RNA–Protein interactions for RNA: ENST00000591097.5

CIRBP-231, Transcript of cold inducible RNA binding protein, human

TSL 1 (best)

Gene CIRBP, Length 1,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-231	ENST00000591097	USP17L18	D6R9N7	530 aa		27.62	■■■□□ 2.01
CIRBP-231	ENST00000591097	USP17L22	D6RA61	530 aa		27.62	■■■□□ 2.01
CIRBP-231	ENST00000591097	USP17L17	D6RBQ6	530 aa		27.62	■■■□□ 2.01
CIRBP-231	ENST00000591097	USP17L19	D6RCP7	530 aa		27.62	■■■□□ 2.01
CIRBP-231	ENST00000591097	USP17L20	D6RJB6	530 aa		27.62	■■■□□ 2.01
CIRBP-231	ENST00000591097	CDC45	O75419	566 aa		27.62	■■■□□ 2.01
CIRBP-231	ENST00000591097	LACTB	P83111	547 aa	Predicted RBP	27.62	■■■□□ 2.01
CIRBP-231	ENST00000591097	USP17L24	Q0WX57	530 aa		27.62	■■■□□ 2.01
CIRBP-231	ENST00000591097	MAP4K1	Q92918	833 aa		27.62	■■■□□ 2.01
CIRBP-231	ENST00000591097	ERO1A	Q96HE7	468 aa		27.62	■■■□□ 2.01
CIRBP-231	ENST00000591097	P2RX7	Q99572	595 aa	Known RBP	27.62	■■■□□ 2.01
CIRBP-231	ENST00000591097	RPAP3	Q9H6T3	665 aa	Predicted RBP	27.62	■■■□□ 2.01
CIRBP-231	ENST00000591097	ZSWIM8	A7E2V4	1837 aa		27.62	■■■□□ 2.01
CIRBP-231	ENST00000591097	TTLL1	O95922	423 aa		27.62	■■■□□ 2.01
CIRBP-231	ENST00000591097	NOV	P48745	357 aa		27.62	■■■□□ 2.01
CIRBP-231	ENST00000591097	HERVK_113	P62684	666 aa		27.62	■■■□□ 2.01
CIRBP-231	ENST00000591097	POTEE	Q6S8J3	1075 aa		27.62	■■■□□ 2.01
CIRBP-231	ENST00000591097	CATSPERG	Q6ZRH7	1159 aa		27.62	■■■□□ 2.01
CIRBP-231	ENST00000591097	CTU1	Q7Z7A3	348 aa	Known RBP	27.62	■■■□□ 2.01
CIRBP-231	ENST00000591097	SPICE1	Q8N0Z3	855 aa		27.62	■■■□□ 2.01
CIRBP-231	ENST00000591097	LSG1	Q9H089	658 aa	Known RBP	27.62	■■■□□ 2.01
CIRBP-231	ENST00000591097	SYNPO2	Q9UMS6	1093 aa		27.62	■■■□□ 2.01
CIRBP-231	ENST00000591097	NMT2	O60551	498 aa		27.61	■■■□□ 2.01
CIRBP-231	ENST00000591097	GCLC	P48506	637 aa	Predicted RBP	27.61	■■■□□ 2.01
CIRBP-231	ENST00000591097	RRP12	Q5JTH9	1297 aa	Known RBP	27.61	■■■□□ 2.01
CIRBP-231	ENST00000591097	TOMM22	Q9NS69	142 aa		27.61	■■■□□ 2.01
CIRBP-231	ENST00000591097	CLIP2	Q9UDT6	1046 aa		27.61	■■■□□ 2.01
CIRBP-231	ENST00000591097		U3KPZ7	1027 aa	Predicted RBP	27.61	■■■□□ 2.01
CIRBP-231	ENST00000591097	RLF	Q13129	1914 aa		27.6	■■■□□ 2.01
CIRBP-231	ENST00000591097	FAM110C	Q1W6H9	321 aa		27.6	■■■□□ 2.01
CIRBP-231	ENST00000591097	GOPC	Q9HD26	462 aa		27.6	■■■□□ 2.01
CIRBP-231	ENST00000591097	WDR46	O15213	610 aa	Known RBP	27.59	■■■□□ 2.01
CIRBP-231	ENST00000591097	CYP21A2	P08686	494 aa		27.59	■■■□□ 2.01
CIRBP-231	ENST00000591097	CTGF	P29279	349 aa		27.59	■■■□□ 2.01
CIRBP-231	ENST00000591097	ANKRD13C	Q8N6S4	541 aa		27.59	■■■□□ 2.01
CIRBP-231	ENST00000591097	ARHGAP39	Q9C0H5	1083 aa		27.59	■■■□□ 2.01
CIRBP-231	ENST00000591097	NT5C2	P49902	561 aa		27.58	■■■□□ 2.01
CIRBP-231	ENST00000591097	OTOP1	Q7RTM1	612 aa		27.58	■■■□□ 2.01
CIRBP-231	ENST00000591097	TCP11L1	Q9NUJ3	509 aa		27.58	■■■□□ 2.01
CIRBP-231	ENST00000591097	MORF4L1	Q9UBU8	362 aa		27.58	■■■□□ 2.01
CIRBP-231	ENST00000591097	PARP14	Q460N5	1801 aa		27.58	■■■□□ 2
CIRBP-231	ENST00000591097		F5H6K3	240 aa		27.57	■■■□□ 2
CIRBP-231	ENST00000591097	KLRC3	Q07444	240 aa		27.57	■■■□□ 2
CIRBP-231	ENST00000591097	LBX2	Q6XYB7	198 aa		27.57	■■■□□ 2
CIRBP-231	ENST00000591097	TNS4	Q8IZW8	715 aa		27.57	■■■□□ 2
CIRBP-231	ENST00000591097	LRRC47	Q8N1G4	583 aa	Known RBP	27.57	■■■□□ 2
CIRBP-231	ENST00000591097	MCOLN1	Q9GZU1	580 aa		27.57	■■■□□ 2
CIRBP-231	ENST00000591097	TXNRD2	Q9NNW7	524 aa		27.57	■■■□□ 2
CIRBP-231	ENST00000591097	RBM8A	Q9Y5S9	174 aa	Known RBP	27.57	■■■□□ 2
CIRBP-231	ENST00000591097	NDUFB10	O96000	172 aa		27.57	■■■□□ 2
CIRBP-231	ENST00000591097	PPP4R3B	Q5MIZ7	849 aa		27.57	■■■□□ 2
CIRBP-231	ENST00000591097	CASC1	Q6TDU7	716 aa		27.57	■■■□□ 2
CIRBP-231	ENST00000591097	KIAA1211	Q6ZU35	1233 aa		27.57	■■■□□ 2
CIRBP-231	ENST00000591097	GMCL1P1	Q8NEA9	526 aa		27.57	■■■□□ 2
CIRBP-231	ENST00000591097	ESR2	Q92731	530 aa		27.57	■■■□□ 2
CIRBP-231	ENST00000591097	TANGO6	Q9C0B7	1094 aa		27.57	■■■□□ 2
CIRBP-231	ENST00000591097	RBPJL	Q9UBG7	517 aa		27.57	■■■□□ 2
CIRBP-231	ENST00000591097	STX8	Q9UNK0	236 aa		27.57	■■■□□ 2
CIRBP-231	ENST00000591097	TAF6L	Q9Y6J9	622 aa		27.57	■■■□□ 2
CIRBP-231	ENST00000591097	SPDYE16	A6NNV3	312 aa	Predicted RBP	27.56	■■■□□ 2
CIRBP-231	ENST00000591097	TRIM47	Q96LD4	638 aa		27.56	■■■□□ 2
CIRBP-231	ENST00000591097	TRIM17	Q9Y577	477 aa		27.56	■■■□□ 2
CIRBP-231	ENST00000591097		A0A0G2JMZ2	1700 aa		27.55	■■■□□ 2
CIRBP-231	ENST00000591097	PEX10	O60683	326 aa		27.55	■■■□□ 2
CIRBP-231	ENST00000591097	GTF3C2	Q8WUA4	911 aa	Predicted RBP	27.55	■■■□□ 2
CIRBP-231	ENST00000591097	EFCC1	Q9HA90	598 aa		27.55	■■■□□ 2
CIRBP-231	ENST00000591097	ANO2	Q9NQ90	1003 aa		27.55	■■■□□ 2
CIRBP-231	ENST00000591097		B4E1Z4	1266 aa		27.54	■■■□□ 2
CIRBP-231	ENST00000591097	KDM4A	O75164	1064 aa		27.54	■■■□□ 2
CIRBP-231	ENST00000591097	COG2	Q14746	738 aa		27.54	■■■□□ 2
CIRBP-231	ENST00000591097	RCSD1	Q6JBY9	416 aa		27.54	■■■□□ 2
CIRBP-231	ENST00000591097	MGAM	O43451	1857 aa		27.53	■■■□□ 2
CIRBP-231	ENST00000591097	PSMC4	P43686	418 aa		27.53	■■■□□ 2
CIRBP-231	ENST00000591097	KIF22	Q14807	665 aa		27.53	■■■□□ 2
CIRBP-231	ENST00000591097	PKN2	Q16513	984 aa	Known RBP	27.53	■■■□□ 2
CIRBP-231	ENST00000591097	FAM83B	Q5T0W9	1011 aa		27.53	■■■□□ 2
CIRBP-231	ENST00000591097	NUP88	Q99567	741 aa	Predicted RBP	27.53	■■■□□ 2
CIRBP-231	ENST00000591097	CNNM2	Q9H8M5	875 aa		27.53	■■■□□ 2
CIRBP-231	ENST00000591097	CNMD	O75829	334 aa		27.52	■■■□□ 2
CIRBP-231	ENST00000591097	KRT23	Q9C075	422 aa		27.52	■■■□□ 2
CIRBP-231	ENST00000591097	HOXC10	Q9NYD6	342 aa		27.52	■■■□□ 2
CIRBP-231	ENST00000591097	ZSWIM5	Q9P217	1185 aa		27.52	■■■□□ 2
CIRBP-231	ENST00000591097	MYPN	Q86TC9	1320 aa		27.52	■■■□□ 2
CIRBP-231	ENST00000591097	BRCA2	P51587	3418 aa		27.52	■■■□□ 2
CIRBP-231	ENST00000591097	RAD21	O60216	631 aa		27.51	■■■□□ 2
CIRBP-231	ENST00000591097	FLOT1	O75955	427 aa		27.51	■■■□□ 2
CIRBP-231	ENST00000591097	GNRH1	P01148	92 aa		27.51	■■■□□ 2
CIRBP-231	ENST00000591097	STOX1	Q6ZVD7	989 aa		27.51	■■■□□ 2
CIRBP-231	ENST00000591097	FBXO28	Q9NVF7	368 aa		27.51	■■■□□ 2
CIRBP-231	ENST00000591097	RABGAP1	Q9Y3P9	1069 aa		27.51	■■■□□ 2
CIRBP-231	ENST00000591097	DSG3	P32926	999 aa		27.51	■■□□□ 1.99
CIRBP-231	ENST00000591097	ERVK-9	P63128	1117 aa		27.51	■■□□□ 1.99
CIRBP-231	ENST00000591097	ERVK-24	P63145	666 aa		27.51	■■□□□ 1.99
CIRBP-231	ENST00000591097	ARHGEF6	Q15052	776 aa		27.51	■■□□□ 1.99
CIRBP-231	ENST00000591097	NECTIN1	Q15223	517 aa		27.51	■■□□□ 1.99
CIRBP-231	ENST00000591097	GPRC5A	Q8NFJ5	357 aa		27.51	■■□□□ 1.99
CIRBP-231	ENST00000591097	TTC14	Q96N46	770 aa		27.51	■■□□□ 1.99
CIRBP-231	ENST00000591097		E7EWF7	191 aa		27.5	■■□□□ 1.99
CIRBP-231	ENST00000591097	ECM2	O94769	699 aa	Predicted RBP	27.5	■■□□□ 1.99
CIRBP-231	ENST00000591097		Q3C1V9	767 aa		27.5	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms