RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 TICAM2Q86XR7 235 aa14.39□□□□□ -0.11
TPM4-212ENST00000590180 HOXC10Q9NYD6 342 aa14.39□□□□□ -0.11
TPM4-212ENST00000590180 A0A0D9SFI3 127 aa14.38□□□□□ -0.11
TPM4-212ENST00000590180 POTEFA5A3E0 1075 aa14.38□□□□□ -0.11
TPM4-212ENST00000590180 ERVK-9P63128 1117 aa14.38□□□□□ -0.11
TPM4-212ENST00000590180 ERVK-24P63145 666 aa14.38□□□□□ -0.11
TPM4-212ENST00000590180 KIAA1755Q5JYT7 1200 aa14.38□□□□□ -0.11
TPM4-212ENST00000590180 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.38□□□□□ -0.11
TPM4-212ENST00000590180 VCPKMTQ9H867 229 aa14.38□□□□□ -0.11
TPM4-212ENST00000590180 CLIP2Q9UDT6 1046 aa14.38□□□□□ -0.11
TPM4-212ENST00000590180 RABGAP1Q9Y3P9 1069 aa14.38□□□□□ -0.11
TPM4-212ENST00000590180 ZSWIM8A7E2V4 1837 aa14.38□□□□□ -0.11
TPM4-212ENST00000590180 ELNP15502 786 aa14.37□□□□□ -0.11
TPM4-212ENST00000590180 EN2P19622 333 aaPredicted RBP14.37□□□□□ -0.11
TPM4-212ENST00000590180 MAPK4P31152 587 aa14.37□□□□□ -0.11
TPM4-212ENST00000590180 UBXN2AP68543 259 aa14.37□□□□□ -0.11
TPM4-212ENST00000590180 CCNA1P78396 465 aa14.37□□□□□ -0.11
TPM4-212ENST00000590180 TFAP4Q01664 338 aa14.37□□□□□ -0.11
TPM4-212ENST00000590180 CTDSPL2Q05D32 466 aa14.37□□□□□ -0.11
TPM4-212ENST00000590180 MTFR1Q15390 333 aa14.37□□□□□ -0.11
TPM4-212ENST00000590180 FAM47AQ5JRC9 791 aa14.37□□□□□ -0.11
TPM4-212ENST00000590180 WDR78Q5VTH9 848 aa14.37□□□□□ -0.11
TPM4-212ENST00000590180 POTEEQ6S8J3 1075 aa14.37□□□□□ -0.11
TPM4-212ENST00000590180 SLAIN1Q8ND83 568 aa14.37□□□□□ -0.11
TPM4-212ENST00000590180 LPAR1Q92633 364 aa14.37□□□□□ -0.11
TPM4-212ENST00000590180 GOPCQ9HD26 462 aa14.37□□□□□ -0.11
TPM4-212ENST00000590180 DIAPH3Q9NSV4 1193 aa14.37□□□□□ -0.11
TPM4-212ENST00000590180 DDX60LQ5H9U9 1706 aaKnown RBP14.37□□□□□ -0.11
TPM4-212ENST00000590180 DOCK3Q8IZD9 2030 aa14.36□□□□□ -0.11
TPM4-212ENST00000590180 FLOT1O75955 427 aa14.36□□□□□ -0.11
TPM4-212ENST00000590180 TSPY3P0CV98 308 aa14.36□□□□□ -0.11
TPM4-212ENST00000590180 TSPY8P0CW00 308 aa14.36□□□□□ -0.11
TPM4-212ENST00000590180 CYP2B6P20813 491 aa14.36□□□□□ -0.11
TPM4-212ENST00000590180 PDE4AP27815 886 aa14.36□□□□□ -0.11
TPM4-212ENST00000590180 MFAP1P55081 439 aaKnown RBP14.36□□□□□ -0.11
TPM4-212ENST00000590180 IRF5Q13568 498 aa14.36□□□□□ -0.11
TPM4-212ENST00000590180 ALX1Q15699 326 aa14.36□□□□□ -0.11
TPM4-212ENST00000590180 CWC27Q6UX04 472 aaKnown RBP14.36□□□□□ -0.11
TPM4-212ENST00000590180 NUDT12Q9BQG2 462 aa14.36□□□□□ -0.11
TPM4-212ENST00000590180 PORCNQ9H237 461 aa14.36□□□□□ -0.11
TPM4-212ENST00000590180 INCENPQ9NQS7 918 aa14.36□□□□□ -0.11
TPM4-212ENST00000590180 NYAP2Q9P242 653 aa14.36□□□□□ -0.11
TPM4-212ENST00000590180 GJD2Q9UKL4 321 aa14.36□□□□□ -0.11
TPM4-212ENST00000590180 LOC285556D6RIA3 1793 aa14.36□□□□□ -0.11
TPM4-212ENST00000590180 SPDYE16A6NNV3 312 aaPredicted RBP14.35□□□□□ -0.11
TPM4-212ENST00000590180 HIP1O00291 1037 aa14.35□□□□□ -0.11
TPM4-212ENST00000590180 WDR46O15213 610 aaKnown RBP14.35□□□□□ -0.11
TPM4-212ENST00000590180 FOXP2O15409 715 aa14.35□□□□□ -0.11
TPM4-212ENST00000590180 CNMDO75829 334 aa14.35□□□□□ -0.11
TPM4-212ENST00000590180 FGAP02671 866 aa14.35□□□□□ -0.11
TPM4-212ENST00000590180 HSPD1P10809 573 aaKnown RBP14.35□□□□□ -0.11
TPM4-212ENST00000590180 DSG3P32926 999 aa14.35□□□□□ -0.11
TPM4-212ENST00000590180 PLEKHH3Q7Z736 793 aa14.35□□□□□ -0.11
TPM4-212ENST00000590180 ZNF589Q86UQ0 364 aaPredicted RBP14.35□□□□□ -0.11
TPM4-212ENST00000590180 NEDD1Q8NHV4 660 aa14.35□□□□□ -0.11
TPM4-212ENST00000590180 PXYLP1Q8TE99 480 aa14.35□□□□□ -0.11
TPM4-212ENST00000590180 RNF208Q9H0X6 261 aa14.35□□□□□ -0.11
TPM4-212ENST00000590180 TOMM22Q9NS69 142 aa14.35□□□□□ -0.11
TPM4-212ENST00000590180 BTBD7Q9P203 1132 aa14.35□□□□□ -0.11
TPM4-212ENST00000590180 CCDC171Q6TFL3 1326 aa14.35□□□□□ -0.11
TPM4-212ENST00000590180 ROBO3Q96MS0 1386 aa14.34□□□□□ -0.11
TPM4-212ENST00000590180 F5H6K3 240 aa14.34□□□□□ -0.11
TPM4-212ENST00000590180 RANBP6O60518 1105 aaKnown RBP14.34□□□□□ -0.11
TPM4-212ENST00000590180 CCL5P13501 91 aa14.34□□□□□ -0.11
TPM4-212ENST00000590180 KLRC3Q07444 240 aa14.34□□□□□ -0.11
TPM4-212ENST00000590180 PLS1Q14651 629 aa14.34□□□□□ -0.11
TPM4-212ENST00000590180 LBX2Q6XYB7 198 aa14.34□□□□□ -0.11
TPM4-212ENST00000590180 GPR142Q7Z601 462 aa14.34□□□□□ -0.11
TPM4-212ENST00000590180 CEP95Q96GE4 821 aa14.34□□□□□ -0.11
TPM4-212ENST00000590180 MTMR4Q9NYA4 1195 aa14.34□□□□□ -0.11
TPM4-212ENST00000590180 MYH8P13535 1937 aa14.33□□□□□ -0.11
TPM4-212ENST00000590180 IGKV6D-41A0A0C4DH26 115 aa14.33□□□□□ -0.12
TPM4-212ENST00000590180 TSPY2A6NKD2 308 aa14.33□□□□□ -0.12
TPM4-212ENST00000590180 TTLL1O95922 423 aa14.33□□□□□ -0.12
TPM4-212ENST00000590180 INHAP05111 366 aa14.33□□□□□ -0.12
TPM4-212ENST00000590180 HAND2P61296 217 aa14.33□□□□□ -0.12
TPM4-212ENST00000590180 RRP12Q5JTH9 1297 aaKnown RBP14.33□□□□□ -0.12
TPM4-212ENST00000590180 FAM83BQ5T0W9 1011 aa14.33□□□□□ -0.12
TPM4-212ENST00000590180 MKL1Q969V6 931 aa14.33□□□□□ -0.12
TPM4-212ENST00000590180 ATG4CQ96DT6 458 aa14.33□□□□□ -0.12
TPM4-212ENST00000590180 UNC93B1Q9H1C4 597 aa14.33□□□□□ -0.12
TPM4-212ENST00000590180 ANAPC4Q9UJX5 808 aa14.33□□□□□ -0.12
TPM4-212ENST00000590180 IVNS1ABPQ9Y6Y0 642 aa14.33□□□□□ -0.12
TPM4-212ENST00000590180 MGAMO43451 1857 aa14.32□□□□□ -0.12
TPM4-212ENST00000590180 NDUFB10O96000 172 aa14.32□□□□□ -0.12
TPM4-212ENST00000590180 TTC22Q5TAA0 569 aa14.32□□□□□ -0.12
TPM4-212ENST00000590180 MB21D1Q8N884 522 aa14.32□□□□□ -0.12
TPM4-212ENST00000590180 SOCS4Q8WXH5 440 aa14.32□□□□□ -0.12
TPM4-212ENST00000590180 CHMP4CQ96CF2 233 aa14.32□□□□□ -0.12
TPM4-212ENST00000590180 NUP88Q99567 741 aaPredicted RBP14.32□□□□□ -0.12
TPM4-212ENST00000590180 FBXO28Q9NVF7 368 aa14.32□□□□□ -0.12
TPM4-212ENST00000590180 ISY1Q9ULR0 285 aaKnown RBP14.32□□□□□ -0.12
TPM4-212ENST00000590180 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.32□□□□□ -0.12
TPM4-212ENST00000590180 GJB1P08034 283 aa14.31□□□□□ -0.12
TPM4-212ENST00000590180 PTPREP23469 700 aa14.31□□□□□ -0.12
TPM4-212ENST00000590180 RGS2P41220 211 aa14.31□□□□□ -0.12
TPM4-212ENST00000590180 PPP4R3BQ5MIZ7 849 aa14.31□□□□□ -0.12
TPM4-212ENST00000590180 SLFN13Q68D06 897 aa14.31□□□□□ -0.12
TPM4-212ENST00000590180 LRRC47Q8N1G4 583 aaKnown RBP14.31□□□□□ -0.12
TPM4-212ENST00000590180 NKX2-3Q8TAU0 364 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms