RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 ERVK-24P63145 666 aa25.52■■□□□ 1.68
LRP3-202ENST00000590275 PAGR1Q9BTK6 254 aa25.52■■□□□ 1.68
LRP3-202ENST00000590275 HELLSQ9NRZ9 838 aa25.52■■□□□ 1.68
LRP3-202ENST00000590275 PPARAQ07869 468 aa25.51■■□□□ 1.67
LRP3-202ENST00000590275 GPRC5AQ8NFJ5 357 aa25.51■■□□□ 1.67
LRP3-202ENST00000590275 VCPKMTQ9H867 229 aa25.51■■□□□ 1.67
LRP3-202ENST00000590275 GREB1LQ9C091 1923 aaPredicted RBP25.51■■□□□ 1.67
LRP3-202ENST00000590275 SDSP20132 328 aa25.5■■□□□ 1.67
LRP3-202ENST00000590275 NAPBQ9H115 298 aa25.5■■□□□ 1.67
LRP3-202ENST00000590275 KANSL2Q9H9L4 492 aa25.5■■□□□ 1.67
LRP3-202ENST00000590275 MKNK2Q9HBH9 465 aa25.5■■□□□ 1.67
LRP3-202ENST00000590275 ATP2B2Q01814 1243 aa25.49■■□□□ 1.67
LRP3-202ENST00000590275 CTDSPL2Q05D32 466 aa25.49■■□□□ 1.67
LRP3-202ENST00000590275 IRF5Q13568 498 aa25.49■■□□□ 1.67
LRP3-202ENST00000590275 MCMDC2Q4G0Z9 681 aa25.49■■□□□ 1.67
LRP3-202ENST00000590275 LBX2Q6XYB7 198 aa25.49■■□□□ 1.67
LRP3-202ENST00000590275 ADCY3O60266 1144 aa25.48■■□□□ 1.67
LRP3-202ENST00000590275 GSPT1P15170 499 aaKnown RBP25.48■■□□□ 1.67
LRP3-202ENST00000590275 NBPF11Q86T75 865 aa25.48■■□□□ 1.67
LRP3-202ENST00000590275 NKX2-3Q8TAU0 364 aa25.48■■□□□ 1.67
LRP3-202ENST00000590275 NACAP1Q9BZK3 213 aa25.48■■□□□ 1.67
LRP3-202ENST00000590275 ARHGEF10LQ9HCE6 1279 aa25.48■■□□□ 1.67
LRP3-202ENST00000590275 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.48■■□□□ 1.67
LRP3-202ENST00000590275 RABGAP1Q9Y3P9 1069 aa25.48■■□□□ 1.67
LRP3-202ENST00000590275 FAM47AQ5JRC9 791 aa25.47■■□□□ 1.67
LRP3-202ENST00000590275 COA7Q96BR5 231 aa25.47■■□□□ 1.67
LRP3-202ENST00000590275 IL25Q9H293 177 aa25.47■■□□□ 1.67
LRP3-202ENST00000590275 FBXO28Q9NVF7 368 aa25.47■■□□□ 1.67
LRP3-202ENST00000590275 RLFQ13129 1914 aa25.47■■□□□ 1.67
LRP3-202ENST00000590275 PLXNB2O15031 1838 aa25.47■■□□□ 1.67
LRP3-202ENST00000590275 FGAP02671 866 aa25.46■■□□□ 1.67
LRP3-202ENST00000590275 TRIM32Q13049 653 aa25.46■■□□□ 1.67
LRP3-202ENST00000590275 ALX1Q15699 326 aa25.46■■□□□ 1.67
LRP3-202ENST00000590275 USP6NLQ92738 828 aa25.46■■□□□ 1.67
LRP3-202ENST00000590275 CEP95Q96GE4 821 aa25.46■■□□□ 1.67
LRP3-202ENST00000590275 TANGO6Q9C0B7 1094 aa25.46■■□□□ 1.67
LRP3-202ENST00000590275 DOCK3Q8IZD9 2030 aa25.46■■□□□ 1.67
LRP3-202ENST00000590275 HSPD1P10809 573 aaKnown RBP25.45■■□□□ 1.66
LRP3-202ENST00000590275 COG2Q14746 738 aa25.45■■□□□ 1.66
LRP3-202ENST00000590275 SLAIN1Q8ND83 568 aa25.45■■□□□ 1.66
LRP3-202ENST00000590275 LPAR1Q92633 364 aa25.45■■□□□ 1.66
LRP3-202ENST00000590275 SHISA4Q96DD7 197 aa25.45■■□□□ 1.66
LRP3-202ENST00000590275 ATG4CQ96DT6 458 aa25.45■■□□□ 1.66
LRP3-202ENST00000590275 NUP88Q99567 741 aaPredicted RBP25.45■■□□□ 1.66
LRP3-202ENST00000590275 NBPF3Q9H094 633 aa25.45■■□□□ 1.66
LRP3-202ENST00000590275 NYAP2Q9P242 653 aa25.45■■□□□ 1.66
LRP3-202ENST00000590275 MYH8P13535 1937 aa25.45■■□□□ 1.66
LRP3-202ENST00000590275 INHAP05111 366 aa25.44■■□□□ 1.66
LRP3-202ENST00000590275 CCL5P13501 91 aa25.44■■□□□ 1.66
LRP3-202ENST00000590275 DSG3P32926 999 aa25.44■■□□□ 1.66
LRP3-202ENST00000590275 GPR142Q7Z601 462 aa25.44■■□□□ 1.66
LRP3-202ENST00000590275 TICAM2Q86XR7 235 aa25.44■■□□□ 1.66
LRP3-202ENST00000590275 ZNF444Q8N0Y2 327 aaPredicted RBP25.44■■□□□ 1.66
LRP3-202ENST00000590275 GTF3C2Q8WUA4 911 aaPredicted RBP25.44■■□□□ 1.66
LRP3-202ENST00000590275 UNC93B1Q9H1C4 597 aa25.44■■□□□ 1.66
LRP3-202ENST00000590275 MTMR4Q9NYA4 1195 aa25.44■■□□□ 1.66
LRP3-202ENST00000590275 ANAPC4Q9UJX5 808 aa25.44■■□□□ 1.66
LRP3-202ENST00000590275 CCDC171Q6TFL3 1326 aa25.43■■□□□ 1.66
LRP3-202ENST00000590275 WDR46O15213 610 aaKnown RBP25.43■■□□□ 1.66
LRP3-202ENST00000590275 MORN1Q5T089 497 aa25.43■■□□□ 1.66
LRP3-202ENST00000590275 NEDD1Q8NHV4 660 aa25.43■■□□□ 1.66
LRP3-202ENST00000590275 PXYLP1Q8TE99 480 aa25.43■■□□□ 1.66
LRP3-202ENST00000590275 CLIP2Q9UDT6 1046 aa25.43■■□□□ 1.66
LRP3-202ENST00000590275 PLIN4Q96Q06 1357 aa25.43■■□□□ 1.66
LRP3-202ENST00000590275 RBBP6Q7Z6E9 1792 aaKnown RBP25.42■■□□□ 1.66
LRP3-202ENST00000590275 TFAP4Q01664 338 aa25.42■■□□□ 1.66
LRP3-202ENST00000590275 FAM83BQ5T0W9 1011 aa25.42■■□□□ 1.66
LRP3-202ENST00000590275 TMEM106CQ9BVX2 250 aa25.42■■□□□ 1.66
LRP3-202ENST00000590275 SH2D4AQ9H788 454 aa25.42■■□□□ 1.66
LRP3-202ENST00000590275 IL17RBQ9NRM6 502 aa25.42■■□□□ 1.66
LRP3-202ENST00000590275 KIAA0100Q14667 2235 aaKnown RBP25.41■■□□□ 1.66
LRP3-202ENST00000590275 NMT2O60551 498 aa25.41■■□□□ 1.66
LRP3-202ENST00000590275 FLOT1O75955 427 aa25.41■■□□□ 1.66
LRP3-202ENST00000590275 NDUFB10O96000 172 aa25.41■■□□□ 1.66
LRP3-202ENST00000590275 FGRP09769 529 aa25.41■■□□□ 1.66
LRP3-202ENST00000590275 CYP2B6P20813 491 aa25.41■■□□□ 1.66
LRP3-202ENST00000590275 MAPK4P31152 587 aa25.41■■□□□ 1.66
LRP3-202ENST00000590275 TTC22Q5TAA0 569 aa25.41■■□□□ 1.66
LRP3-202ENST00000590275 CWC27Q6UX04 472 aaKnown RBP25.41■■□□□ 1.66
LRP3-202ENST00000590275 PLEKHH3Q7Z736 793 aa25.41■■□□□ 1.66
LRP3-202ENST00000590275 SKAP1Q86WV1 359 aa25.41■■□□□ 1.66
LRP3-202ENST00000590275 TRIB2Q92519 343 aa25.41■■□□□ 1.66
LRP3-202ENST00000590275 MOV10L1Q9BXT6 1211 aaKnown RBP25.41■■□□□ 1.66
LRP3-202ENST00000590275 BIN2Q9UBW5 565 aaPredicted RBP25.41■■□□□ 1.66
LRP3-202ENST00000590275 A0A0G2JMZ2 1700 aa25.4■■□□□ 1.66
LRP3-202ENST00000590275 F5H6K3 240 aa25.4■■□□□ 1.66
LRP3-202ENST00000590275 PDE4BQ07343 736 aa25.4■■□□□ 1.66
LRP3-202ENST00000590275 KLRC3Q07444 240 aa25.4■■□□□ 1.66
LRP3-202ENST00000590275 CCL14Q16627 93 aa25.4■■□□□ 1.66
LRP3-202ENST00000590275 SAMD1Q6SPF0 538 aaPredicted RBP25.4■■□□□ 1.66
LRP3-202ENST00000590275 LRRC47Q8N1G4 583 aaKnown RBP25.4■■□□□ 1.66
LRP3-202ENST00000590275 MKL1Q969V6 931 aa25.4■■□□□ 1.66
LRP3-202ENST00000590275 HOXC10Q9NYD6 342 aa25.4■■□□□ 1.66
LRP3-202ENST00000590275 ADAMTS5Q9UNA0 930 aa25.4■■□□□ 1.66
LRP3-202ENST00000590275 HAND2P61296 217 aa25.39■■□□□ 1.66
LRP3-202ENST00000590275 TMEM132BQ14DG7 1078 aa25.39■■□□□ 1.66
LRP3-202ENST00000590275 RASGRP2Q7LDG7 609 aa25.39■■□□□ 1.66
LRP3-202ENST00000590275 RNF208Q9H0X6 261 aa25.39■■□□□ 1.66
LRP3-202ENST00000590275 RAD21O60216 631 aa25.38■■□□□ 1.65
LRP3-202ENST00000590275 TSPY3P0CV98 308 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms