RNA–Protein interactions for RNA: ENST00000591955.1

NPC1-213, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-213ENST00000591955 KRBA2Q6ZNG9 492 aa6.85□□□□□ -1.31
NPC1-213ENST00000591955 CCDC186Q7Z3E2 898 aa6.85□□□□□ -1.31
NPC1-213ENST00000591955 SPATS2Q86XZ4 545 aaKnown RBP6.85□□□□□ -1.31
NPC1-213ENST00000591955 ZGPATQ8N5A5 531 aaKnown RBP6.85□□□□□ -1.31
NPC1-213ENST00000591955 NFATC2IPQ8NCF5 419 aa6.85□□□□□ -1.31
NPC1-213ENST00000591955 ANKRD20A12PQ8NF67 263 aa6.85□□□□□ -1.31
NPC1-213ENST00000591955 LPIN3Q9BQK8 851 aa6.85□□□□□ -1.31
NPC1-213ENST00000591955 ARFGAP3Q9NP61 516 aa6.85□□□□□ -1.31
NPC1-213ENST00000591955 ZNF215Q9UL58 517 aaPredicted RBP6.85□□□□□ -1.31
NPC1-213ENST00000591955 CHMP3Q9Y3E7 222 aa6.85□□□□□ -1.31
NPC1-213ENST00000591955 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.85□□□□□ -1.31
NPC1-213ENST00000591955 FHOD1Q9Y613 1164 aa6.85□□□□□ -1.31
NPC1-213ENST00000591955 DCCP43146 1447 aa6.84□□□□□ -1.31
NPC1-213ENST00000591955 CAMTA1Q9Y6Y1 1673 aa6.84□□□□□ -1.31
NPC1-213ENST00000591955 ATXN2Q99700 1313 aaKnown RBP6.84□□□□□ -1.31
NPC1-213ENST00000591955 CCDC151A5D8V7 595 aa6.84□□□□□ -1.31
NPC1-213ENST00000591955 STX6O43752 255 aa6.84□□□□□ -1.31
NPC1-213ENST00000591955 DEAF1O75398 565 aaPredicted RBP6.84□□□□□ -1.31
NPC1-213ENST00000591955 GSPT1P15170 499 aaKnown RBP6.84□□□□□ -1.31
NPC1-213ENST00000591955 PTGS1P23219 599 aa6.84□□□□□ -1.31
NPC1-213ENST00000591955 MCM3P25205 808 aa6.84□□□□□ -1.31
NPC1-213ENST00000591955 TMPOP42166 694 aaKnown RBP6.84□□□□□ -1.31
NPC1-213ENST00000591955 SNW1Q13573 536 aaKnown RBP6.84□□□□□ -1.31
NPC1-213ENST00000591955 LRRFIP1Q32MZ4 808 aaKnown RBP6.84□□□□□ -1.31
NPC1-213ENST00000591955 ATL3Q6DD88 541 aa6.84□□□□□ -1.31
NPC1-213ENST00000591955 TTLL5Q6EMB2 1281 aa6.84□□□□□ -1.31
NPC1-213ENST00000591955 SYT10Q6XYQ8 523 aa6.84□□□□□ -1.31
NPC1-213ENST00000591955 FAM35AQ86V20 835 aa6.84□□□□□ -1.31
NPC1-213ENST00000591955 LRRC8AQ8IWT6 810 aa6.84□□□□□ -1.31
NPC1-213ENST00000591955 ANKRD44Q8N8A2 993 aa6.84□□□□□ -1.31
NPC1-213ENST00000591955 HNRNPLLQ8WVV9 542 aaKnown RBP6.84□□□□□ -1.31
NPC1-213ENST00000591955 DNAAF4Q8WXU2 420 aa6.84□□□□□ -1.31
NPC1-213ENST00000591955 MPHOSPH8Q99549 860 aa6.84□□□□□ -1.31
NPC1-213ENST00000591955 BCL2L13Q9BXK5 485 aa6.84□□□□□ -1.31
NPC1-213ENST00000591955 OSBPL5Q9H0X9 879 aaPredicted RBP6.84□□□□□ -1.31
NPC1-213ENST00000591955 TNMDQ9H2S6 317 aa6.84□□□□□ -1.31
NPC1-213ENST00000591955 C19orf44Q9H6X5 657 aa6.84□□□□□ -1.31
NPC1-213ENST00000591955 POLKQ9UBT6 870 aa6.84□□□□□ -1.31
NPC1-213ENST00000591955 SMC3Q9UQE7 1217 aa6.84□□□□□ -1.31
NPC1-213ENST00000591955 OAS3Q9Y6K5 1087 aaKnown RBP6.84□□□□□ -1.31
NPC1-213ENST00000591955 NRXN1Q9ULB1 1477 aa6.84□□□□□ -1.31
NPC1-213ENST00000591955 CPSF1Q10570 1443 aaKnown RBP6.84□□□□□ -1.32
NPC1-213ENST00000591955 AATKQ6ZMQ8 1374 aa6.83□□□□□ -1.32
NPC1-213ENST00000591955 TTC21BQ7Z4L5 1316 aa6.83□□□□□ -1.32
NPC1-213ENST00000591955 A0A087WUV0 522 aaPredicted RBP6.83□□□□□ -1.32
NPC1-213ENST00000591955 KIAA1324LA8MWY0 1029 aaPredicted RBP6.83□□□□□ -1.32
NPC1-213ENST00000591955 DLL1O00548 723 aa6.83□□□□□ -1.32
NPC1-213ENST00000591955 ZSCAN12O43309 604 aa6.83□□□□□ -1.32
NPC1-213ENST00000591955 MED26O95402 600 aa6.83□□□□□ -1.32
NPC1-213ENST00000591955 U2AF1L5P0DN76 240 aaPredicted RBP6.83□□□□□ -1.32
NPC1-213ENST00000591955 NEFHP12036 1026 aa6.83□□□□□ -1.32
NPC1-213ENST00000591955 NFKB1P19838 968 aa6.83□□□□□ -1.32
NPC1-213ENST00000591955 MAP2K2P36507 400 aa6.83□□□□□ -1.32
NPC1-213ENST00000591955 CORO7P57737 925 aa6.83□□□□□ -1.32
NPC1-213ENST00000591955 U2AF1Q01081 240 aaKnown RBP eCLIP6.83□□□□□ -1.32
NPC1-213ENST00000591955 PLAURQ03405 335 aa6.83□□□□□ -1.32
NPC1-213ENST00000591955 PKP1Q13835 747 aa6.83□□□□□ -1.32
NPC1-213ENST00000591955 CCINQ13939 588 aa6.83□□□□□ -1.32
NPC1-213ENST00000591955 ELF2Q15723 593 aa6.83□□□□□ -1.32
NPC1-213ENST00000591955 PCSK7Q16549 785 aa6.83□□□□□ -1.32
NPC1-213ENST00000591955 RGL3Q3MIN7 710 aa6.83□□□□□ -1.32
NPC1-213ENST00000591955 WFDC8Q8IUA0 241 aa6.83□□□□□ -1.32
NPC1-213ENST00000591955 CCAR2Q8N163 923 aaKnown RBP6.83□□□□□ -1.32
NPC1-213ENST00000591955 TTC9Q92623 222 aa6.83□□□□□ -1.32
NPC1-213ENST00000591955 PNMA5Q96PV4 448 aa6.83□□□□□ -1.32
NPC1-213ENST00000591955 CARD10Q9BWT7 1032 aa6.83□□□□□ -1.32
NPC1-213ENST00000591955 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.83□□□□□ -1.32
NPC1-213ENST00000591955 PLCH1Q4KWH8 1693 aa6.83□□□□□ -1.32
NPC1-213ENST00000591955 TNS1Q9HBL0 1735 aaKnown RBP6.82□□□□□ -1.32
NPC1-213ENST00000591955 PPP1R12AO14974 1030 aaPredicted RBP6.82□□□□□ -1.32
NPC1-213ENST00000591955 IGSF3O75054 1194 aa6.82□□□□□ -1.32
NPC1-213ENST00000591955 HMGB1P09429 215 aaKnown RBP6.82□□□□□ -1.32
NPC1-213ENST00000591955 ZNF853P0CG23 659 aa6.82□□□□□ -1.32
NPC1-213ENST00000591955 SKILP12757 684 aa6.82□□□□□ -1.32
NPC1-213ENST00000591955 CPB1P15086 417 aa6.82□□□□□ -1.32
NPC1-213ENST00000591955 SDSP20132 328 aa6.82□□□□□ -1.32
NPC1-213ENST00000591955 CASTP20810 708 aaKnown RBP6.82□□□□□ -1.32
NPC1-213ENST00000591955 TDO2P48775 406 aa6.82□□□□□ -1.32
NPC1-213ENST00000591955 FZD5Q13467 585 aa6.82□□□□□ -1.32
NPC1-213ENST00000591955 SMC1AQ14683 1233 aaKnown RBP6.82□□□□□ -1.32
NPC1-213ENST00000591955 ANKRD1Q15327 319 aa6.82□□□□□ -1.32
NPC1-213ENST00000591955 STX1AQ16623 288 aa6.82□□□□□ -1.32
NPC1-213ENST00000591955 HIF1AQ16665 826 aa6.82□□□□□ -1.32
NPC1-213ENST00000591955 ARHGAP29Q52LW3 1261 aa6.82□□□□□ -1.32
NPC1-213ENST00000591955 CCDC93Q567U6 631 aa6.82□□□□□ -1.32
NPC1-213ENST00000591955 HSP90B2PQ58FF3 399 aa6.82□□□□□ -1.32
NPC1-213ENST00000591955 PERM1Q5SV97 790 aa6.82□□□□□ -1.32
NPC1-213ENST00000591955 FMNL3Q8IVF7 1028 aa6.82□□□□□ -1.32
NPC1-213ENST00000591955 TPCN2Q8NHX9 752 aa6.82□□□□□ -1.32
NPC1-213ENST00000591955 CTCFLQ8NI51 663 aaPredicted RBP6.82□□□□□ -1.32
NPC1-213ENST00000591955 TBC1D22AQ8WUA7 517 aa6.82□□□□□ -1.32
NPC1-213ENST00000591955 RABGGTAQ92696 567 aa6.82□□□□□ -1.32
NPC1-213ENST00000591955 CHMP4AQ9BY43 222 aa6.82□□□□□ -1.32
NPC1-213ENST00000591955 CLSTN2Q9H4D0 955 aa6.82□□□□□ -1.32
NPC1-213ENST00000591955 CXorf56Q9H5V9 222 aa6.82□□□□□ -1.32
NPC1-213ENST00000591955 AKTIPQ9H8T0 292 aa6.82□□□□□ -1.32
NPC1-213ENST00000591955 ATG3Q9NT62 314 aa6.82□□□□□ -1.32
NPC1-213ENST00000591955 TRPC5Q9UL62 973 aaPredicted RBP6.82□□□□□ -1.32
NPC1-213ENST00000591955 LIMCH1Q9UPQ0 1083 aa6.82□□□□□ -1.32
NPC1-213ENST00000591955 KIAA1024Q9UPX6 916 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms