RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 TRIM60Q495X7 471 aa23.88■■□□□ 1.41
PRKCSH-216ENST00000592445 SLC5A4Q9NY91 659 aa23.88■■□□□ 1.41
PRKCSH-216ENST00000592445 LTBP2Q14767 1821 aa23.87■■□□□ 1.41
PRKCSH-216ENST00000592445 MPHOSPH10O00566 681 aaKnown RBP23.87■■□□□ 1.41
PRKCSH-216ENST00000592445 SEPT4O43236 478 aa23.87■■□□□ 1.41
PRKCSH-216ENST00000592445 IGHA2P01877 340 aa23.87■■□□□ 1.41
PRKCSH-216ENST00000592445 GUCY1A2P33402 732 aa23.87■■□□□ 1.41
PRKCSH-216ENST00000592445 SEPT2Q15019 361 aa23.87■■□□□ 1.41
PRKCSH-216ENST00000592445 TMEM57Q8N5G2 664 aa23.87■■□□□ 1.41
PRKCSH-216ENST00000592445 SPATC1LQ9H0A9 340 aa23.87■■□□□ 1.41
PRKCSH-216ENST00000592445 ERCC3P19447 782 aa23.86■■□□□ 1.41
PRKCSH-216ENST00000592445 ADCYAP1R1P41586 468 aa23.86■■□□□ 1.41
PRKCSH-216ENST00000592445 FERMT2Q96AC1 680 aa23.86■■□□□ 1.41
PRKCSH-216ENST00000592445 PRUNE2Q8WUY3 3088 aa23.86■■□□□ 1.41
PRKCSH-216ENST00000592445 COBLO75128 1261 aa23.85■■□□□ 1.41
PRKCSH-216ENST00000592445 SMAD3P84022 425 aaKnown RBP23.85■■□□□ 1.41
PRKCSH-216ENST00000592445 PLS1Q14651 629 aa23.85■■□□□ 1.41
PRKCSH-216ENST00000592445 SHCBP1Q8NEM2 672 aa23.85■■□□□ 1.41
PRKCSH-216ENST00000592445 MYLIPQ8WY64 445 aa23.85■■□□□ 1.41
PRKCSH-216ENST00000592445 EAF2Q96CJ1 260 aaPredicted RBP23.85■■□□□ 1.41
PRKCSH-216ENST00000592445 ANTXR1Q9H6X2 564 aa23.85■■□□□ 1.41
PRKCSH-216ENST00000592445 C1orf115Q9H7X2 142 aa23.85■■□□□ 1.41
PRKCSH-216ENST00000592445 PDLIM7Q9NR12 457 aa23.85■■□□□ 1.41
PRKCSH-216ENST00000592445 RLFQ13129 1914 aa23.84■■□□□ 1.41
PRKCSH-216ENST00000592445 SNX17Q15036 470 aa23.84■■□□□ 1.41
PRKCSH-216ENST00000592445 PRAMEF19Q5SWL8 479 aa23.84■■□□□ 1.41
PRKCSH-216ENST00000592445 TMED8Q6PL24 325 aaPredicted RBP23.84■■□□□ 1.41
PRKCSH-216ENST00000592445 NCAPG2Q86XI2 1143 aa23.84■■□□□ 1.41
PRKCSH-216ENST00000592445 A0A1W2PRG0 241 aa23.83■■□□□ 1.41
PRKCSH-216ENST00000592445 LRRC41Q15345 812 aa23.83■■□□□ 1.41
PRKCSH-216ENST00000592445 SH3RF1Q7Z6J0 888 aa23.83■■□□□ 1.41
PRKCSH-216ENST00000592445 MB21D1Q8N884 522 aa23.83■■□□□ 1.41
PRKCSH-216ENST00000592445 TTYH1Q9H313 450 aaPredicted RBP23.83■■□□□ 1.41
PRKCSH-216ENST00000592445 MROH8Q9H579 483 aa23.83■■□□□ 1.41
PRKCSH-216ENST00000592445 NOP58Q9Y2X3 529 aaKnown RBP23.83■■□□□ 1.41
PRKCSH-216ENST00000592445 SPTBN5Q9NRC6 3674 aaKnown RBP23.82■■□□□ 1.4
PRKCSH-216ENST00000592445 ZNF236Q9UL36 1845 aa23.82■■□□□ 1.4
PRKCSH-216ENST00000592445 MAGEB6P1A0A0J9YX57 407 aa23.82■■□□□ 1.4
PRKCSH-216ENST00000592445 TRIM43BA6NCK2 446 aa23.82■■□□□ 1.4
PRKCSH-216ENST00000592445 FOSL2P15408 326 aa23.82■■□□□ 1.4
PRKCSH-216ENST00000592445 ZKSCAN2Q63HK3 967 aa23.82■■□□□ 1.4
PRKCSH-216ENST00000592445 TRIM43Q96BQ3 446 aaPredicted RBP23.82■■□□□ 1.4
PRKCSH-216ENST00000592445 MCM9Q9NXL9 1143 aa23.82■■□□□ 1.4
PRKCSH-216ENST00000592445 TLE2Q04725 743 aa23.81■■□□□ 1.4
PRKCSH-216ENST00000592445 GABPAQ06546 454 aa23.81■■□□□ 1.4
PRKCSH-216ENST00000592445 FAM47AQ5JRC9 791 aa23.81■■□□□ 1.4
PRKCSH-216ENST00000592445 C1orf53Q5VUE5 145 aa23.81■■□□□ 1.4
PRKCSH-216ENST00000592445 ABRAQ8N0Z2 381 aa23.81■■□□□ 1.4
PRKCSH-216ENST00000592445 RIOK1Q9BRS2 568 aaKnown RBP23.81■■□□□ 1.4
PRKCSH-216ENST00000592445 CDH23Q9H251 3354 aa23.8■■□□□ 1.4
PRKCSH-216ENST00000592445 FLOT1O75955 427 aa23.8■■□□□ 1.4
PRKCSH-216ENST00000592445 SAMD1Q6SPF0 538 aaPredicted RBP23.8■■□□□ 1.4
PRKCSH-216ENST00000592445 MAML3Q96JK9 1138 aa23.8■■□□□ 1.4
PRKCSH-216ENST00000592445 RNPC3Q96LT9 517 aaKnown RBP23.8■■□□□ 1.4
PRKCSH-216ENST00000592445 CRNKL1Q9BZJ0 848 aaKnown RBP23.8■■□□□ 1.4
PRKCSH-216ENST00000592445 TACC3Q9Y6A5 838 aa23.8■■□□□ 1.4
PRKCSH-216ENST00000592445 FCER1AP12319 257 aa23.79■■□□□ 1.4
PRKCSH-216ENST00000592445 DSG3P32926 999 aa23.79■■□□□ 1.4
PRKCSH-216ENST00000592445 TMEM179Q6ZVK1 233 aa23.79■■□□□ 1.4
PRKCSH-216ENST00000592445 RARBP10826 455 aa23.78■■□□□ 1.4
PRKCSH-216ENST00000592445 EVX2Q03828 476 aa23.78■■□□□ 1.4
PRKCSH-216ENST00000592445 KIAA1755Q5JYT7 1200 aa23.78■■□□□ 1.4
PRKCSH-216ENST00000592445 AACSQ86V21 672 aa23.78■■□□□ 1.4
PRKCSH-216ENST00000592445 SPICE1Q8N0Z3 855 aa23.78■■□□□ 1.4
PRKCSH-216ENST00000592445 ATG4CQ96DT6 458 aa23.78■■□□□ 1.4
PRKCSH-216ENST00000592445 XPNPEP3Q9NQH7 507 aa23.78■■□□□ 1.4
PRKCSH-216ENST00000592445 CLTBP09497 229 aa23.77■■□□□ 1.4
PRKCSH-216ENST00000592445 TTF1Q15361 905 aaPredicted RBP23.77■■□□□ 1.4
PRKCSH-216ENST00000592445 SLC9C2Q5TAH2 1124 aa23.77■■□□□ 1.4
PRKCSH-216ENST00000592445 RNF180Q86T96 592 aa23.77■■□□□ 1.4
PRKCSH-216ENST00000592445 SYMPKQ92797 1274 aaKnown RBP23.77■■□□□ 1.4
PRKCSH-216ENST00000592445 ARHGEF10LQ9HCE6 1279 aa23.77■■□□□ 1.4
PRKCSH-216ENST00000592445 PRDM6Q9NQX0 595 aa23.77■■□□□ 1.4
PRKCSH-216ENST00000592445 PHF24Q9UPV7 400 aa23.77■■□□□ 1.4
PRKCSH-216ENST00000592445 RAG1P15918 1043 aa23.76■■□□□ 1.39
PRKCSH-216ENST00000592445 FTSJ3Q8IY81 847 aaKnown RBP23.76■■□□□ 1.39
PRKCSH-216ENST00000592445 SH2D4AQ9H788 454 aa23.76■■□□□ 1.39
PRKCSH-216ENST00000592445 NRBP1Q9UHY1 535 aa23.76■■□□□ 1.39
PRKCSH-216ENST00000592445 NAV1Q8NEY1 1877 aa23.76■■□□□ 1.39
PRKCSH-216ENST00000592445 TMEM265A0A087WTH1 108 aa23.75■■□□□ 1.39
PRKCSH-216ENST00000592445 PQBP1O60828 265 aaKnown RBP23.75■■□□□ 1.39
PRKCSH-216ENST00000592445 SLC25A27O95847 323 aa23.75■■□□□ 1.39
PRKCSH-216ENST00000592445 PDE6AP16499 860 aa23.75■■□□□ 1.39
PRKCSH-216ENST00000592445 ITGB8P26012 769 aa23.75■■□□□ 1.39
PRKCSH-216ENST00000592445 ITPRIPQ8IWB1 547 aa23.75■■□□□ 1.39
PRKCSH-216ENST00000592445 SLC44A5Q8NCS7 719 aa23.75■■□□□ 1.39
PRKCSH-216ENST00000592445 SDR42E1Q8WUS8 393 aa23.75■■□□□ 1.39
PRKCSH-216ENST00000592445 MMP19Q99542 508 aa23.75■■□□□ 1.39
PRKCSH-216ENST00000592445 SWAP70Q9UH65 585 aa23.75■■□□□ 1.39
PRKCSH-216ENST00000592445 A0A0G2JMZ2 1700 aa23.75■■□□□ 1.39
PRKCSH-216ENST00000592445 PGK1P00558 417 aa23.74■■□□□ 1.39
PRKCSH-216ENST00000592445 CYP2D6P10635 497 aa23.74■■□□□ 1.39
PRKCSH-216ENST00000592445 EPHB4P54760 987 aa23.74■■□□□ 1.39
PRKCSH-216ENST00000592445 ICA1Q05084 483 aa23.74■■□□□ 1.39
PRKCSH-216ENST00000592445 TMEM132BQ14DG7 1078 aa23.74■■□□□ 1.39
PRKCSH-216ENST00000592445 ERC1Q8IUD2 1116 aa23.74■■□□□ 1.39
PRKCSH-216ENST00000592445 CLEC10AQ8IUN9 316 aa23.74■■□□□ 1.39
PRKCSH-216ENST00000592445 DCP1AQ9NPI6 582 aaPredicted RBP23.74■■□□□ 1.39
PRKCSH-216ENST00000592445 A0A1W2PQ45 241 aaPredicted RBP23.73■■□□□ 1.39
PRKCSH-216ENST00000592445 A0A1W2PQY0 241 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms