RNA–Protein interactions for RNA: ENST00000593336.3

LINC01828-204, Transcript of long intergenic non-protein coding RNA 1828, humanhuman

TSL 5

Gene LINC01828, Length 750 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01828-204ENST00000593336 KLHDC4Q8TBB5 520 aa6.77□□□□□ -1.33
LINC01828-204ENST00000593336 KIAA1024Q9UPX6 916 aa6.77□□□□□ -1.33
LINC01828-204ENST00000593336 HDAC5Q9UQL6 1122 aa6.77□□□□□ -1.33
LINC01828-204ENST00000593336 HCN4Q9Y3Q4 1203 aa6.77□□□□□ -1.33
LINC01828-204ENST00000593336 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.77□□□□□ -1.33
LINC01828-204ENST00000593336 CACNA1FO60840 1977 aa6.77□□□□□ -1.33
LINC01828-204ENST00000593336 HMMRO75330 724 aa6.76□□□□□ -1.33
LINC01828-204ENST00000593336 CTSWP56202 376 aa6.76□□□□□ -1.33
LINC01828-204ENST00000593336 SF3B3Q15393 1217 aaKnown RBP6.76□□□□□ -1.33
LINC01828-204ENST00000593336 PRR5LQ6MZQ0 368 aa6.76□□□□□ -1.33
LINC01828-204ENST00000593336 TPTE2Q6XPS3 522 aa6.76□□□□□ -1.33
LINC01828-204ENST00000593336 NBPF5PQ86XG9 351 aaPredicted RBP6.76□□□□□ -1.33
LINC01828-204ENST00000593336 GCC1Q96CN9 775 aa6.76□□□□□ -1.33
LINC01828-204ENST00000593336 C11orf16Q9NQ32 467 aa6.76□□□□□ -1.33
LINC01828-204ENST00000593336 COPRSQ9NQ92 184 aa6.76□□□□□ -1.33
LINC01828-204ENST00000593336 PA2G4Q9UQ80 394 aaKnown RBP6.76□□□□□ -1.33
LINC01828-204ENST00000593336 EXOC6BQ9Y2D4 811 aa6.76□□□□□ -1.33
LINC01828-204ENST00000593336 ABCC12Q96J65 1359 aa6.76□□□□□ -1.33
LINC01828-204ENST00000593336 N4BP2Q86UW6 1770 aaPredicted RBP6.76□□□□□ -1.33
LINC01828-204ENST00000593336 EP400Q96L91 3159 aa6.76□□□□□ -1.33
LINC01828-204ENST00000593336 KAT6BQ8WYB5 2073 aa6.75□□□□□ -1.33
LINC01828-204ENST00000593336 UBR3Q6ZT12 1888 aa6.75□□□□□ -1.33
LINC01828-204ENST00000593336 KLRG2A4D1S0 409 aaPredicted RBP6.75□□□□□ -1.33
LINC01828-204ENST00000593336 HYAL3O43820 417 aaPredicted RBP6.75□□□□□ -1.33
LINC01828-204ENST00000593336 RAD21O60216 631 aa6.75□□□□□ -1.33
LINC01828-204ENST00000593336 PPP1R12BO60237 982 aaPredicted RBP6.75□□□□□ -1.33
LINC01828-204ENST00000593336 SURF6O75683 361 aaKnown RBP6.75□□□□□ -1.33
LINC01828-204ENST00000593336 SASH1O94885 1247 aa6.75□□□□□ -1.33
LINC01828-204ENST00000593336 MAP3K6O95382 1288 aa6.75□□□□□ -1.33
LINC01828-204ENST00000593336 MMP10P09238 476 aa6.75□□□□□ -1.33
LINC01828-204ENST00000593336 MSL1Q68DK7 614 aa6.75□□□□□ -1.33
LINC01828-204ENST00000593336 ATG9AQ7Z3C6 839 aa6.75□□□□□ -1.33
LINC01828-204ENST00000593336 SLC51AQ86UW1 340 aa6.75□□□□□ -1.33
LINC01828-204ENST00000593336 C16orf71Q8IYS4 520 aaPredicted RBP6.75□□□□□ -1.33
LINC01828-204ENST00000593336 ALDH16A1Q8IZ83 802 aa6.75□□□□□ -1.33
LINC01828-204ENST00000593336 POM121Q96HA1 1249 aa6.75□□□□□ -1.33
LINC01828-204ENST00000593336 ZNF594Q96JF6 807 aaPredicted RBP6.75□□□□□ -1.33
LINC01828-204ENST00000593336 C2orf49Q9BVC5 232 aaPredicted RBP6.75□□□□□ -1.33
LINC01828-204ENST00000593336 GSX2Q9BZM3 304 aa6.75□□□□□ -1.33
LINC01828-204ENST00000593336 NYXQ9GZU5 481 aa6.75□□□□□ -1.33
LINC01828-204ENST00000593336 GREM2Q9H772 168 aa6.75□□□□□ -1.33
LINC01828-204ENST00000593336 SEC31BQ9NQW1 1179 aa6.75□□□□□ -1.33
LINC01828-204ENST00000593336 FRRS1LQ9P0K9 344 aa6.75□□□□□ -1.33
LINC01828-204ENST00000593336 SCN7AQ01118 1682 aa6.74□□□□□ -1.33
LINC01828-204ENST00000593336 CARMIL3Q8ND23 1372 aa6.74□□□□□ -1.33
LINC01828-204ENST00000593336 C21orf2O43822 256 aa6.74□□□□□ -1.33
LINC01828-204ENST00000593336 ATP9BO43861 1147 aa6.74□□□□□ -1.33
LINC01828-204ENST00000593336 SMARCA5O60264 1052 aaPredicted RBP6.74□□□□□ -1.33
LINC01828-204ENST00000593336 RGS9O75916 674 aaPredicted RBP6.74□□□□□ -1.33
LINC01828-204ENST00000593336 LRRC24Q50LG9 513 aa6.74□□□□□ -1.33
LINC01828-204ENST00000593336 LCE3BQ5TA77 95 aa6.74□□□□□ -1.33
LINC01828-204ENST00000593336 ANKRD45Q5TZF3 282 aa6.74□□□□□ -1.33
LINC01828-204ENST00000593336 PSAPL1Q6NUJ1 521 aa6.74□□□□□ -1.33
LINC01828-204ENST00000593336 CHD1LQ86WJ1 897 aa6.74□□□□□ -1.33
LINC01828-204ENST00000593336 OGFOD1Q8N543 542 aa6.74□□□□□ -1.33
LINC01828-204ENST00000593336 ADAMTS19Q8TE59 1207 aa6.74□□□□□ -1.33
LINC01828-204ENST00000593336 TP53INP1Q96A56 240 aa6.74□□□□□ -1.33
LINC01828-204ENST00000593336 PUS3Q9BZE2 481 aaKnown RBP6.74□□□□□ -1.33
LINC01828-204ENST00000593336 DNAJB12Q9NXW2 375 aaKnown RBP6.74□□□□□ -1.33
LINC01828-204ENST00000593336 RBM19Q9Y4C8 960 aaKnown RBP6.74□□□□□ -1.33
LINC01828-204ENST00000593336 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.74□□□□□ -1.33
LINC01828-204ENST00000593336 BCORQ6W2J9 1755 aa6.74□□□□□ -1.33
LINC01828-204ENST00000593336 C4AP0C0L4 1744 aa6.73□□□□□ -1.33
LINC01828-204ENST00000593336 RTL9Q8NET4 1388 aa6.73□□□□□ -1.33
LINC01828-204ENST00000593336 EYA2O00167 538 aa6.73□□□□□ -1.33
LINC01828-204ENST00000593336 RAB11FIP3O75154 756 aa6.73□□□□□ -1.33
LINC01828-204ENST00000593336 DKK1O94907 266 aa6.73□□□□□ -1.33
LINC01828-204ENST00000593336 CCINQ13939 588 aa6.73□□□□□ -1.33
LINC01828-204ENST00000593336 R3HDM1Q15032 1099 aaKnown RBP6.73□□□□□ -1.33
LINC01828-204ENST00000593336 RTN1Q16799 776 aa6.73□□□□□ -1.33
LINC01828-204ENST00000593336 CRY2Q49AN0 593 aa6.73□□□□□ -1.33
LINC01828-204ENST00000593336 SHISA2Q6UWI4 295 aa6.73□□□□□ -1.33
LINC01828-204ENST00000593336 FBXO11Q86XK2 927 aa6.73□□□□□ -1.33
LINC01828-204ENST00000593336 CNBD1Q8NA66 436 aa6.73□□□□□ -1.33
LINC01828-204ENST00000593336 OTUD7AQ8TE49 926 aaPredicted RBP6.73□□□□□ -1.33
LINC01828-204ENST00000593336 PNMA5Q96PV4 448 aa6.73□□□□□ -1.33
LINC01828-204ENST00000593336 SIL1Q9H173 461 aa6.73□□□□□ -1.33
LINC01828-204ENST00000593336 NAGPAQ9UK23 515 aa6.73□□□□□ -1.33
LINC01828-204ENST00000593336 RIPOR2Q9Y4F9 1068 aa6.73□□□□□ -1.33
LINC01828-204ENST00000593336 NUP98P52948 1817 aa6.73□□□□□ -1.33
LINC01828-204ENST00000593336 SALL3Q9BXA9 1300 aa6.73□□□□□ -1.33
LINC01828-204ENST00000593336 COL4A1P02462 1669 aa6.72□□□□□ -1.33
LINC01828-204ENST00000593336 ANKRD18BA2A2Z9 1011 aa6.72□□□□□ -1.33
LINC01828-204ENST00000593336 TGFBR3LH3BV60 316 aa6.72□□□□□ -1.33
LINC01828-204ENST00000593336 CIAO1O76071 339 aa6.72□□□□□ -1.33
LINC01828-204ENST00000593336 HSP90B1P14625 803 aaKnown RBP6.72□□□□□ -1.33
LINC01828-204ENST00000593336 EPB42P16452 691 aa6.72□□□□□ -1.33
LINC01828-204ENST00000593336 HOXA10P31260 410 aaPredicted RBP6.72□□□□□ -1.33
LINC01828-204ENST00000593336 TFCP2Q12800 502 aa6.72□□□□□ -1.33
LINC01828-204ENST00000593336 G3BP1Q13283 466 aaKnown RBP eCLIP6.72□□□□□ -1.33
LINC01828-204ENST00000593336 IFIT5Q13325 482 aaKnown RBP6.72□□□□□ -1.33
LINC01828-204ENST00000593336 CCDC57Q2TAC2 916 aa6.72□□□□□ -1.33
LINC01828-204ENST00000593336 CCDC152Q4G0S7 254 aa6.72□□□□□ -1.33
LINC01828-204ENST00000593336 HSP90AB4PQ58FF6 505 aa6.72□□□□□ -1.33
LINC01828-204ENST00000593336 TSEN2Q8NCE0 465 aaKnown RBP6.72□□□□□ -1.33
LINC01828-204ENST00000593336 NUDT8Q8WV74 236 aa6.72□□□□□ -1.33
LINC01828-204ENST00000593336 TTC9Q92623 222 aa6.72□□□□□ -1.33
LINC01828-204ENST00000593336 CELF1Q92879 486 aaKnown RBP6.72□□□□□ -1.33
LINC01828-204ENST00000593336 EAF2Q96CJ1 260 aaPredicted RBP6.72□□□□□ -1.33
LINC01828-204ENST00000593336 KIF1BPQ96EK5 621 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms