RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 KIF5BP33176 963 aa13.23□□□□□ -0.29
TUBD1-211ENST00000591548 GUCY1B3Q02153 619 aa13.23□□□□□ -0.29
TUBD1-211ENST00000591548 SEPT2Q15019 361 aa13.23□□□□□ -0.29
TUBD1-211ENST00000591548 ABCB5Q2M3G0 1257 aa13.23□□□□□ -0.29
TUBD1-211ENST00000591548 ANGEL2Q5VTE6 544 aaKnown RBP13.23□□□□□ -0.29
TUBD1-211ENST00000591548 TMEM179Q6ZVK1 233 aa13.23□□□□□ -0.29
TUBD1-211ENST00000591548 MIGA2Q7L4E1 593 aa13.23□□□□□ -0.29
TUBD1-211ENST00000591548 SIAH1Q8IUQ4 282 aa13.23□□□□□ -0.29
TUBD1-211ENST00000591548 TRIM22Q8IYM9 498 aa13.23□□□□□ -0.29
TUBD1-211ENST00000591548 FBXO18Q8NFZ0 1043 aa13.23□□□□□ -0.29
TUBD1-211ENST00000591548 C8orf76Q96K31 380 aa13.23□□□□□ -0.29
TUBD1-211ENST00000591548 RNF26Q9BY78 433 aaPredicted RBP13.23□□□□□ -0.29
TUBD1-211ENST00000591548 DEFB129Q9H1M3 183 aa13.23□□□□□ -0.29
TUBD1-211ENST00000591548 MTMR7Q9Y216 660 aa13.23□□□□□ -0.29
TUBD1-211ENST00000591548 PALM3A6NDB9 673 aaPredicted RBP13.22□□□□□ -0.29
TUBD1-211ENST00000591548 SOCS7O14512 581 aa13.22□□□□□ -0.29
TUBD1-211ENST00000591548 GRIN3BO60391 1043 aa13.22□□□□□ -0.29
TUBD1-211ENST00000591548 GH2P01242 217 aa13.22□□□□□ -0.29
TUBD1-211ENST00000591548 RESTQ13127 1097 aa13.22□□□□□ -0.29
TUBD1-211ENST00000591548 MCTP1Q6DN14 999 aa13.22□□□□□ -0.29
TUBD1-211ENST00000591548 LRRC47Q8N1G4 583 aaKnown RBP13.22□□□□□ -0.29
TUBD1-211ENST00000591548 KANSL2Q9H9L4 492 aa13.22□□□□□ -0.29
TUBD1-211ENST00000591548 V9GY48 417 aaPredicted RBP13.22□□□□□ -0.29
TUBD1-211ENST00000591548 CNTNAP5Q8WYK1 1306 aa13.22□□□□□ -0.29
TUBD1-211ENST00000591548 USP17L5A8MUK1 530 aa13.21□□□□□ -0.29
TUBD1-211ENST00000591548 PRPF3O43395 683 aaKnown RBP13.21□□□□□ -0.29
TUBD1-211ENST00000591548 DEXIO95424 95 aa13.21□□□□□ -0.29
TUBD1-211ENST00000591548 GOLGA8HP0CJ92 632 aa13.21□□□□□ -0.29
TUBD1-211ENST00000591548 EEF2P13639 858 aaKnown RBP13.21□□□□□ -0.29
TUBD1-211ENST00000591548 PKN1Q16512 942 aa13.21□□□□□ -0.29
TUBD1-211ENST00000591548 SLC35G1Q2M3R5 365 aa13.21□□□□□ -0.29
TUBD1-211ENST00000591548 FAM173BQ6P4H8 233 aa13.21□□□□□ -0.29
TUBD1-211ENST00000591548 USP17L2Q6R6M4 530 aa13.21□□□□□ -0.29
TUBD1-211ENST00000591548 RGS22Q8NE09 1264 aa13.21□□□□□ -0.29
TUBD1-211ENST00000591548 MKL1Q969V6 931 aa13.21□□□□□ -0.29
TUBD1-211ENST00000591548 NYAP2Q9P242 653 aa13.21□□□□□ -0.29
TUBD1-211ENST00000591548 ATP6V1DQ9Y5K8 247 aa13.21□□□□□ -0.29
TUBD1-211ENST00000591548 hCG_1642624A0A1W2PR95 340 aa13.2□□□□□ -0.3
TUBD1-211ENST00000591548 DDX11L8A8MPP1 907 aa13.2□□□□□ -0.3
TUBD1-211ENST00000591548 SNHG28P0DPA3 235 aa13.2□□□□□ -0.3
TUBD1-211ENST00000591548 PDHBP11177 359 aa13.2□□□□□ -0.3
TUBD1-211ENST00000591548 ATP2B2Q01814 1243 aa13.2□□□□□ -0.3
TUBD1-211ENST00000591548 PPP4R3BQ5MIZ7 849 aa13.2□□□□□ -0.3
TUBD1-211ENST00000591548 KRT40Q6A162 431 aa13.2□□□□□ -0.3
TUBD1-211ENST00000591548 WASF1Q92558 559 aa13.2□□□□□ -0.3
TUBD1-211ENST00000591548 ADARB2Q9NS39 739 aaKnown RBP13.2□□□□□ -0.3
TUBD1-211ENST00000591548 GGA3Q9NZ52 723 aa13.2□□□□□ -0.3
TUBD1-211ENST00000591548 PHF20L1A8MW92 1017 aa13.2□□□□□ -0.3
TUBD1-211ENST00000591548 KLRF2D3W0D1 207 aa13.2□□□□□ -0.3
TUBD1-211ENST00000591548 CYTH3O43739 400 aa13.2□□□□□ -0.3
TUBD1-211ENST00000591548 PARP1P09874 1014 aaKnown RBP13.2□□□□□ -0.3
TUBD1-211ENST00000591548 LMOD1P29536 600 aaPredicted RBP13.2□□□□□ -0.3
TUBD1-211ENST00000591548 GNAQP50148 359 aa13.2□□□□□ -0.3
TUBD1-211ENST00000591548 ICA1Q05084 483 aa13.2□□□□□ -0.3
TUBD1-211ENST00000591548 DNM1Q05193 864 aaKnown RBP13.2□□□□□ -0.3
TUBD1-211ENST00000591548 NBPF12Q5TAG4 269 aaPredicted RBP13.2□□□□□ -0.3
TUBD1-211ENST00000591548 DPY19L2Q6NUT2 758 aa13.2□□□□□ -0.3
TUBD1-211ENST00000591548 APOBEC3FQ8IUX4 373 aaKnown RBP13.2□□□□□ -0.3
TUBD1-211ENST00000591548 SHISA4Q96DD7 197 aa13.2□□□□□ -0.3
TUBD1-211ENST00000591548 L3MBTL3Q96JM7 780 aaPredicted RBP13.2□□□□□ -0.3
TUBD1-211ENST00000591548 ZSCAN16Q9H4T2 348 aaPredicted RBP13.2□□□□□ -0.3
TUBD1-211ENST00000591548 CABP5Q9NP86 173 aa13.2□□□□□ -0.3
TUBD1-211ENST00000591548 VEGFAP15692 232 aaPredicted RBP13.19□□□□□ -0.3
TUBD1-211ENST00000591548 CAP2P40123 477 aa13.19□□□□□ -0.3
TUBD1-211ENST00000591548 AKAP17AQ02040 695 aaKnown RBP13.19□□□□□ -0.3
TUBD1-211ENST00000591548 CPVLQ9H3G5 476 aa13.19□□□□□ -0.3
TUBD1-211ENST00000591548 ZBTB21Q9ULJ3 1066 aa13.19□□□□□ -0.3
TUBD1-211ENST00000591548 CNPY2Q9Y2B0 182 aa13.19□□□□□ -0.3
TUBD1-211ENST00000591548 MYH4Q9Y623 1939 aa13.18□□□□□ -0.3
TUBD1-211ENST00000591548 FRMPD2Q68DX3 1309 aaPredicted RBP13.18□□□□□ -0.3
TUBD1-211ENST00000591548 ZC3H4Q9UPT8 1303 aaKnown RBP13.18□□□□□ -0.3
TUBD1-211ENST00000591548 A0A1W2PRG0 241 aa13.18□□□□□ -0.3
TUBD1-211ENST00000591548 KIF28PB7ZC32 967 aa13.18□□□□□ -0.3
TUBD1-211ENST00000591548 GOLGA6L22H0YM25 854 aa13.18□□□□□ -0.3
TUBD1-211ENST00000591548 KIF23Q02241 960 aaPredicted RBP13.18□□□□□ -0.3
TUBD1-211ENST00000591548 PRAMEF18Q5VWM3 479 aa13.18□□□□□ -0.3
TUBD1-211ENST00000591548 LZTS2Q9BRK4 669 aa13.18□□□□□ -0.3
TUBD1-211ENST00000591548 GDPD2Q9HCC8 539 aa13.18□□□□□ -0.3
TUBD1-211ENST00000591548 LMBRD1Q9NUN5 540 aa13.18□□□□□ -0.3
TUBD1-211ENST00000591548 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.18□□□□□ -0.3
TUBD1-211ENST00000591548 PITPNM2Q9BZ72 1349 aa13.17□□□□□ -0.3
TUBD1-211ENST00000591548 GLTPD2A6NH11 291 aa13.17□□□□□ -0.3
TUBD1-211ENST00000591548 PRPF40AO75400 957 aaKnown RBP13.17□□□□□ -0.3
TUBD1-211ENST00000591548 SMARCA1P28370 1054 aa13.17□□□□□ -0.3
TUBD1-211ENST00000591548 ZNF543Q08ER8 600 aa13.17□□□□□ -0.3
TUBD1-211ENST00000591548 TRIM29Q14134 588 aa13.17□□□□□ -0.3
TUBD1-211ENST00000591548 PFKFB3Q16875 520 aaPredicted RBP13.17□□□□□ -0.3
TUBD1-211ENST00000591548 ASPRV1Q53RT3 343 aa13.17□□□□□ -0.3
TUBD1-211ENST00000591548 PIBF1Q8WXW3 757 aa13.17□□□□□ -0.3
TUBD1-211ENST00000591548 SPZ1Q9BXG8 430 aa13.17□□□□□ -0.3
TUBD1-211ENST00000591548 KCNJ14Q9UNX9 436 aa13.17□□□□□ -0.3
TUBD1-211ENST00000591548 MYH6P13533 1939 aa13.17□□□□□ -0.3
TUBD1-211ENST00000591548 F5H6K3 240 aa13.16□□□□□ -0.3
TUBD1-211ENST00000591548 MMP1P03956 469 aa13.16□□□□□ -0.3
TUBD1-211ENST00000591548 SCG2P13521 617 aa13.16□□□□□ -0.3
TUBD1-211ENST00000591548 ECE1P42892 770 aa13.16□□□□□ -0.3
TUBD1-211ENST00000591548 KLRC3Q07444 240 aa13.16□□□□□ -0.3
TUBD1-211ENST00000591548 GMCL1P1Q8NEA9 526 aa13.16□□□□□ -0.3
TUBD1-211ENST00000591548 ACER1Q8TDN7 264 aa13.16□□□□□ -0.3
TUBD1-211ENST00000591548 ANP32EQ9BTT0 268 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms