594067 FAM47AQ5JRC9 791 aa18.69■□□□□ 0.58
LIG1-206ENST00000594067 ADGRG1Q9Y653 693 aa18.69■□□□□ 0.58
LIG1-206ENST00000594067 DUOX1Q9NRD9 1551 aa18.69■□□□□ 0.58
LIG1-206ENST00000594067 MYH2Q9UKX2 1941 aa18.69■□□□□ 0.58
LIG1-206ENST00000594067 CASP14P31944 242 aa18.69■□□□□ 0.58
LIG1-206ENST00000594067 ERFEQ4G0M1 354 aa18.69■□□□□ 0.58
LIG1-206ENST00000594067 CAVIN4Q5BKX8 364 aa18.69■□□□□ 0.58
LIG1-206ENST00000594067 PIK3AP1Q6ZUJ8 805 aa18.69■□□□□ 0.58
LIG1-206ENST00000594067 TXLNBQ8N3L3 684 aa18.69■□□□□ 0.58
LIG1-206ENST00000594067 XDHP47989 1333 aa18.69■□□□□ 0.58
LIG1-206ENST00000594067 ADAMTS3O15072 1205 aa18.68■□□□□ 0.58
LIG1-206ENST00000594067 CALM1P0DP23 149 aa18.68■□□□□ 0.58
LIG1-206ENST00000594067 CALM2P0DP24 149 aa18.68■□□□□ 0.58
LIG1-206ENST00000594067 CALM3P0DP25 149 aa18.68■□□□□ 0.58
LIG1-206ENST00000594067 VEGFAP15692 232 aaPredicted RBP18.68■□□□□ 0.58
LIG1-206ENST00000594067 CCT6AP40227 531 aaKnown RBP18.68■□□□□ 0.58
LIG1-206ENST00000594067 ATP2C1P98194 919 aaPredicted RBP18.68■□□□□ 0.58
LIG1-206ENST00000594067 FILIP1LQ4L180 1135 aa18.68■□□□□ 0.58
LIG1-206ENST00000594067 ZSWIM4Q9H7M6 989 aa18.68■□□□□ 0.58
LIG1-206ENST00000594067 DDAH1O94760 285 aa18.68■□□□□ 0.58
LIG1-206ENST00000594067 UBE4AQ14139 1066 aa18.68■□□□□ 0.58
LIG1-206ENST00000594067 FAM84BQ96KN1 310 aaPredicted RBP18.68■□□□□ 0.58
LIG1-206ENST00000594067 CTAGE1Q96RT6 745 aa18.68■□□□□ 0.58
LIG1-206ENST00000594067 MFAP3LO75121 409 aa18.67■□□□□ 0.58
LIG1-206ENST00000594067 MCM7P33993 719 aa18.67■□□□□ 0.58
LIG1-206ENST00000594067 NLRP5P59047 1200 aa18.67■□□□□ 0.58
LIG1-206ENST00000594067 RRAGBQ5VZM2 374 aa18.67■□□□□ 0.58
LIG1-206ENST00000594067 CTCFLQ8NI51 663 aaPredicted RBP18.67■□□□□ 0.58
LIG1-206ENST00000594067 GOLGA1Q92805 767 aa18.67■□□□□ 0.58
LIG1-206ENST00000594067 DOT1LQ8TEK3 1739 aa18.67■□□□□ 0.58
LIG1-206ENST00000594067 TXLNAP40222 546 aa18.67■□□□□ 0.58
LIG1-206ENST00000594067 FXR1P51114 621 aaKnown RBP eCLIP18.67■□□□□ 0.58
LIG1-206ENST00000594067 TRERF1Q96PN7 1200 aa18.67■□□□□ 0.58
LIG1-206ENST00000594067 MINPP1Q9UNW1 487 aa18.67■□□□□ 0.58
LIG1-206ENST00000594067 BAZ2AQ9UIF9 1905 aaKnown RBP18.67■□□□□ 0.58
LIG1-206ENST00000594067 GYPCP04921 128 aa18.67■□□□□ 0.58
LIG1-206ENST00000594067 FGRP09769 529 aa18.67■□□□□ 0.58
LIG1-206ENST00000594067 E2F4Q16254 413 aa18.67■□□□□ 0.58
LIG1-206ENST00000594067 IL17AQ16552 155 aa18.67■□□□□ 0.58
LIG1-206ENST00000594067 NAA15Q9BXJ9 866 aaKnown RBP18.67■□□□□ 0.58
LIG1-206ENST00000594067 PHLPP1O60346 1717 aa18.66■□□□□ 0.58
LIG1-206ENST00000594067 CYP2D6P10635 497 aa18.66■□□□□ 0.58
LIG1-206ENST00000594067 KLRK1P26718 216 aa18.66■□□□□ 0.58
LIG1-206ENST00000594067 DDB1Q16531 1140 aa18.66■□□□□ 0.58
LIG1-206ENST00000594067 LONRF2Q1L5Z9 754 aa18.66■□□□□ 0.58
LIG1-206ENST00000594067 SLC4A8Q2Y0W8 1093 aa18.66■□□□□ 0.58
LIG1-206ENST00000594067 MUM1L1Q5H9M0 696 aa18.66■□□□□ 0.58
LIG1-206ENST00000594067 IQUBQ8NA54 791 aa18.66■□□□□ 0.58
LIG1-206ENST00000594067 MTRQ99707 1265 aa18.66■□□□□ 0.58
LIG1-206ENST00000594067 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.66■□□□□ 0.58
LIG1-206ENST00000594067 CACNA1SQ13698 1873 aa18.66■□□□□ 0.58
LIG1-206ENST00000594067 CCDC151A5D8V7 595 aa18.66■□□□□ 0.58
LIG1-206ENST00000594067 RAD51AP2Q09MP3 1159 aa18.66■□□□□ 0.58
LIG1-206ENST00000594067 KRT31Q15323 416 aa18.66■□□□□ 0.58
LIG1-206ENST00000594067 CELF1Q92879 486 aaKnown RBP18.66■□□□□ 0.58
LIG1-206ENST00000594067 VPS16Q9H269 839 aa18.66■□□□□ 0.58
LIG1-206ENST00000594067 BSDC1Q9NW68 430 aaPredicted RBP18.66■□□□□ 0.58
LIG1-206ENST00000594067 MAP2K7O14733 419 aa18.65■□□□□ 0.58
LIG1-206ENST00000594067 SEMA3EO15041 775 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms