RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 RBSNQ9H1K0 784 aa14.81□□□□□ -0.04
SMARCA4-216ENST00000591545 SWAP70Q9UH65 585 aa14.81□□□□□ -0.04
SMARCA4-216ENST00000591545 SPHKAPQ2M3C7 1700 aa14.81□□□□□ -0.04
SMARCA4-216ENST00000591545 CUTAO60888 179 aa14.81□□□□□ -0.04
SMARCA4-216ENST00000591545 FLOT1O75955 427 aa14.81□□□□□ -0.04
SMARCA4-216ENST00000591545 TTC38Q5R3I4 469 aa14.81□□□□□ -0.04
SMARCA4-216ENST00000591545 ARHGEF16Q5VV41 709 aa14.81□□□□□ -0.04
SMARCA4-216ENST00000591545 TRMT2AQ8IZ69 625 aaKnown RBP14.81□□□□□ -0.04
SMARCA4-216ENST00000591545 ZNF710Q8N1W2 664 aa14.81□□□□□ -0.04
SMARCA4-216ENST00000591545 DBNDD1Q9H9R9 158 aa14.81□□□□□ -0.04
SMARCA4-216ENST00000591545 NKIRAS1Q9NYS0 192 aa14.81□□□□□ -0.04
SMARCA4-216ENST00000591545 LRWD1Q9UFC0 647 aa14.81□□□□□ -0.04
SMARCA4-216ENST00000591545 ZEB2O60315 1214 aa14.81□□□□□ -0.04
SMARCA4-216ENST00000591545 CIAO1O76071 339 aa14.81□□□□□ -0.04
SMARCA4-216ENST00000591545 OSBPP22059 807 aa14.81□□□□□ -0.04
SMARCA4-216ENST00000591545 ANO1Q5XXA6 986 aa14.81□□□□□ -0.04
SMARCA4-216ENST00000591545 NCAPG2Q86XI2 1143 aa14.81□□□□□ -0.04
SMARCA4-216ENST00000591545 POTEDQ86YR6 584 aa14.81□□□□□ -0.04
SMARCA4-216ENST00000591545 IGSF22Q8N9C0 903 aa14.81□□□□□ -0.04
SMARCA4-216ENST00000591545 DNM3Q9UQ16 869 aa14.81□□□□□ -0.04
SMARCA4-216ENST00000591545 ARID5AQ03989 594 aa14.8□□□□□ -0.04
SMARCA4-216ENST00000591545 PPP1R7Q15435 360 aa14.8□□□□□ -0.04
SMARCA4-216ENST00000591545 CCDC14Q49A88 953 aa14.8□□□□□ -0.04
SMARCA4-216ENST00000591545 LRRC24Q50LG9 513 aa14.8□□□□□ -0.04
SMARCA4-216ENST00000591545 GPR161Q8N6U8 529 aaKnown RBP14.8□□□□□ -0.04
SMARCA4-216ENST00000591545 PPFIBP2Q8ND30 876 aa14.8□□□□□ -0.04
SMARCA4-216ENST00000591545 RAB3IL1Q8TBN0 382 aa14.8□□□□□ -0.04
SMARCA4-216ENST00000591545 ZFP91Q96JP5 570 aaPredicted RBP14.8□□□□□ -0.04
SMARCA4-216ENST00000591545 GJD4Q96KN9 370 aaPredicted RBP14.8□□□□□ -0.04
SMARCA4-216ENST00000591545 CLRN2A0PK11 232 aa14.8□□□□□ -0.04
SMARCA4-216ENST00000591545 USP14P54578 494 aa14.8□□□□□ -0.04
SMARCA4-216ENST00000591545 CLUL1Q15846 466 aa14.8□□□□□ -0.04
SMARCA4-216ENST00000591545 SPOUT1Q5T280 376 aaKnown RBP14.8□□□□□ -0.04
SMARCA4-216ENST00000591545 MYRIPQ8NFW9 859 aa14.8□□□□□ -0.04
SMARCA4-216ENST00000591545 COPRSQ9NQ92 184 aa14.8□□□□□ -0.04
SMARCA4-216ENST00000591545 TRAF5O00463 557 aa14.8□□□□□ -0.04
SMARCA4-216ENST00000591545 ADRA2BP18089 450 aa14.8□□□□□ -0.04
SMARCA4-216ENST00000591545 ZNF75DP51815 510 aa14.8□□□□□ -0.04
SMARCA4-216ENST00000591545 CNNM4Q6P4Q7 775 aa14.8□□□□□ -0.04
SMARCA4-216ENST00000591545 CCDC50Q8IVM0 306 aa14.8□□□□□ -0.04
SMARCA4-216ENST00000591545 IFNL3Q8IZI9 196 aa14.8□□□□□ -0.04
SMARCA4-216ENST00000591545 IQCDQ96DY2 449 aa14.8□□□□□ -0.04
SMARCA4-216ENST00000591545 TRIM7Q9C029 511 aa14.8□□□□□ -0.04
SMARCA4-216ENST00000591545 KCTD2Q14681 263 aa14.8□□□□□ -0.04
SMARCA4-216ENST00000591545 CEP57Q86XR8 500 aa14.8□□□□□ -0.04
SMARCA4-216ENST00000591545 SNX29Q8TEQ0 813 aa14.8□□□□□ -0.04
SMARCA4-216ENST00000591545 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.8□□□□□ -0.04
SMARCA4-216ENST00000591545 PLCB3Q01970 1234 aa14.79□□□□□ -0.04
SMARCA4-216ENST00000591545 OTUD6AQ7L8S5 288 aa14.79□□□□□ -0.04
SMARCA4-216ENST00000591545 CSRNP1Q96S65 589 aa14.79□□□□□ -0.04
SMARCA4-216ENST00000591545 ABT1Q9ULW3 272 aaKnown RBP14.79□□□□□ -0.04
SMARCA4-216ENST00000591545 ATP10DQ9P241 1426 aa14.79□□□□□ -0.04
SMARCA4-216ENST00000591545 ACTN4O43707 911 aaKnown RBP14.79□□□□□ -0.04
SMARCA4-216ENST00000591545 SLC27A3Q5K4L6 730 aa14.79□□□□□ -0.04
SMARCA4-216ENST00000591545 TMTC1Q8IUR5 882 aa14.79□□□□□ -0.04
SMARCA4-216ENST00000591545 SRP68Q9UHB9 627 aaKnown RBP14.79□□□□□ -0.04
SMARCA4-216ENST00000591545 A0A1B0GVL5 298 aa14.79□□□□□ -0.04
SMARCA4-216ENST00000591545 ARHGAP6O43182 974 aa14.79□□□□□ -0.04
SMARCA4-216ENST00000591545 STX10O60499 249 aa14.79□□□□□ -0.04
SMARCA4-216ENST00000591545 RAD17O75943 681 aa14.79□□□□□ -0.04
SMARCA4-216ENST00000591545 DCAF17Q5H9S7 520 aaPredicted RBP14.79□□□□□ -0.04
SMARCA4-216ENST00000591545 PPP1R9BQ96SB3 815 aa14.79□□□□□ -0.04
SMARCA4-216ENST00000591545 NOC4LQ9BVI4 516 aaKnown RBP14.79□□□□□ -0.04
SMARCA4-216ENST00000591545 NBPF3Q9H094 633 aa14.79□□□□□ -0.04
SMARCA4-216ENST00000591545 PCP11498 1178 aaKnown RBP14.79□□□□□ -0.04
SMARCA4-216ENST00000591545 GRAPQ13588 217 aa14.79□□□□□ -0.04
SMARCA4-216ENST00000591545 NLRP10Q86W26 655 aa14.79□□□□□ -0.04
SMARCA4-216ENST00000591545 CCDC63Q8NA47 563 aa14.79□□□□□ -0.04
SMARCA4-216ENST00000591545 GRAPLQ8TC17 118 aaPredicted RBP14.79□□□□□ -0.04
SMARCA4-216ENST00000591545 GPR108Q9NPR9 543 aa14.79□□□□□ -0.04
SMARCA4-216ENST00000591545 POLR2MP0CAP2 368 aa14.79□□□□□ -0.04
SMARCA4-216ENST00000591545 CPA1P15085 419 aa14.79□□□□□ -0.04
SMARCA4-216ENST00000591545 TBC1D8BQ0IIM8 1120 aa14.79□□□□□ -0.04
SMARCA4-216ENST00000591545 CALCRLQ16602 461 aa14.79□□□□□ -0.04
SMARCA4-216ENST00000591545 MAP7D1Q3KQU3 841 aa14.79□□□□□ -0.04
SMARCA4-216ENST00000591545 SLFN13Q68D06 897 aa14.79□□□□□ -0.04
SMARCA4-216ENST00000591545 INTS8Q75QN2 995 aaKnown RBP14.79□□□□□ -0.04
SMARCA4-216ENST00000591545 TXNDC16Q9P2K2 825 aa14.79□□□□□ -0.04
SMARCA4-216ENST00000591545 KCNH3Q9ULD8 1083 aa14.79□□□□□ -0.04
SMARCA4-216ENST00000591545 TESPA1A2RU30 521 aaPredicted RBP14.78□□□□□ -0.04
SMARCA4-216ENST00000591545 C8orf74Q6P047 294 aa14.78□□□□□ -0.04
SMARCA4-216ENST00000591545 GBP6Q6ZN66 633 aa14.78□□□□□ -0.04
SMARCA4-216ENST00000591545 DPP9Q86TI2 863 aa14.78□□□□□ -0.04
SMARCA4-216ENST00000591545 MYL10Q9BUA6 226 aa14.78□□□□□ -0.04
SMARCA4-216ENST00000591545 TSKSQ9UJT2 592 aa14.78□□□□□ -0.04
SMARCA4-216ENST00000591545 MADDQ8WXG6 1647 aa14.78□□□□□ -0.04
SMARCA4-216ENST00000591545 TMEM110-MUSTN1A8MSY1 372 aa14.78□□□□□ -0.04
SMARCA4-216ENST00000591545 IREB2P48200 963 aaKnown RBP14.78□□□□□ -0.04
SMARCA4-216ENST00000591545 SNX16P57768 344 aa14.78□□□□□ -0.04
SMARCA4-216ENST00000591545 FANCCQ00597 558 aa14.78□□□□□ -0.04
SMARCA4-216ENST00000591545 PDE4DQ08499 809 aa14.78□□□□□ -0.04
SMARCA4-216ENST00000591545 CALUO43852 315 aaPredicted RBP14.78□□□□□ -0.04
SMARCA4-216ENST00000591545 GAS7O60861 476 aa14.78□□□□□ -0.04
SMARCA4-216ENST00000591545 UBE3CQ15386 1083 aa14.78□□□□□ -0.04
SMARCA4-216ENST00000591545 FBXO11Q86XK2 927 aa14.78□□□□□ -0.04
SMARCA4-216ENST00000591545 SNX14Q9Y5W7 946 aa14.78□□□□□ -0.04
SMARCA4-216ENST00000591545 ABCC4O15439 1325 aa14.78□□□□□ -0.04
SMARCA4-216ENST00000591545 E9PCH4 1651 aa14.78□□□□□ -0.04
SMARCA4-216ENST00000591545 TLDC2A0PJX2 215 aa14.78□□□□□ -0.04
SMARCA4-216ENST00000591545 NLRP12P59046 1061 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms