RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 RAD21O60216 631 aa25.16■■□□□ 1.62
ATG4D-212ENST00000590096 FKTNO75072 461 aa25.16■■□□□ 1.62
ATG4D-212ENST00000590096 CYP21A2P08686 494 aa25.16■■□□□ 1.62
ATG4D-212ENST00000590096 ZNF296Q8WUU4 475 aaPredicted RBP25.16■■□□□ 1.62
ATG4D-212ENST00000590096 KRT23Q9C075 422 aa25.16■■□□□ 1.62
ATG4D-212ENST00000590096 ASCC2Q9H1I8 757 aaPredicted RBP25.16■■□□□ 1.62
ATG4D-212ENST00000590096 CASP8AP2Q9UKL3 1982 aa25.16■■□□□ 1.62
ATG4D-212ENST00000590096 USP17L15C9J2P7 530 aa25.15■■□□□ 1.62
ATG4D-212ENST00000590096 USP17L13C9JLJ4 530 aa25.15■■□□□ 1.62
ATG4D-212ENST00000590096 USP17L11C9JVI0 530 aa25.15■■□□□ 1.62
ATG4D-212ENST00000590096 USP17L18D6R9N7 530 aa25.15■■□□□ 1.62
ATG4D-212ENST00000590096 USP17L22D6RA61 530 aa25.15■■□□□ 1.62
ATG4D-212ENST00000590096 USP17L17D6RBQ6 530 aa25.15■■□□□ 1.62
ATG4D-212ENST00000590096 USP17L19D6RCP7 530 aa25.15■■□□□ 1.62
ATG4D-212ENST00000590096 USP17L20D6RJB6 530 aa25.15■■□□□ 1.62
ATG4D-212ENST00000590096 USP17L24Q0WX57 530 aa25.15■■□□□ 1.62
ATG4D-212ENST00000590096 STX8Q9UNK0 236 aa25.15■■□□□ 1.62
ATG4D-212ENST00000590096 TRDNQ13061 729 aa25.14■■□□□ 1.62
ATG4D-212ENST00000590096 SPICE1Q8N0Z3 855 aa25.14■■□□□ 1.62
ATG4D-212ENST00000590096 MKL1Q969V6 931 aa25.14■■□□□ 1.62
ATG4D-212ENST00000590096 RPAP3Q9H6T3 665 aaPredicted RBP25.14■■□□□ 1.62
ATG4D-212ENST00000590096 IL17RBQ9NRM6 502 aa25.14■■□□□ 1.62
ATG4D-212ENST00000590096 CPA4Q9UI42 421 aa25.14■■□□□ 1.62
ATG4D-212ENST00000590096 ADGRA2Q96PE1 1338 aa25.13■■□□□ 1.61
ATG4D-212ENST00000590096 B4E1Z4 1266 aa25.13■■□□□ 1.61
ATG4D-212ENST00000590096 NMT2O60551 498 aa25.13■■□□□ 1.61
ATG4D-212ENST00000590096 KDM4AO75164 1064 aa25.13■■□□□ 1.61
ATG4D-212ENST00000590096 SP3Q02447 781 aa25.13■■□□□ 1.61
ATG4D-212ENST00000590096 TANGO6Q9C0B7 1094 aa25.13■■□□□ 1.61
ATG4D-212ENST00000590096 TCP11L1Q9NUJ3 509 aa25.13■■□□□ 1.61
ATG4D-212ENST00000590096 SYNPO2Q9UMS6 1093 aa25.13■■□□□ 1.61
ATG4D-212ENST00000590096 WDR46O15213 610 aaKnown RBP25.12■■□□□ 1.61
ATG4D-212ENST00000590096 KIAA1755Q5JYT7 1200 aa25.12■■□□□ 1.61
ATG4D-212ENST00000590096 C17orf99Q6UX52 265 aa25.12■■□□□ 1.61
ATG4D-212ENST00000590096 CATSPERGQ6ZRH7 1159 aa25.12■■□□□ 1.61
ATG4D-212ENST00000590096 IQCA1Q86XH1 822 aa25.12■■□□□ 1.61
ATG4D-212ENST00000590096 LRRC47Q8N1G4 583 aaKnown RBP25.12■■□□□ 1.61
ATG4D-212ENST00000590096 REC8O95072 547 aa25.11■■□□□ 1.61
ATG4D-212ENST00000590096 GCLCP48506 637 aaPredicted RBP25.11■■□□□ 1.61
ATG4D-212ENST00000590096 CCDC178Q5BJE1 867 aa25.11■■□□□ 1.61
ATG4D-212ENST00000590096 ERO1AQ96HE7 468 aa25.11■■□□□ 1.61
ATG4D-212ENST00000590096 P2RX7Q99572 595 aaKnown RBP25.11■■□□□ 1.61
ATG4D-212ENST00000590096 E7EWF7 191 aa25.1■■□□□ 1.61
ATG4D-212ENST00000590096 F5H6K3 240 aa25.1■■□□□ 1.61
ATG4D-212ENST00000590096 HERVK_113P62684 666 aa25.1■■□□□ 1.61
ATG4D-212ENST00000590096 KLRC3Q07444 240 aa25.1■■□□□ 1.61
ATG4D-212ENST00000590096 RNF20Q5VTR2 975 aa25.1■■□□□ 1.61
ATG4D-212ENST00000590096 RALYLQ86SE5 291 aaKnown RBP25.1■■□□□ 1.61
ATG4D-212ENST00000590096 GTF3C2Q8WUA4 911 aaPredicted RBP25.1■■□□□ 1.61
ATG4D-212ENST00000590096 SLC27A2O14975 620 aa25.09■■□□□ 1.61
ATG4D-212ENST00000590096 NDUFB10O96000 172 aa25.09■■□□□ 1.61
ATG4D-212ENST00000590096 BCRP11274 1271 aa25.09■■□□□ 1.61
ATG4D-212ENST00000590096 KIF22Q14807 665 aa25.09■■□□□ 1.61
ATG4D-212ENST00000590096 NECTIN1Q15223 517 aa25.09■■□□□ 1.61
ATG4D-212ENST00000590096 CREB3L3Q68CJ9 461 aa25.09■■□□□ 1.61
ATG4D-212ENST00000590096 GMCL1P1Q8NEA9 526 aa25.09■■□□□ 1.61
ATG4D-212ENST00000590096 NCOA7Q8NI08 942 aa25.09■■□□□ 1.61
ATG4D-212ENST00000590096 ANKRD13CQ8N6S4 541 aa25.08■■□□□ 1.61
ATG4D-212ENST00000590096 NKX2-3Q8TAU0 364 aa25.08■■□□□ 1.61
ATG4D-212ENST00000590096 TTC14Q96N46 770 aa25.08■■□□□ 1.61
ATG4D-212ENST00000590096 ZKSCAN3Q9BRR0 538 aa25.08■■□□□ 1.61
ATG4D-212ENST00000590096 UBAC1Q9BSL1 405 aa25.08■■□□□ 1.61
ATG4D-212ENST00000590096 ZSWIM5Q9P217 1185 aa25.08■■□□□ 1.61
ATG4D-212ENST00000590096 FLOT1O75955 427 aa25.07■■□□□ 1.6
ATG4D-212ENST00000590096 TOP1P11387 765 aaKnown RBP25.07■■□□□ 1.6
ATG4D-212ENST00000590096 NOVP48745 357 aa25.07■■□□□ 1.6
ATG4D-212ENST00000590096 COG2Q14746 738 aa25.07■■□□□ 1.6
ATG4D-212ENST00000590096 FAM110CQ1W6H9 321 aa25.07■■□□□ 1.6
ATG4D-212ENST00000590096 FAM83BQ5T0W9 1011 aa25.07■■□□□ 1.6
ATG4D-212ENST00000590096 SLFN13Q68D06 897 aa25.07■■□□□ 1.6
ATG4D-212ENST00000590096 CD99L2Q8TCZ2 262 aa25.07■■□□□ 1.6
ATG4D-212ENST00000590096 HOXC10Q9NYD6 342 aa25.07■■□□□ 1.6
ATG4D-212ENST00000590096 TAF6LQ9Y6J9 622 aa25.07■■□□□ 1.6
ATG4D-212ENST00000590096 LACTBP83111 547 aaPredicted RBP25.06■■□□□ 1.6
ATG4D-212ENST00000590096 ARHGEF6Q15052 776 aa25.06■■□□□ 1.6
ATG4D-212ENST00000590096 STOX1Q6ZVD7 989 aa25.06■■□□□ 1.6
ATG4D-212ENST00000590096 ZSCAN10Q96SZ4 725 aaPredicted RBP25.06■■□□□ 1.6
ATG4D-212ENST00000590096 ISY1Q9ULR0 285 aaKnown RBP25.06■■□□□ 1.6
ATG4D-212ENST00000590096 GTF3C3Q9Y5Q9 886 aa25.06■■□□□ 1.6
ATG4D-212ENST00000590096 SAMD1Q6SPF0 538 aaPredicted RBP25.05■■□□□ 1.6
ATG4D-212ENST00000590096 DGKHQ86XP1 1220 aa25.05■■□□□ 1.6
ATG4D-212ENST00000590096 NUP88Q99567 741 aaPredicted RBP25.05■■□□□ 1.6
ATG4D-212ENST00000590096 TMEM47Q9BQJ4 181 aa25.05■■□□□ 1.6
ATG4D-212ENST00000590096 PAGR1Q9BTK6 254 aa25.05■■□□□ 1.6
ATG4D-212ENST00000590096 SPDYE16A6NNV3 312 aaPredicted RBP25.04■■□□□ 1.6
ATG4D-212ENST00000590096 ZKSCAN1P17029 563 aaPredicted RBP25.04■■□□□ 1.6
ATG4D-212ENST00000590096 CTU1Q7Z7A3 348 aaKnown RBP25.04■■□□□ 1.6
ATG4D-212ENST00000590096 MTMR7Q9Y216 660 aa25.04■■□□□ 1.6
ATG4D-212ENST00000590096 TNKSO95271 1327 aa25.04■■□□□ 1.6
ATG4D-212ENST00000590096 MYPNQ86TC9 1320 aa25.04■■□□□ 1.6
ATG4D-212ENST00000590096 BMP3P12645 472 aa25.03■■□□□ 1.6
ATG4D-212ENST00000590096 DSG3P32926 999 aa25.03■■□□□ 1.6
ATG4D-212ENST00000590096 SLC1A4P43007 532 aa25.03■■□□□ 1.6
ATG4D-212ENST00000590096 SART3Q15020 963 aaKnown RBP25.03■■□□□ 1.6
ATG4D-212ENST00000590096 RCSD1Q6JBY9 416 aa25.03■■□□□ 1.6
ATG4D-212ENST00000590096 LBX2Q6XYB7 198 aa25.03■■□□□ 1.6
ATG4D-212ENST00000590096 CYB5R4Q7L1T6 521 aa25.03■■□□□ 1.6
ATG4D-212ENST00000590096 GPRC5AQ8NFJ5 357 aa25.03■■□□□ 1.6
ATG4D-212ENST00000590096 GMCL1Q96IK5 515 aa25.03■■□□□ 1.6
ATG4D-212ENST00000590096 MORF4L1Q9UBU8 362 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms