RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 MYCLP12524 364 aaPredicted RBP14.18□□□□□ -0.14
DNMT1-228ENST00000592705 PDIA3P30101 505 aaKnown RBP14.18□□□□□ -0.14
DNMT1-228ENST00000592705 GTF2A1P52655 376 aaPredicted RBP14.18□□□□□ -0.14
DNMT1-228ENST00000592705 TUBB8Q3ZCM7 444 aa14.18□□□□□ -0.14
DNMT1-228ENST00000592705 RASSF4Q9H2L5 321 aa14.18□□□□□ -0.14
DNMT1-228ENST00000592705 PYCARDQ9ULZ3 195 aa14.18□□□□□ -0.14
DNMT1-228ENST00000592705 HECW2Q9P2P5 1572 aa14.18□□□□□ -0.14
DNMT1-228ENST00000592705 TAB2Q9NYJ8 693 aa14.18□□□□□ -0.14
DNMT1-228ENST00000592705 RTEL1Q9NZ71 1219 aa14.18□□□□□ -0.14
DNMT1-228ENST00000592705 ROBO2Q9HCK4 1378 aa14.17□□□□□ -0.14
DNMT1-228ENST00000592705 SCNN1DP51172 638 aa14.17□□□□□ -0.14
DNMT1-228ENST00000592705 NELFBQ8WX92 580 aa14.17□□□□□ -0.14
DNMT1-228ENST00000592705 FERMT1Q9BQL6 677 aa14.17□□□□□ -0.14
DNMT1-228ENST00000592705 TRIM6Q9C030 488 aaPredicted RBP14.17□□□□□ -0.14
DNMT1-228ENST00000592705 GPR108Q9NPR9 543 aa14.17□□□□□ -0.14
DNMT1-228ENST00000592705 ATP2C2O75185 946 aa14.17□□□□□ -0.14
DNMT1-228ENST00000592705 KCTD2Q14681 263 aa14.17□□□□□ -0.14
DNMT1-228ENST00000592705 TSC1Q92574 1164 aa14.17□□□□□ -0.14
DNMT1-228ENST00000592705 IQCDQ96DY2 449 aa14.17□□□□□ -0.14
DNMT1-228ENST00000592705 A0A1W2PRG0 241 aa14.17□□□□□ -0.14
DNMT1-228ENST00000592705 C21orf2O43822 256 aa14.17□□□□□ -0.14
DNMT1-228ENST00000592705 ZEB2O60315 1214 aa14.17□□□□□ -0.14
DNMT1-228ENST00000592705 TRMT44Q8IYL2 757 aaKnown RBP14.17□□□□□ -0.14
DNMT1-228ENST00000592705 MAPK8IP1Q9UQF2 711 aa14.17□□□□□ -0.14
DNMT1-228ENST00000592705 USP6P35125 1406 aa14.17□□□□□ -0.14
DNMT1-228ENST00000592705 DNM2P50570 870 aa14.17□□□□□ -0.14
DNMT1-228ENST00000592705 C8orf74Q6P047 294 aa14.17□□□□□ -0.14
DNMT1-228ENST00000592705 HOMER2Q9NSB8 354 aa14.17□□□□□ -0.14
DNMT1-228ENST00000592705 BRD3Q15059 726 aa14.16□□□□□ -0.14
DNMT1-228ENST00000592705 VPS72Q15906 364 aa14.16□□□□□ -0.14
DNMT1-228ENST00000592705 KRT25Q7Z3Z0 450 aa14.16□□□□□ -0.14
DNMT1-228ENST00000592705 ZBTB38Q8NAP3 1195 aaPredicted RBP14.16□□□□□ -0.14
DNMT1-228ENST00000592705 CCNT1O60563 726 aaKnown RBP14.16□□□□□ -0.14
DNMT1-228ENST00000592705 ETF1P62495 437 aaKnown RBP14.16□□□□□ -0.14
DNMT1-228ENST00000592705 TTC14Q96N46 770 aa14.16□□□□□ -0.14
DNMT1-228ENST00000592705 LZTS2Q9BRK4 669 aa14.16□□□□□ -0.14
DNMT1-228ENST00000592705 NDUFA8P51970 172 aa14.16□□□□□ -0.14
DNMT1-228ENST00000592705 CCDC26Q8TAB7 109 aa14.16□□□□□ -0.14
DNMT1-228ENST00000592705 TGFBRAP1Q8WUH2 860 aa14.16□□□□□ -0.14
DNMT1-228ENST00000592705 NOX5Q96PH1 765 aa14.16□□□□□ -0.14
DNMT1-228ENST00000592705 SYNCQ9H7C4 482 aa14.16□□□□□ -0.14
DNMT1-228ENST00000592705 MTRF1LQ9UGC7 380 aaKnown RBP14.16□□□□□ -0.14
DNMT1-228ENST00000592705 PRDM1O75626 825 aa14.16□□□□□ -0.14
DNMT1-228ENST00000592705 FMNL1O95466 1100 aaPredicted RBP14.16□□□□□ -0.14
DNMT1-228ENST00000592705 OAS2P29728 719 aaKnown RBP14.16□□□□□ -0.14
DNMT1-228ENST00000592705 FAM212AQ96EL1 285 aa14.16□□□□□ -0.14
DNMT1-228ENST00000592705 PKD2L1Q9P0L9 805 aa14.16□□□□□ -0.14
DNMT1-228ENST00000592705 ZNF215Q9UL58 517 aaPredicted RBP14.16□□□□□ -0.14
DNMT1-228ENST00000592705 POLA2Q14181 598 aa14.15□□□□□ -0.14
DNMT1-228ENST00000592705 C10orf67Q8IYJ2 551 aa14.15□□□□□ -0.14
DNMT1-228ENST00000592705 CLTCL1P53675 1640 aa14.15□□□□□ -0.14
DNMT1-228ENST00000592705 EFCAB8A8MWE9 144 aa14.15□□□□□ -0.14
DNMT1-228ENST00000592705 PCCAP05165 728 aaPredicted RBP14.15□□□□□ -0.14
DNMT1-228ENST00000592705 RAPGEF1Q13905 1077 aa14.15□□□□□ -0.14
DNMT1-228ENST00000592705 NONOQ15233 471 aaKnown RBP eCLIP14.15□□□□□ -0.145e-6■■■■□ 19.7
DNMT1-228ENST00000592705 GNPTABQ3T906 1256 aa14.15□□□□□ -0.14
DNMT1-228ENST00000592705 DNAJC21Q5F1R6 531 aaKnown RBP14.15□□□□□ -0.14
DNMT1-228ENST00000592705 NCAPG2Q86XI2 1143 aa14.15□□□□□ -0.14
DNMT1-228ENST00000592705 ANKRD35Q8N283 1001 aa14.15□□□□□ -0.14
DNMT1-228ENST00000592705 GPATCH11Q8N954 259 aa14.15□□□□□ -0.14
DNMT1-228ENST00000592705 FBXO18Q8NFZ0 1043 aa14.15□□□□□ -0.14
DNMT1-228ENST00000592705 RPGRIP1Q96KN7 1286 aa14.15□□□□□ -0.14
DNMT1-228ENST00000592705 PPP2R2CQ9Y2T4 447 aa14.15□□□□□ -0.14
DNMT1-228ENST00000592705 IKBKGQ9Y6K9 419 aa14.15□□□□□ -0.14
DNMT1-228ENST00000592705 ZNF804BA4D1E1 1349 aa14.15□□□□□ -0.14
DNMT1-228ENST00000592705 HOXD10P28358 340 aa14.15□□□□□ -0.14
DNMT1-228ENST00000592705 ACTN2P35609 894 aa14.15□□□□□ -0.14
DNMT1-228ENST00000592705 ADKP55263 362 aaKnown RBP14.15□□□□□ -0.14
DNMT1-228ENST00000592705 PPARAQ07869 468 aa14.15□□□□□ -0.14
DNMT1-228ENST00000592705 TICAM2Q86XR7 235 aa14.15□□□□□ -0.14
DNMT1-228ENST00000592705 ZNF354CQ86Y25 554 aa14.15□□□□□ -0.14
DNMT1-228ENST00000592705 ZNF654Q8IZM8 581 aa14.15□□□□□ -0.14
DNMT1-228ENST00000592705 DBNDD1Q9H9R9 158 aa14.15□□□□□ -0.14
DNMT1-228ENST00000592705 DBNLQ9UJU6 430 aaKnown RBP14.15□□□□□ -0.14
DNMT1-228ENST00000592705 PABPN1LA6NDY0 278 aaKnown RBP14.15□□□□□ -0.14
DNMT1-228ENST00000592705 FGAP02671 866 aa14.15□□□□□ -0.14
DNMT1-228ENST00000592705 WHAMMP3Q1A5X7 153 aa14.15□□□□□ -0.14
DNMT1-228ENST00000592705 ZMYM1Q5SVZ6 1142 aa14.15□□□□□ -0.14
DNMT1-228ENST00000592705 IFT20Q8IY31 132 aa14.15□□□□□ -0.14
DNMT1-228ENST00000592705 EPB41P11171 864 aaKnown RBP14.14□□□□□ -0.15
DNMT1-228ENST00000592705 B4GALNT4Q76KP1 1039 aa14.14□□□□□ -0.15
DNMT1-228ENST00000592705 CPLX4Q7Z7G2 160 aa14.14□□□□□ -0.15
DNMT1-228ENST00000592705 SELENOSQ9BQE4 189 aa14.14□□□□□ -0.15
DNMT1-228ENST00000592705 SLF1Q9BQI6 1058 aa14.14□□□□□ -0.15
DNMT1-228ENST00000592705 MYCP01106 439 aaPredicted RBP14.14□□□□□ -0.15
DNMT1-228ENST00000592705 NAP1L3Q99457 506 aaPredicted RBP14.14□□□□□ -0.15
DNMT1-228ENST00000592705 VPS54Q9P1Q0 977 aa14.14□□□□□ -0.15
DNMT1-228ENST00000592705 CROCC2H7BZ55 1655 aa14.14□□□□□ -0.15
DNMT1-228ENST00000592705 CLRN2A0PK11 232 aa14.14□□□□□ -0.15
DNMT1-228ENST00000592705 BCAMP50895 628 aa14.14□□□□□ -0.15
DNMT1-228ENST00000592705 IFNL3Q8IZI9 196 aa14.14□□□□□ -0.15
DNMT1-228ENST00000592705 TSKSQ9UJT2 592 aa14.14□□□□□ -0.15
DNMT1-228ENST00000592705 CLIC4Q9Y696 253 aa14.14□□□□□ -0.15
DNMT1-228ENST00000592705 ARAP3Q8WWN8 1544 aa14.14□□□□□ -0.15
DNMT1-228ENST00000592705 ZCCHC11Q5TAX3 1644 aaKnown RBP14.14□□□□□ -0.15
DNMT1-228ENST00000592705 MED23Q9ULK4 1368 aa14.14□□□□□ -0.15
DNMT1-228ENST00000592705 OVOS2A0A0G2JMS6 1433 aa14.14□□□□□ -0.15
DNMT1-228ENST00000592705 OVOS2A0A0J9YW53 1432 aa14.14□□□□□ -0.15
DNMT1-228ENST00000592705 OVOS2Q6IE36 1432 aa14.14□□□□□ -0.15
DNMT1-228ENST00000592705 GOLGA6CA6NDK9 693 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms