RNA–Protein interactions for RNA: ENST00000592138.5

TPM4-215, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-215ENST00000592138 VCPKMTQ9H867 229 aa11.49□□□□□ -0.57
TPM4-215ENST00000592138 EMILIN3Q9NT22 766 aa11.49□□□□□ -0.57
TPM4-215ENST00000592138 PNMA3Q9UL41 463 aa11.49□□□□□ -0.57
TPM4-215ENST00000592138 NEDD4P46934 1319 aa11.49□□□□□ -0.57
TPM4-215ENST00000592138 MKI67P46013 3256 aaKnown RBP11.48□□□□□ -0.57
TPM4-215ENST00000592138 TRPA1O75762 1119 aa11.48□□□□□ -0.57
TPM4-215ENST00000592138 TRDNQ13061 729 aa11.48□□□□□ -0.57
TPM4-215ENST00000592138 TSGA10IPQ3SY00 556 aa11.48□□□□□ -0.57
TPM4-215ENST00000592138 FAM47AQ5JRC9 791 aa11.48□□□□□ -0.57
TPM4-215ENST00000592138 GADL1Q6ZQY3 521 aa11.48□□□□□ -0.57
TPM4-215ENST00000592138 IQCA1Q86XH1 822 aa11.48□□□□□ -0.57
TPM4-215ENST00000592138 GMCL1P1Q8NEA9 526 aa11.48□□□□□ -0.57
TPM4-215ENST00000592138 TTC14Q96N46 770 aa11.48□□□□□ -0.57
TPM4-215ENST00000592138 ZFYVE28Q9HCC9 887 aa11.48□□□□□ -0.57
TPM4-215ENST00000592138 GOPCQ9HD26 462 aa11.48□□□□□ -0.57
TPM4-215ENST00000592138 INCENPQ9NQS7 918 aa11.48□□□□□ -0.57
TPM4-215ENST00000592138 IL17RBQ9NRM6 502 aa11.48□□□□□ -0.57
TPM4-215ENST00000592138 TOMM22Q9NS69 142 aa11.48□□□□□ -0.57
TPM4-215ENST00000592138 MYH8P13535 1937 aa11.47□□□□□ -0.57
TPM4-215ENST00000592138 ADGRA2Q96PE1 1338 aa11.47□□□□□ -0.57
TPM4-215ENST00000592138 E7EWF7 191 aa11.47□□□□□ -0.57
TPM4-215ENST00000592138 SLC27A2O14975 620 aa11.47□□□□□ -0.57
TPM4-215ENST00000592138 WDR46O15213 610 aaKnown RBP11.47□□□□□ -0.57
TPM4-215ENST00000592138 TLR2O60603 784 aa11.47□□□□□ -0.57
TPM4-215ENST00000592138 VCAM1P19320 739 aa11.47□□□□□ -0.57
TPM4-215ENST00000592138 CRHR2Q13324 411 aa11.47□□□□□ -0.57
TPM4-215ENST00000592138 TAF1CQ15572 869 aaPredicted RBP11.47□□□□□ -0.57
TPM4-215ENST00000592138 RRP12Q5JTH9 1297 aaKnown RBP11.47□□□□□ -0.57
TPM4-215ENST00000592138 TREML2Q5T2D2 321 aa11.47□□□□□ -0.57
TPM4-215ENST00000592138 CREB3L3Q68CJ9 461 aa11.47□□□□□ -0.57
TPM4-215ENST00000592138 DGKHQ86XP1 1220 aa11.47□□□□□ -0.57
TPM4-215ENST00000592138 CLEC10AQ8IUN9 316 aa11.47□□□□□ -0.57
TPM4-215ENST00000592138 NCOA7Q8NI08 942 aa11.47□□□□□ -0.57
TPM4-215ENST00000592138 GTF3C2Q8WUA4 911 aaPredicted RBP11.47□□□□□ -0.57
TPM4-215ENST00000592138 KCNB2Q92953 911 aa11.47□□□□□ -0.57
TPM4-215ENST00000592138 MTA3Q9BTC8 594 aa11.47□□□□□ -0.57
TPM4-215ENST00000592138 PTPRFP10586 1907 aa11.47□□□□□ -0.57
TPM4-215ENST00000592138 MYPNQ86TC9 1320 aa11.46□□□□□ -0.57
TPM4-215ENST00000592138 B4E1Z4 1266 aa11.46□□□□□ -0.57
TPM4-215ENST00000592138 USP17L15C9J2P7 530 aa11.46□□□□□ -0.57
TPM4-215ENST00000592138 USP17L13C9JLJ4 530 aa11.46□□□□□ -0.57
TPM4-215ENST00000592138 USP17L11C9JVI0 530 aa11.46□□□□□ -0.57
TPM4-215ENST00000592138 USP17L18D6R9N7 530 aa11.46□□□□□ -0.57
TPM4-215ENST00000592138 USP17L22D6RA61 530 aa11.46□□□□□ -0.57
TPM4-215ENST00000592138 USP17L17D6RBQ6 530 aa11.46□□□□□ -0.57
TPM4-215ENST00000592138 USP17L19D6RCP7 530 aa11.46□□□□□ -0.57
TPM4-215ENST00000592138 USP17L20D6RJB6 530 aa11.46□□□□□ -0.57
TPM4-215ENST00000592138 KDM4AO75164 1064 aa11.46□□□□□ -0.57
TPM4-215ENST00000592138 ZKSCAN1P17029 563 aaPredicted RBP11.46□□□□□ -0.57
TPM4-215ENST00000592138 OSBPP22059 807 aa11.46□□□□□ -0.57
TPM4-215ENST00000592138 HSPA4P34932 840 aa11.46□□□□□ -0.57
TPM4-215ENST00000592138 USP17L24Q0WX57 530 aa11.46□□□□□ -0.57
TPM4-215ENST00000592138 KRT32Q14532 448 aa11.46□□□□□ -0.57
TPM4-215ENST00000592138 LBX2Q6XYB7 198 aa11.46□□□□□ -0.57
TPM4-215ENST00000592138 RALYLQ86SE5 291 aaKnown RBP11.46□□□□□ -0.57
TPM4-215ENST00000592138 ANKS1AQ92625 1134 aa11.46□□□□□ -0.57
TPM4-215ENST00000592138 ZSWIM5Q9P217 1185 aa11.46□□□□□ -0.57
TPM4-215ENST00000592138 CLIP2Q9UDT6 1046 aa11.46□□□□□ -0.57
TPM4-215ENST00000592138 STX8Q9UNK0 236 aa11.46□□□□□ -0.57
TPM4-215ENST00000592138 TOP1P11387 765 aaKnown RBP11.45□□□□□ -0.58
TPM4-215ENST00000592138 GCLCP48506 637 aaPredicted RBP11.45□□□□□ -0.58
TPM4-215ENST00000592138 ATP2B2Q01814 1243 aa11.45□□□□□ -0.58
TPM4-215ENST00000592138 DGKZQ13574 1117 aa11.45□□□□□ -0.58
TPM4-215ENST00000592138 ZYXQ15942 572 aaKnown RBP11.45□□□□□ -0.58
TPM4-215ENST00000592138 C17orf99Q6UX52 265 aa11.45□□□□□ -0.58
TPM4-215ENST00000592138 CATSPERGQ6ZRH7 1159 aa11.45□□□□□ -0.58
TPM4-215ENST00000592138 STOX1Q6ZVD7 989 aa11.45□□□□□ -0.58
TPM4-215ENST00000592138 GMCL1Q96IK5 515 aa11.45□□□□□ -0.58
TPM4-215ENST00000592138 ZSCAN10Q96SZ4 725 aaPredicted RBP11.45□□□□□ -0.58
TPM4-215ENST00000592138 ASCC2Q9H1I8 757 aaPredicted RBP11.45□□□□□ -0.58
TPM4-215ENST00000592138 RPAP3Q9H6T3 665 aaPredicted RBP11.45□□□□□ -0.58
TPM4-215ENST00000592138 F5H6K3 240 aa11.44□□□□□ -0.58
TPM4-215ENST00000592138 GPR25O00155 361 aa11.44□□□□□ -0.58
TPM4-215ENST00000592138 NMT2O60551 498 aa11.44□□□□□ -0.58
TPM4-215ENST00000592138 TBC1D8O95759 1140 aa11.44□□□□□ -0.58
TPM4-215ENST00000592138 NDUFB10O96000 172 aa11.44□□□□□ -0.58
TPM4-215ENST00000592138 CYP2C8P10632 490 aa11.44□□□□□ -0.58
TPM4-215ENST00000592138 IRX3P78415 501 aaPredicted RBP11.44□□□□□ -0.58
TPM4-215ENST00000592138 KLRC3Q07444 240 aa11.44□□□□□ -0.58
TPM4-215ENST00000592138 SART3Q15020 963 aaKnown RBP11.44□□□□□ -0.58
TPM4-215ENST00000592138 KIAA1755Q5JYT7 1200 aa11.44□□□□□ -0.58
TPM4-215ENST00000592138 RCSD1Q6JBY9 416 aa11.44□□□□□ -0.58
TPM4-215ENST00000592138 MB21D2Q8IYB1 491 aaPredicted RBP11.44□□□□□ -0.58
TPM4-215ENST00000592138 NKX2-3Q8TAU0 364 aa11.44□□□□□ -0.58
TPM4-215ENST00000592138 SMCR8Q8TEV9 937 aaPredicted RBP11.44□□□□□ -0.58
TPM4-215ENST00000592138 UBAC1Q9BSL1 405 aa11.44□□□□□ -0.58
TPM4-215ENST00000592138 USP26Q9BXU7 913 aa11.44□□□□□ -0.58
TPM4-215ENST00000592138 TAF6LQ9Y6J9 622 aa11.44□□□□□ -0.58
TPM4-215ENST00000592138 BRCA2P51587 3418 aa11.44□□□□□ -0.58
TPM4-215ENST00000592138 TNKSO95271 1327 aa11.43□□□□□ -0.58
TPM4-215ENST00000592138 WDR19Q8NEZ3 1342 aa11.43□□□□□ -0.58
TPM4-215ENST00000592138 PLA2G6O60733 806 aa11.43□□□□□ -0.58
TPM4-215ENST00000592138 HMGB1P09429 215 aaKnown RBP11.43□□□□□ -0.58
TPM4-215ENST00000592138 BCRP11274 1271 aa11.43□□□□□ -0.58
TPM4-215ENST00000592138 MCM5P33992 734 aa11.43□□□□□ -0.58
TPM4-215ENST00000592138 HERVK_113P62684 666 aa11.43□□□□□ -0.58
TPM4-215ENST00000592138 SEC23AQ15436 765 aa11.43□□□□□ -0.58
TPM4-215ENST00000592138 FAM110CQ1W6H9 321 aa11.43□□□□□ -0.58
TPM4-215ENST00000592138 LRRC47Q8N1G4 583 aaKnown RBP11.43□□□□□ -0.58
TPM4-215ENST00000592138 ENAHQ8N8S7 591 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms