RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 PDE4CQ08493 712 aa20.31■□□□□ 0.84
SPC24-206ENST00000592540 CCDC148Q8NFR7 591 aa20.31■□□□□ 0.84
SPC24-206ENST00000592540 VPS16Q9H269 839 aa20.31■□□□□ 0.84
SPC24-206ENST00000592540 ARMT1Q9H993 441 aa20.31■□□□□ 0.84
SPC24-206ENST00000592540 ERICH2A1L162 156 aa20.31■□□□□ 0.84
SPC24-206ENST00000592540 GSG1L2A8MUP6 293 aa20.31■□□□□ 0.84
SPC24-206ENST00000592540 UQCRFS1P1P0C7P4 283 aa20.31■□□□□ 0.84
SPC24-206ENST00000592540 NUP133Q8WUM0 1156 aa20.31■□□□□ 0.84
SPC24-206ENST00000592540 SHISA4Q96DD7 197 aa20.31■□□□□ 0.84
SPC24-206ENST00000592540 DOCK2Q92608 1830 aa20.31■□□□□ 0.84
SPC24-206ENST00000592540 EIF3CLB5ME19 914 aaKnown RBP20.3■□□□□ 0.84
SPC24-206ENST00000592540 RNF40O75150 1001 aa20.3■□□□□ 0.84
SPC24-206ENST00000592540 PDE8BO95263 885 aa20.3■□□□□ 0.84
SPC24-206ENST00000592540 KRT9P35527 623 aa20.3■□□□□ 0.84
SPC24-206ENST00000592540 AARSP49588 968 aaKnown RBP eCLIP20.3■□□□□ 0.84
SPC24-206ENST00000592540 COPB1P53618 953 aaKnown RBP20.3■□□□□ 0.84
SPC24-206ENST00000592540 TRIM14Q14142 442 aa20.3■□□□□ 0.84
SPC24-206ENST00000592540 EARS2Q5JPH6 523 aaKnown RBP20.3■□□□□ 0.84
SPC24-206ENST00000592540 TRAPPC11Q7Z392 1133 aa20.3■□□□□ 0.84
SPC24-206ENST00000592540 ZNF654Q8IZM8 581 aa20.3■□□□□ 0.84
SPC24-206ENST00000592540 MAGEB6Q8N7X4 407 aa20.3■□□□□ 0.84
SPC24-206ENST00000592540 STAG1Q8WVM7 1258 aa20.3■□□□□ 0.84
SPC24-206ENST00000592540 FERMT2Q96AC1 680 aa20.3■□□□□ 0.84
SPC24-206ENST00000592540 EIF3CQ99613 913 aaKnown RBP20.3■□□□□ 0.84
SPC24-206ENST00000592540 SYF2O95926 243 aaKnown RBP20.3■□□□□ 0.84
SPC24-206ENST00000592540 USP14P54578 494 aa20.3■□□□□ 0.84
SPC24-206ENST00000592540 CTR9Q6PD62 1173 aa20.3■□□□□ 0.84
SPC24-206ENST00000592540 TMTC2Q8N394 836 aa20.3■□□□□ 0.84
SPC24-206ENST00000592540 PCDH11XQ9BZA7 1347 aa20.3■□□□□ 0.84
SPC24-206ENST00000592540 PCDH11YQ9BZA8 1340 aa20.3■□□□□ 0.84
SPC24-206ENST00000592540 ANKRD18BA2A2Z9 1011 aa20.29■□□□□ 0.84
SPC24-206ENST00000592540 RCAN1P53805 252 aa20.29■□□□□ 0.84
SPC24-206ENST00000592540 AKAP17AQ02040 695 aaKnown RBP20.29■□□□□ 0.84
SPC24-206ENST00000592540 CTCFLQ8NI51 663 aaPredicted RBP20.29■□□□□ 0.84
SPC24-206ENST00000592540 STAMQ92783 540 aa20.29■□□□□ 0.84
SPC24-206ENST00000592540 TAB2Q9NYJ8 693 aa20.29■□□□□ 0.84
SPC24-206ENST00000592540 GUCA1BQ9UMX6 200 aa20.29■□□□□ 0.84
SPC24-206ENST00000592540 REXO2Q9Y3B8 237 aaKnown RBP20.29■□□□□ 0.84
SPC24-206ENST00000592540 EPN1Q9Y6I3 576 aaPredicted RBP20.29■□□□□ 0.84
SPC24-206ENST00000592540 SPAG1Q07617 926 aa20.28■□□□□ 0.84
SPC24-206ENST00000592540 RRAGBQ5VZM2 374 aa20.28■□□□□ 0.84
SPC24-206ENST00000592540 CHP1Q99653 195 aa20.28■□□□□ 0.84
SPC24-206ENST00000592540 RNF26Q9BY78 433 aaPredicted RBP20.28■□□□□ 0.84
SPC24-206ENST00000592540 TRIM10Q9UDY6 481 aa20.28■□□□□ 0.84
SPC24-206ENST00000592540 RWDD2AQ9UIY3 292 aa20.28■□□□□ 0.84
SPC24-206ENST00000592540 PRKAB2O43741 272 aa20.28■□□□□ 0.84
SPC24-206ENST00000592540 PRPF6O94906 941 aaKnown RBP20.28■□□□□ 0.84
SPC24-206ENST00000592540 NDUFA10O95299 355 aa20.28■□□□□ 0.84
SPC24-206ENST00000592540 KIF6Q6ZMV9 814 aa20.28■□□□□ 0.84
SPC24-206ENST00000592540 ZCRB1Q8TBF4 217 aaKnown RBP20.28■□□□□ 0.84
SPC24-206ENST00000592540 DDX17Q92841 729 aaKnown RBP20.28■□□□□ 0.84
SPC24-206ENST00000592540 VPS54Q9P1Q0 977 aa20.28■□□□□ 0.84
SPC24-206ENST00000592540 CDHR2Q9BYE9 1310 aa20.28■□□□□ 0.84
SPC24-206ENST00000592540 TNS3Q68CZ2 1445 aa20.28■□□□□ 0.84
SPC24-206ENST00000592540 ZNF142P52746 1687 aaPredicted RBP20.27■□□□□ 0.84
SPC24-206ENST00000592540 XDHP47989 1333 aa20.27■□□□□ 0.84
SPC24-206ENST00000592540 PSMD14O00487 310 aa20.27■□□□□ 0.84
SPC24-206ENST00000592540 WNT7AO00755 349 aa20.27■□□□□ 0.84
SPC24-206ENST00000592540 KRT2P35908 639 aa20.27■□□□□ 0.84
SPC24-206ENST00000592540 CORO7P57737 925 aa20.27■□□□□ 0.84
SPC24-206ENST00000592540 TCP11X2Q5H9J9 407 aa20.27■□□□□ 0.84
SPC24-206ENST00000592540 AFAP1L1Q8TED9 768 aa20.27■□□□□ 0.84
SPC24-206ENST00000592540 MTA3Q9BTC8 594 aa20.27■□□□□ 0.84
SPC24-206ENST00000592540 BMP15O95972 392 aa20.27■□□□□ 0.84
SPC24-206ENST00000592540 XBP1P17861 261 aa20.27■□□□□ 0.84
SPC24-206ENST00000592540 MCM3P25205 808 aa20.27■□□□□ 0.84
SPC24-206ENST00000592540 TDO2P48775 406 aa20.27■□□□□ 0.84
SPC24-206ENST00000592540 MAP3K12Q12852 859 aa20.27■□□□□ 0.84
SPC24-206ENST00000592540 ANKRD20A12PQ8NF67 263 aa20.27■□□□□ 0.84
SPC24-206ENST00000592540 PHF20Q9BVI0 1012 aa20.27■□□□□ 0.84
SPC24-206ENST00000592540 BLZF1Q9H2G9 400 aa20.27■□□□□ 0.84
SPC24-206ENST00000592540 RNF216Q9NWF9 866 aaPredicted RBP20.27■□□□□ 0.84
SPC24-206ENST00000592540 HDAC6Q9UBN7 1215 aa20.27■□□□□ 0.84
SPC24-206ENST00000592540 HPCAL4Q9UM19 191 aa20.27■□□□□ 0.84
SPC24-206ENST00000592540 BCORQ6W2J9 1755 aa20.27■□□□□ 0.83
SPC24-206ENST00000592540 TNS2Q63HR2 1409 aa20.26■□□□□ 0.83
SPC24-206ENST00000592540 KCNJ18B7U540 433 aa20.26■□□□□ 0.83
SPC24-206ENST00000592540 ENC1O14682 589 aa20.26■□□□□ 0.83
SPC24-206ENST00000592540 PPFIA4O75335 1185 aa20.26■□□□□ 0.83
SPC24-206ENST00000592540 CTSWP56202 376 aa20.26■□□□□ 0.83
SPC24-206ENST00000592540 PAK1Q13153 545 aa20.26■□□□□ 0.83
SPC24-206ENST00000592540 KCNJ12Q14500 433 aa20.26■□□□□ 0.83
SPC24-206ENST00000592540 MAP9Q49MG5 647 aa20.26■□□□□ 0.83
SPC24-206ENST00000592540 SPATA5Q8NB90 893 aa20.26■□□□□ 0.83
SPC24-206ENST00000592540 PKN1Q16512 942 aa20.26■□□□□ 0.83
SPC24-206ENST00000592540 TTC31Q49AM3 519 aaPredicted RBP20.26■□□□□ 0.83
SPC24-206ENST00000592540 PACS2Q86VP3 889 aa20.26■□□□□ 0.83
SPC24-206ENST00000592540 MMS19Q96T76 1030 aa20.26■□□□□ 0.83
SPC24-206ENST00000592540 NACAP1Q9BZK3 213 aa20.26■□□□□ 0.83
SPC24-206ENST00000592540 HAUS4Q9H6D7 363 aa20.26■□□□□ 0.83
SPC24-206ENST00000592540 ARAP2Q8WZ64 1704 aa20.25■□□□□ 0.83
SPC24-206ENST00000592540 ZC3H4Q9UPT8 1303 aaKnown RBP20.25■□□□□ 0.83
SPC24-206ENST00000592540 ZNF174Q15697 407 aa20.25■□□□□ 0.83
SPC24-206ENST00000592540 E2F4Q16254 413 aa20.25■□□□□ 0.83
SPC24-206ENST00000592540 ATP1A1P05023 1023 aaKnown RBP20.25■□□□□ 0.83
SPC24-206ENST00000592540 UBXN1Q04323 297 aa20.25■□□□□ 0.83
SPC24-206ENST00000592540 PROSER2Q86WR7 435 aaPredicted RBP20.25■□□□□ 0.83
SPC24-206ENST00000592540 LCORLQ8N3X6 602 aa20.25■□□□□ 0.83
SPC24-206ENST00000592540 NELFBQ8WX92 580 aa20.25■□□□□ 0.83
SPC24-206ENST00000592540 PLEKHA4Q9H4M7 779 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms