RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 PPP4R3BQ5MIZ7 849 aa23.14■■□□□ 1.29
LSM4-203ENST00000593829 VCPKMTQ9H867 229 aa23.14■■□□□ 1.29
LSM4-203ENST00000593829 NEDD4P46934 1319 aa23.13■■□□□ 1.29
LSM4-203ENST00000593829 TTLL1O95922 423 aa23.13■■□□□ 1.29
LSM4-203ENST00000593829 VCAM1P19320 739 aa23.13■■□□□ 1.29
LSM4-203ENST00000593829 ZNF296Q8WUU4 475 aaPredicted RBP23.13■■□□□ 1.29
LSM4-203ENST00000593829 LPAR1Q92633 364 aa23.13■■□□□ 1.29
LSM4-203ENST00000593829 ESR2Q92731 530 aa23.13■■□□□ 1.29
LSM4-203ENST00000593829 CLIP2Q9UDT6 1046 aa23.13■■□□□ 1.29
LSM4-203ENST00000593829 RBM8AQ9Y5S9 174 aaKnown RBP23.13■■□□□ 1.29
LSM4-203ENST00000593829 FKTNO75072 461 aa23.12■■□□□ 1.29
LSM4-203ENST00000593829 SMCR8Q8TEV9 937 aaPredicted RBP23.12■■□□□ 1.29
LSM4-203ENST00000593829 ASCC2Q9H1I8 757 aaPredicted RBP23.12■■□□□ 1.29
LSM4-203ENST00000593829 GOPCQ9HD26 462 aa23.12■■□□□ 1.29
LSM4-203ENST00000593829 CYP21A2P08686 494 aa23.12■■□□□ 1.29
LSM4-203ENST00000593829 IRX3P78415 501 aaPredicted RBP23.12■■□□□ 1.29
LSM4-203ENST00000593829 MKL1Q969V6 931 aa23.12■■□□□ 1.29
LSM4-203ENST00000593829 IL17RBQ9NRM6 502 aa23.12■■□□□ 1.29
LSM4-203ENST00000593829 ADGRA2Q96PE1 1338 aa23.11■■□□□ 1.29
LSM4-203ENST00000593829 USP17L15C9J2P7 530 aa23.11■■□□□ 1.29
LSM4-203ENST00000593829 USP17L13C9JLJ4 530 aa23.11■■□□□ 1.29
LSM4-203ENST00000593829 USP17L11C9JVI0 530 aa23.11■■□□□ 1.29
LSM4-203ENST00000593829 USP17L18D6R9N7 530 aa23.11■■□□□ 1.29
LSM4-203ENST00000593829 USP17L22D6RA61 530 aa23.11■■□□□ 1.29
LSM4-203ENST00000593829 USP17L17D6RBQ6 530 aa23.11■■□□□ 1.29
LSM4-203ENST00000593829 USP17L19D6RCP7 530 aa23.11■■□□□ 1.29
LSM4-203ENST00000593829 USP17L20D6RJB6 530 aa23.11■■□□□ 1.29
LSM4-203ENST00000593829 USP17L24Q0WX57 530 aa23.11■■□□□ 1.29
LSM4-203ENST00000593829 C17orf99Q6UX52 265 aa23.11■■□□□ 1.29
LSM4-203ENST00000593829 CNNM2Q9H8M5 875 aa23.11■■□□□ 1.29
LSM4-203ENST00000593829 SP3Q02447 781 aa23.1■■□□□ 1.29
LSM4-203ENST00000593829 KRT23Q9C075 422 aa23.1■■□□□ 1.29
LSM4-203ENST00000593829 RPAP3Q9H6T3 665 aaPredicted RBP23.1■■□□□ 1.29
LSM4-203ENST00000593829 TCP11L1Q9NUJ3 509 aa23.1■■□□□ 1.29
LSM4-203ENST00000593829 CPA4Q9UI42 421 aa23.1■■□□□ 1.29
LSM4-203ENST00000593829 SYNPO2Q9UMS6 1093 aa23.1■■□□□ 1.29
LSM4-203ENST00000593829 NMT2O60551 498 aa23.1■■□□□ 1.29
LSM4-203ENST00000593829 KIAA1755Q5JYT7 1200 aa23.1■■□□□ 1.29
LSM4-203ENST00000593829 SPICE1Q8N0Z3 855 aa23.1■■□□□ 1.29
LSM4-203ENST00000593829 STX8Q9UNK0 236 aa23.1■■□□□ 1.29
LSM4-203ENST00000593829 CATSPERGQ6ZRH7 1159 aa23.09■■□□□ 1.29
LSM4-203ENST00000593829 B4E1Z4 1266 aa23.08■■□□□ 1.29
LSM4-203ENST00000593829 RAD21O60216 631 aa23.08■■□□□ 1.29
LSM4-203ENST00000593829 KDM4AO75164 1064 aa23.08■■□□□ 1.29
LSM4-203ENST00000593829 TRDNQ13061 729 aa23.08■■□□□ 1.29
LSM4-203ENST00000593829 P2RX7Q99572 595 aaKnown RBP23.08■■□□□ 1.29
LSM4-203ENST00000593829 F5H6K3 240 aa23.08■■□□□ 1.28
LSM4-203ENST00000593829 WDR46O15213 610 aaKnown RBP23.08■■□□□ 1.28
LSM4-203ENST00000593829 GCLCP48506 637 aaPredicted RBP23.08■■□□□ 1.28
LSM4-203ENST00000593829 KLRC3Q07444 240 aa23.08■■□□□ 1.28
LSM4-203ENST00000593829 NKX2-3Q8TAU0 364 aa23.08■■□□□ 1.28
LSM4-203ENST00000593829 BCRP11274 1271 aa23.07■■□□□ 1.28
LSM4-203ENST00000593829 NOVP48745 357 aa23.07■■□□□ 1.28
LSM4-203ENST00000593829 NECTIN1Q15223 517 aa23.07■■□□□ 1.28
LSM4-203ENST00000593829 LRRC47Q8N1G4 583 aaKnown RBP23.07■■□□□ 1.28
LSM4-203ENST00000593829 TANGO6Q9C0B7 1094 aa23.07■■□□□ 1.28
LSM4-203ENST00000593829 CASP8AP2Q9UKL3 1982 aa23.07■■□□□ 1.28
LSM4-203ENST00000593829 HERVK_113P62684 666 aa23.06■■□□□ 1.28
LSM4-203ENST00000593829 IQCA1Q86XH1 822 aa23.06■■□□□ 1.28
LSM4-203ENST00000593829 GMCL1P1Q8NEA9 526 aa23.06■■□□□ 1.28
LSM4-203ENST00000593829 ERO1AQ96HE7 468 aa23.06■■□□□ 1.28
LSM4-203ENST00000593829 E7EWF7 191 aa23.06■■□□□ 1.28
LSM4-203ENST00000593829 SEC24BO95487 1268 aa23.06■■□□□ 1.28
LSM4-203ENST00000593829 GTF3C2Q8WUA4 911 aaPredicted RBP23.06■■□□□ 1.28
LSM4-203ENST00000593829 TBC1D32Q96NH3 1257 aa23.06■■□□□ 1.28
LSM4-203ENST00000593829 ZSWIM5Q9P217 1185 aa23.06■■□□□ 1.28
LSM4-203ENST00000593829 TAF6LQ9Y6J9 622 aa23.06■■□□□ 1.28
LSM4-203ENST00000593829 SLC27A2O14975 620 aa23.05■■□□□ 1.28
LSM4-203ENST00000593829 REC8O95072 547 aa23.05■■□□□ 1.28
LSM4-203ENST00000593829 NDUFB10O96000 172 aa23.05■■□□□ 1.28
LSM4-203ENST00000593829 CCDC178Q5BJE1 867 aa23.05■■□□□ 1.28
LSM4-203ENST00000593829 CREB3L3Q68CJ9 461 aa23.05■■□□□ 1.28
LSM4-203ENST00000593829 ANKRD13CQ8N6S4 541 aa23.05■■□□□ 1.28
LSM4-203ENST00000593829 TTC14Q96N46 770 aa23.05■■□□□ 1.28
LSM4-203ENST00000593829 UPF2Q9HAU5 1272 aaKnown RBP23.05■■□□□ 1.28
LSM4-203ENST00000593829 MYH4Q9Y623 1939 aa23.05■■□□□ 1.28
LSM4-203ENST00000593829 COG2Q14746 738 aa23.04■■□□□ 1.28
LSM4-203ENST00000593829 COL13A1Q5TAT6 717 aaPredicted RBP23.04■■□□□ 1.28
LSM4-203ENST00000593829 RNF20Q5VTR2 975 aa23.04■■□□□ 1.28
LSM4-203ENST00000593829 CD99L2Q8TCZ2 262 aa23.04■■□□□ 1.28
LSM4-203ENST00000593829 ZKSCAN3Q9BRR0 538 aa23.04■■□□□ 1.28
LSM4-203ENST00000593829 KIF22Q14807 665 aa23.04■■□□□ 1.28
LSM4-203ENST00000593829 RALYLQ86SE5 291 aaKnown RBP23.04■■□□□ 1.28
LSM4-203ENST00000593829 NCOA7Q8NI08 942 aa23.04■■□□□ 1.28
LSM4-203ENST00000593829 HOXC10Q9NYD6 342 aa23.04■■□□□ 1.28
LSM4-203ENST00000593829 TOP1P11387 765 aaKnown RBP23.03■■□□□ 1.28
LSM4-203ENST00000593829 LACTBP83111 547 aaPredicted RBP23.03■■□□□ 1.28
LSM4-203ENST00000593829 FAM110CQ1W6H9 321 aa23.03■■□□□ 1.28
LSM4-203ENST00000593829 FAM83BQ5T0W9 1011 aa23.03■■□□□ 1.28
LSM4-203ENST00000593829 SLFN13Q68D06 897 aa23.03■■□□□ 1.28
LSM4-203ENST00000593829 STOX1Q6ZVD7 989 aa23.03■■□□□ 1.28
LSM4-203ENST00000593829 DGKHQ86XP1 1220 aa23.03■■□□□ 1.28
LSM4-203ENST00000593829 ZSCAN10Q96SZ4 725 aaPredicted RBP23.03■■□□□ 1.28
LSM4-203ENST00000593829 TMEM47Q9BQJ4 181 aa23.03■■□□□ 1.28
LSM4-203ENST00000593829 FLOT1O75955 427 aa23.02■■□□□ 1.28
LSM4-203ENST00000593829 RCSD1Q6JBY9 416 aa23.02■■□□□ 1.28
LSM4-203ENST00000593829 UBAC1Q9BSL1 405 aa23.02■■□□□ 1.28
LSM4-203ENST00000593829 SPDYE16A6NNV3 312 aaPredicted RBP23.02■■□□□ 1.28
LSM4-203ENST00000593829 ARHGEF6Q15052 776 aa23.02■■□□□ 1.28
LSM4-203ENST00000593829 LBX2Q6XYB7 198 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms