RNA–Protein interactions for RNA: ENST00000590248.1

NEDD4L-228, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 730 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-228ENST00000590248 BTBD7Q9P203 1132 aa16.45■□□□□ 0.22
NEDD4L-228ENST00000590248 STAP2Q9UGK3 403 aa16.45■□□□□ 0.22
NEDD4L-228ENST00000590248 GREB1LQ9C091 1923 aaPredicted RBP16.45■□□□□ 0.22
NEDD4L-228ENST00000590248 PRDM1O75626 825 aa16.44■□□□□ 0.22
NEDD4L-228ENST00000590248 GJB1P08034 283 aa16.44■□□□□ 0.22
NEDD4L-228ENST00000590248 IRX6P78412 446 aaPredicted RBP16.44■□□□□ 0.22
NEDD4L-228ENST00000590248 LRRFIP1Q32MZ4 808 aaKnown RBP16.44■□□□□ 0.22
NEDD4L-228ENST00000590248 ZMYM1Q5SVZ6 1142 aa16.44■□□□□ 0.22
NEDD4L-228ENST00000590248 GIMAP6Q6P9H5 292 aa16.44■□□□□ 0.22
NEDD4L-228ENST00000590248 SAMD1Q6SPF0 538 aaPredicted RBP16.44■□□□□ 0.22
NEDD4L-228ENST00000590248 CCAR1Q8IX12 1150 aaKnown RBP16.44■□□□□ 0.22
NEDD4L-228ENST00000590248 SMC5Q8IY18 1101 aa16.44■□□□□ 0.22
NEDD4L-228ENST00000590248 TANGO6Q9C0B7 1094 aa16.44■□□□□ 0.22
NEDD4L-228ENST00000590248 MKNK2Q9HBH9 465 aa16.44■□□□□ 0.22
NEDD4L-228ENST00000590248 ARHGEF10LQ9HCE6 1279 aa16.44■□□□□ 0.22
NEDD4L-228ENST00000590248 TMX2Q9Y320 296 aa16.44■□□□□ 0.22
NEDD4L-228ENST00000590248 SPDYE16A6NNV3 312 aaPredicted RBP16.43■□□□□ 0.22
NEDD4L-228ENST00000590248 GNAT2P19087 354 aa16.43■□□□□ 0.22
NEDD4L-228ENST00000590248 RASA1P20936 1047 aa16.43■□□□□ 0.22
NEDD4L-228ENST00000590248 GJA8P48165 433 aa16.43■□□□□ 0.22
NEDD4L-228ENST00000590248 COG2Q14746 738 aa16.43■□□□□ 0.22
NEDD4L-228ENST00000590248 WDR78Q5VTH9 848 aa16.43■□□□□ 0.22
NEDD4L-228ENST00000590248 GPR142Q7Z601 462 aa16.43■□□□□ 0.22
NEDD4L-228ENST00000590248 NUDT12Q9BQG2 462 aa16.43■□□□□ 0.22
NEDD4L-228ENST00000590248 RABGAP1Q9Y3P9 1069 aa16.43■□□□□ 0.22
NEDD4L-228ENST00000590248 RAD21O60216 631 aa16.42■□□□□ 0.22
NEDD4L-228ENST00000590248 MAPK4P31152 587 aa16.42■□□□□ 0.22
NEDD4L-228ENST00000590248 AAMPQ13685 434 aa16.42■□□□□ 0.22
NEDD4L-228ENST00000590248 GTF3C2Q8WUA4 911 aaPredicted RBP16.42■□□□□ 0.22
NEDD4L-228ENST00000590248 TRIB2Q92519 343 aa16.42■□□□□ 0.22
NEDD4L-228ENST00000590248 EVI5LQ96CN4 794 aa16.42■□□□□ 0.22
NEDD4L-228ENST00000590248 DEFB118Q96PH6 123 aa16.42■□□□□ 0.22
NEDD4L-228ENST00000590248 VCPKMTQ9H867 229 aa16.42■□□□□ 0.22
NEDD4L-228ENST00000590248 KANSL2Q9H9L4 492 aa16.42■□□□□ 0.22
NEDD4L-228ENST00000590248 FOXP2O15409 715 aa16.41■□□□□ 0.22
NEDD4L-228ENST00000590248 SGPL1O95470 568 aa16.41■□□□□ 0.22
NEDD4L-228ENST00000590248 CCL14Q16627 93 aa16.41■□□□□ 0.22
NEDD4L-228ENST00000590248 VPS53Q5VIR6 699 aa16.41■□□□□ 0.22
NEDD4L-228ENST00000590248 PLEKHH3Q7Z736 793 aa16.41■□□□□ 0.22
NEDD4L-228ENST00000590248 U2AF1L4Q8WU68 220 aaKnown RBP16.41■□□□□ 0.22
NEDD4L-228ENST00000590248 CWC22Q9HCG8 908 aaKnown RBP16.41■□□□□ 0.22
NEDD4L-228ENST00000590248 INCENPQ9NQS7 918 aa16.41■□□□□ 0.22
NEDD4L-228ENST00000590248 HOXC10Q9NYD6 342 aa16.41■□□□□ 0.22
NEDD4L-228ENST00000590248 TRIM6-TRIM34B2RNG4 842 aa16.4■□□□□ 0.22
NEDD4L-228ENST00000590248 FLOT1O75955 427 aa16.4■□□□□ 0.22
NEDD4L-228ENST00000590248 DSG3P32926 999 aa16.4■□□□□ 0.22
NEDD4L-228ENST00000590248 MORN1Q5T089 497 aa16.4■□□□□ 0.22
NEDD4L-228ENST00000590248 PRPF38BQ5VTL8 546 aaKnown RBP16.4■□□□□ 0.22
NEDD4L-228ENST00000590248 LBX2Q6XYB7 198 aa16.4■□□□□ 0.22
NEDD4L-228ENST00000590248 CHD1LQ86WJ1 897 aa16.4■□□□□ 0.22
NEDD4L-228ENST00000590248 ZNF444Q8N0Y2 327 aaPredicted RBP16.4■□□□□ 0.22
NEDD4L-228ENST00000590248 LPAR1Q92633 364 aa16.4■□□□□ 0.22
NEDD4L-228ENST00000590248 USP6NLQ92738 828 aa16.4■□□□□ 0.22
NEDD4L-228ENST00000590248 RILPL2Q969X0 211 aa16.4■□□□□ 0.22
NEDD4L-228ENST00000590248 ATG4CQ96DT6 458 aa16.4■□□□□ 0.22
NEDD4L-228ENST00000590248 FAM227BQ96M60 508 aa16.4■□□□□ 0.22
NEDD4L-228ENST00000590248 NACAP1Q9BZK3 213 aa16.4■□□□□ 0.22
NEDD4L-228ENST00000590248 NAPBQ9H115 298 aa16.4■□□□□ 0.22
NEDD4L-228ENST00000590248 FBXO28Q9NVF7 368 aa16.4■□□□□ 0.22
NEDD4L-228ENST00000590248 ROBO3Q96MS0 1386 aa16.39■□□□□ 0.21
NEDD4L-228ENST00000590248 A0A0G2JMZ2 1700 aa16.39■□□□□ 0.21
NEDD4L-228ENST00000590248 TFRCP02786 760 aaKnown RBP16.39■□□□□ 0.21
NEDD4L-228ENST00000590248 HMGCRP04035 888 aa16.39■□□□□ 0.21
NEDD4L-228ENST00000590248 CCNA1P78396 465 aa16.39■□□□□ 0.21
NEDD4L-228ENST00000590248 NUCB1Q02818 461 aa16.39■□□□□ 0.21
NEDD4L-228ENST00000590248 FAM47AQ5JRC9 791 aa16.39■□□□□ 0.21
NEDD4L-228ENST00000590248 PLEKHM2Q8IWE5 1019 aa16.39■□□□□ 0.21
NEDD4L-228ENST00000590248 NKX2-3Q8TAU0 364 aa16.39■□□□□ 0.21
NEDD4L-228ENST00000590248 SOCS4Q8WXH5 440 aa16.39■□□□□ 0.21
NEDD4L-228ENST00000590248 NUP88Q99567 741 aaPredicted RBP16.39■□□□□ 0.21
NEDD4L-228ENST00000590248 MOV10L1Q9BXT6 1211 aaKnown RBP16.39■□□□□ 0.21
NEDD4L-228ENST00000590248 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.39■□□□□ 0.21
NEDD4L-228ENST00000590248 SH2D4AQ9H788 454 aa16.39■□□□□ 0.21
NEDD4L-228ENST00000590248 PAK6Q9NQU5 681 aaPredicted RBP16.39■□□□□ 0.21
NEDD4L-228ENST00000590248 A0A0D9SFI3 127 aa16.38■□□□□ 0.21
NEDD4L-228ENST00000590248 WDR46O15213 610 aaKnown RBP16.38■□□□□ 0.21
NEDD4L-228ENST00000590248 XRCC5P13010 732 aaKnown RBP16.38■□□□□ 0.21
NEDD4L-228ENST00000590248 PTPREP23469 700 aa16.38■□□□□ 0.21
NEDD4L-228ENST00000590248 CTDSPL2Q05D32 466 aa16.38■□□□□ 0.21
NEDD4L-228ENST00000590248 PPARAQ07869 468 aa16.38■□□□□ 0.21
NEDD4L-228ENST00000590248 MAP2K5Q13163 448 aa16.38■□□□□ 0.21
NEDD4L-228ENST00000590248 PLS1Q14651 629 aa16.38■□□□□ 0.21
NEDD4L-228ENST00000590248 FAM83BQ5T0W9 1011 aa16.38■□□□□ 0.21
NEDD4L-228ENST00000590248 CLIP2Q9UDT6 1046 aa16.38■□□□□ 0.21
NEDD4L-228ENST00000590248 PRKAR2AP13861 404 aaKnown RBP16.37■□□□□ 0.21
NEDD4L-228ENST00000590248 RGS2P41220 211 aa16.37■□□□□ 0.21
NEDD4L-228ENST00000590248 NMIQ13287 307 aaPredicted RBP16.37■□□□□ 0.21
NEDD4L-228ENST00000590248 CHMP4CQ96CF2 233 aa16.37■□□□□ 0.21
NEDD4L-228ENST00000590248 CEP95Q96GE4 821 aa16.37■□□□□ 0.21
NEDD4L-228ENST00000590248 SPATC1LQ9H0A9 340 aa16.37■□□□□ 0.21
NEDD4L-228ENST00000590248 GOPCQ9HD26 462 aa16.37■□□□□ 0.21
NEDD4L-228ENST00000590248 HMX1Q9NP08 348 aaPredicted RBP16.37■□□□□ 0.21
NEDD4L-228ENST00000590248 FLRT1Q9NZU1 646 aa16.37■□□□□ 0.21
NEDD4L-228ENST00000590248 TACC3Q9Y6A5 838 aa16.37■□□□□ 0.21
NEDD4L-228ENST00000590248 RPTORQ8N122 1335 aa16.37■□□□□ 0.21
NEDD4L-228ENST00000590248 IGKV6D-41A0A0C4DH26 115 aa16.36■□□□□ 0.21
NEDD4L-228ENST00000590248 F5H6K3 240 aa16.36■□□□□ 0.21
NEDD4L-228ENST00000590248 ZKSCAN1P17029 563 aaPredicted RBP16.36■□□□□ 0.21
NEDD4L-228ENST00000590248 ERCC3P19447 782 aa16.36■□□□□ 0.21
NEDD4L-228ENST00000590248 TFAP4Q01664 338 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms