RNA–Protein interactions for RNA: ENST00000592632.5

DDX39A-218, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-218ENST00000592632 VCPKMTQ9H867 229 aa15.42■□□□□ 0.06
DDX39A-218ENST00000592632 MTMR4Q9NYA4 1195 aa15.42■□□□□ 0.06
DDX39A-218ENST00000592632 RAD50Q92878 1312 aa15.42■□□□□ 0.06
DDX39A-218ENST00000592632 SLC34A2O95436 690 aa15.41■□□□□ 0.06
DDX39A-218ENST00000592632 TSPY3P0CV98 308 aa15.41■□□□□ 0.06
DDX39A-218ENST00000592632 TSPY8P0CW00 308 aa15.41■□□□□ 0.06
DDX39A-218ENST00000592632 GCLCP48506 637 aaPredicted RBP15.41■□□□□ 0.06
DDX39A-218ENST00000592632 HERVK_113P62684 666 aa15.41■□□□□ 0.06
DDX39A-218ENST00000592632 IRX3P78415 501 aaPredicted RBP15.41■□□□□ 0.06
DDX39A-218ENST00000592632 AKNAD1Q5T1N1 836 aa15.41■□□□□ 0.06
DDX39A-218ENST00000592632 TBC1D10CQ8IV04 446 aa15.41■□□□□ 0.06
DDX39A-218ENST00000592632 ANKRD13CQ8N6S4 541 aa15.41■□□□□ 0.06
DDX39A-218ENST00000592632 RPAP3Q9H6T3 665 aaPredicted RBP15.41■□□□□ 0.06
DDX39A-218ENST00000592632 EFCC1Q9HA90 598 aa15.41■□□□□ 0.06
DDX39A-218ENST00000592632 IL17RBQ9NRM6 502 aa15.41■□□□□ 0.06
DDX39A-218ENST00000592632 RBPJLQ9UBG7 517 aa15.41■□□□□ 0.06
DDX39A-218ENST00000592632 CLIP2Q9UDT6 1046 aa15.41■□□□□ 0.06
DDX39A-218ENST00000592632 TRIM17Q9Y577 477 aa15.41■□□□□ 0.06
DDX39A-218ENST00000592632 PLIN4Q96Q06 1357 aa15.4■□□□□ 0.06
DDX39A-218ENST00000592632 ZNF213O14771 459 aa15.4■□□□□ 0.06
DDX39A-218ENST00000592632 RANBP6O60518 1105 aaKnown RBP15.4■□□□□ 0.06
DDX39A-218ENST00000592632 PEX10O60683 326 aa15.4■□□□□ 0.06
DDX39A-218ENST00000592632 PSMC4P43686 418 aa15.4■□□□□ 0.06
DDX39A-218ENST00000592632 SPICE1Q8N0Z3 855 aa15.4■□□□□ 0.06
DDX39A-218ENST00000592632 STAG1Q8WVM7 1258 aa15.4■□□□□ 0.06
DDX39A-218ENST00000592632 LPAR1Q92633 364 aa15.4■□□□□ 0.06
DDX39A-218ENST00000592632 TRIM47Q96LD4 638 aa15.4■□□□□ 0.06
DDX39A-218ENST00000592632 SH2D4AQ9H788 454 aa15.4■□□□□ 0.06
DDX39A-218ENST00000592632 TXNRD2Q9NNW7 524 aa15.4■□□□□ 0.06
DDX39A-218ENST00000592632 CTNNA3Q9UI47 895 aa15.4■□□□□ 0.06
DDX39A-218ENST00000592632 HTTP42858 3142 aa15.4■□□□□ 0.06
DDX39A-218ENST00000592632 KIAA0100Q14667 2235 aaKnown RBP15.4■□□□□ 0.06
DDX39A-218ENST00000592632 MYH4Q9Y623 1939 aa15.39■□□□□ 0.05
DDX39A-218ENST00000592632 ZSWIM8A7E2V4 1837 aa15.39■□□□□ 0.05
DDX39A-218ENST00000592632 F5H6K3 240 aa15.39■□□□□ 0.05
DDX39A-218ENST00000592632 NMT2O60551 498 aa15.39■□□□□ 0.05
DDX39A-218ENST00000592632 ECM2O94769 699 aaPredicted RBP15.39■□□□□ 0.05
DDX39A-218ENST00000592632 KLRC3Q07444 240 aa15.39■□□□□ 0.05
DDX39A-218ENST00000592632 KIF22Q14807 665 aa15.39■□□□□ 0.05
DDX39A-218ENST00000592632 FAM110CQ1W6H9 321 aa15.39■□□□□ 0.05
DDX39A-218ENST00000592632 RRP12Q5JTH9 1297 aaKnown RBP15.39■□□□□ 0.05
DDX39A-218ENST00000592632 FBXO46Q6PJ61 603 aaPredicted RBP15.39■□□□□ 0.05
DDX39A-218ENST00000592632 MFSD6Q6ZSS7 791 aa15.39■□□□□ 0.05
DDX39A-218ENST00000592632 MORF4L1Q9UBU8 362 aa15.39■□□□□ 0.05
DDX39A-218ENST00000592632 RLFQ13129 1914 aa15.39■□□□□ 0.05
DDX39A-218ENST00000592632 TSPY2A6NKD2 308 aa15.38■□□□□ 0.05
DDX39A-218ENST00000592632 TTLL1O95922 423 aa15.38■□□□□ 0.05
DDX39A-218ENST00000592632 PCP11498 1178 aaKnown RBP15.38■□□□□ 0.05
DDX39A-218ENST00000592632 NOVP48745 357 aa15.38■□□□□ 0.05
DDX39A-218ENST00000592632 COG2Q14746 738 aa15.38■□□□□ 0.05
DDX39A-218ENST00000592632 ARHGEF6Q15052 776 aa15.38■□□□□ 0.05
DDX39A-218ENST00000592632 Q3C1V9 767 aa15.38■□□□□ 0.05
DDX39A-218ENST00000592632 MAP4K1Q92918 833 aa15.38■□□□□ 0.05
DDX39A-218ENST00000592632 ESYT1Q9BSJ8 1104 aa15.38■□□□□ 0.05
DDX39A-218ENST00000592632 GOPCQ9HD26 462 aa15.38■□□□□ 0.05
DDX39A-218ENST00000592632 TOMM22Q9NS69 142 aa15.38■□□□□ 0.05
DDX39A-218ENST00000592632 PTPN22Q9Y2R2 807 aa15.38■□□□□ 0.05
DDX39A-218ENST00000592632 MGAMO43451 1857 aa15.37■□□□□ 0.05
DDX39A-218ENST00000592632 SPDYE16A6NNV3 312 aaPredicted RBP15.37■□□□□ 0.05
DDX39A-218ENST00000592632 WDR46O15213 610 aaKnown RBP15.37■□□□□ 0.05
DDX39A-218ENST00000592632 CNMDO75829 334 aa15.37■□□□□ 0.05
DDX39A-218ENST00000592632 FMNL1O95466 1100 aaPredicted RBP15.37■□□□□ 0.05
DDX39A-218ENST00000592632 NDUFB10O96000 172 aa15.37■□□□□ 0.05
DDX39A-218ENST00000592632 IMMTQ16891 758 aaKnown RBP15.37■□□□□ 0.05
DDX39A-218ENST00000592632 LBX2Q6XYB7 198 aa15.37■□□□□ 0.05
DDX39A-218ENST00000592632 RNF41Q9H4P4 317 aaPredicted RBP15.37■□□□□ 0.05
DDX39A-218ENST00000592632 TCP11L1Q9NUJ3 509 aa15.37■□□□□ 0.05
DDX39A-218ENST00000592632 HOXC10Q9NYD6 342 aa15.37■□□□□ 0.05
DDX39A-218ENST00000592632 RABGAP1Q9Y3P9 1069 aa15.37■□□□□ 0.05
DDX39A-218ENST00000592632 U3KPZ7 1027 aaPredicted RBP15.37■□□□□ 0.05
DDX39A-218ENST00000592632 NEDD4P46934 1319 aa15.37■□□□□ 0.05
DDX39A-218ENST00000592632 GNRH1P01148 92 aa15.36■□□□□ 0.05
DDX39A-218ENST00000592632 DSG3P32926 999 aa15.36■□□□□ 0.05
DDX39A-218ENST00000592632 LRRC47Q8N1G4 583 aaKnown RBP15.36■□□□□ 0.05
DDX39A-218ENST00000592632 GPRC5AQ8NFJ5 357 aa15.36■□□□□ 0.05
DDX39A-218ENST00000592632 GTF3C2Q8WUA4 911 aaPredicted RBP15.36■□□□□ 0.05
DDX39A-218ENST00000592632 NUP88Q99567 741 aaPredicted RBP15.36■□□□□ 0.05
DDX39A-218ENST00000592632 TANGO6Q9C0B7 1094 aa15.36■□□□□ 0.05
DDX39A-218ENST00000592632 LSG1Q9H089 658 aaKnown RBP15.36■□□□□ 0.05
DDX39A-218ENST00000592632 FBXO28Q9NVF7 368 aa15.36■□□□□ 0.05
DDX39A-218ENST00000592632 BTBD7Q9P203 1132 aa15.36■□□□□ 0.05
DDX39A-218ENST00000592632 SYNPO2Q9UMS6 1093 aa15.36■□□□□ 0.05
DDX39A-218ENST00000592632 LAMA4Q16363 1823 aa15.36■□□□□ 0.05
DDX39A-218ENST00000592632 RAD21O60216 631 aa15.35■□□□□ 0.05
DDX39A-218ENST00000592632 CYP21A2P08686 494 aa15.35■□□□□ 0.05
DDX39A-218ENST00000592632 FCGRTP55899 365 aa15.35■□□□□ 0.05
DDX39A-218ENST00000592632 ERVK-9P63128 1117 aa15.35■□□□□ 0.05
DDX39A-218ENST00000592632 ERVK-24P63145 666 aa15.35■□□□□ 0.05
DDX39A-218ENST00000592632 FAM83BQ5T0W9 1011 aa15.35■□□□□ 0.05
DDX39A-218ENST00000592632 GMCL1P1Q8NEA9 526 aa15.35■□□□□ 0.05
DDX39A-218ENST00000592632 PAGR1Q9BTK6 254 aa15.35■□□□□ 0.05
DDX39A-218ENST00000592632 SRRDQ9UH36 339 aa15.35■□□□□ 0.05
DDX39A-218ENST00000592632 ADAMTS5Q9UNA0 930 aa15.35■□□□□ 0.05
DDX39A-218ENST00000592632 STX8Q9UNK0 236 aa15.35■□□□□ 0.05
DDX39A-218ENST00000592632 TAF6LQ9Y6J9 622 aa15.35■□□□□ 0.05
DDX39A-218ENST00000592632 CENPFP49454 3210 aa15.34■□□□□ 0.05
DDX39A-218ENST00000592632 B4E1Z4 1266 aa15.34■□□□□ 0.05
DDX39A-218ENST00000592632 KDM4AO75164 1064 aa15.34■□□□□ 0.05
DDX39A-218ENST00000592632 CDC45O75419 566 aa15.34■□□□□ 0.05
DDX39A-218ENST00000592632 FLOT1O75955 427 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms