RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 RAD50Q92878 1312 aa20.86■□□□□ 0.93
H3F3B-207ENST00000589417 WDR46O15213 610 aaKnown RBP20.86■□□□□ 0.93
H3F3B-207ENST00000589417 FMNL1O95466 1100 aaPredicted RBP20.86■□□□□ 0.93
H3F3B-207ENST00000589417 CHMLP26374 656 aa20.86■□□□□ 0.93
H3F3B-207ENST00000589417 NOVP48745 357 aa20.86■□□□□ 0.93
H3F3B-207ENST00000589417 NT5C2P49902 561 aa20.86■□□□□ 0.93
H3F3B-207ENST00000589417 STK11IPQ8N1F8 1099 aa20.86■□□□□ 0.93
H3F3B-207ENST00000589417 ARMC5Q96C12 935 aa20.86■□□□□ 0.93
H3F3B-207ENST00000589417 TXNRD2Q9NNW7 524 aa20.86■□□□□ 0.93
H3F3B-207ENST00000589417 HOXC10Q9NYD6 342 aa20.86■□□□□ 0.93
H3F3B-207ENST00000589417 RABGAP1Q9Y3P9 1069 aa20.86■□□□□ 0.93
H3F3B-207ENST00000589417 TACC3Q9Y6A5 838 aa20.86■□□□□ 0.93
H3F3B-207ENST00000589417 GREB1LQ9C091 1923 aaPredicted RBP20.86■□□□□ 0.93
H3F3B-207ENST00000589417 TFAP4Q01664 338 aa20.85■□□□□ 0.93
H3F3B-207ENST00000589417 CTDSPL2Q05D32 466 aa20.85■□□□□ 0.93
H3F3B-207ENST00000589417 COG2Q14746 738 aa20.85■□□□□ 0.93
H3F3B-207ENST00000589417 PPP4R3BQ5MIZ7 849 aa20.85■□□□□ 0.93
H3F3B-207ENST00000589417 ERICH6BQ5W0A0 696 aa20.85■□□□□ 0.93
H3F3B-207ENST00000589417 GPRC5AQ8NFJ5 357 aa20.85■□□□□ 0.93
H3F3B-207ENST00000589417 MYPNQ86TC9 1320 aa20.84■□□□□ 0.93
H3F3B-207ENST00000589417 TTLL1O95922 423 aa20.84■□□□□ 0.93
H3F3B-207ENST00000589417 TSPY3P0CV98 308 aa20.84■□□□□ 0.93
H3F3B-207ENST00000589417 TSPY8P0CW00 308 aa20.84■□□□□ 0.93
H3F3B-207ENST00000589417 RUFY2Q8WXA3 655 aa20.84■□□□□ 0.93
H3F3B-207ENST00000589417 CEP95Q96GE4 821 aa20.84■□□□□ 0.93
H3F3B-207ENST00000589417 GOPCQ9HD26 462 aa20.84■□□□□ 0.93
H3F3B-207ENST00000589417 PTCH2Q9Y6C5 1203 aa20.84■□□□□ 0.93
H3F3B-207ENST00000589417 CCDC85CA6NKD9 419 aa20.83■□□□□ 0.93
H3F3B-207ENST00000589417 SPDYE16A6NNV3 312 aaPredicted RBP20.83■□□□□ 0.93
H3F3B-207ENST00000589417 NEFLP07196 543 aa20.83■□□□□ 0.93
H3F3B-207ENST00000589417 CENPBP07199 599 aaPredicted RBP20.83■□□□□ 0.93
H3F3B-207ENST00000589417 ERVK-9P63128 1117 aa20.83■□□□□ 0.93
H3F3B-207ENST00000589417 ERVK-24P63145 666 aa20.83■□□□□ 0.93
H3F3B-207ENST00000589417 IRF5Q13568 498 aa20.83■□□□□ 0.93
H3F3B-207ENST00000589417 Q3C1V9 767 aa20.83■□□□□ 0.93
H3F3B-207ENST00000589417 STAG1Q8WVM7 1258 aa20.83■□□□□ 0.93
H3F3B-207ENST00000589417 CCDC136Q96JN2 1154 aa20.83■□□□□ 0.93
H3F3B-207ENST00000589417 NBPF3Q9H094 633 aa20.83■□□□□ 0.93
H3F3B-207ENST00000589417 IL25Q9H293 177 aa20.83■□□□□ 0.93
H3F3B-207ENST00000589417 INCENPQ9NQS7 918 aa20.83■□□□□ 0.93
H3F3B-207ENST00000589417 TCP11L1Q9NUJ3 509 aa20.83■□□□□ 0.93
H3F3B-207ENST00000589417 CNMDO75829 334 aa20.82■□□□□ 0.92
H3F3B-207ENST00000589417 DSG3P32926 999 aa20.82■□□□□ 0.92
H3F3B-207ENST00000589417 BMP2KLQ5H9B9 411 aa20.82■□□□□ 0.92
H3F3B-207ENST00000589417 FAM47AQ5JRC9 791 aa20.82■□□□□ 0.92
H3F3B-207ENST00000589417 AKNAD1Q5T1N1 836 aa20.82■□□□□ 0.92
H3F3B-207ENST00000589417 CLIP2Q9UDT6 1046 aa20.82■□□□□ 0.92
H3F3B-207ENST00000589417 CTNNA3Q9UI47 895 aa20.82■□□□□ 0.92
H3F3B-207ENST00000589417 ADAMTS5Q9UNA0 930 aa20.82■□□□□ 0.92
H3F3B-207ENST00000589417 F5H6K3 240 aa20.81■□□□□ 0.92
H3F3B-207ENST00000589417 ZNF213O14771 459 aa20.81■□□□□ 0.92
H3F3B-207ENST00000589417 TNPO2O14787 897 aaKnown RBP20.81■□□□□ 0.92
H3F3B-207ENST00000589417 RGS19P49795 217 aa20.81■□□□□ 0.92
H3F3B-207ENST00000589417 ATP2B2Q01814 1243 aa20.81■□□□□ 0.92
H3F3B-207ENST00000589417 KLRC3Q07444 240 aa20.81■□□□□ 0.92
H3F3B-207ENST00000589417 SPICE1Q8N0Z3 855 aa20.81■□□□□ 0.92
H3F3B-207ENST00000589417 MB21D1Q8N884 522 aa20.81■□□□□ 0.92
H3F3B-207ENST00000589417 GMCL1P1Q8NEA9 526 aa20.81■□□□□ 0.92
H3F3B-207ENST00000589417 COA7Q96BR5 231 aa20.81■□□□□ 0.92
H3F3B-207ENST00000589417 RNF41Q9H4P4 317 aaPredicted RBP20.81■□□□□ 0.92
H3F3B-207ENST00000589417 IL17RBQ9NRM6 502 aa20.81■□□□□ 0.92
H3F3B-207ENST00000589417 GJD2Q9UKL4 321 aa20.81■□□□□ 0.92
H3F3B-207ENST00000589417 MYH8P13535 1937 aa20.8■□□□□ 0.92
H3F3B-207ENST00000589417 TSPY2A6NKD2 308 aa20.8■□□□□ 0.92
H3F3B-207ENST00000589417 SGSM2O43147 1006 aa20.8■□□□□ 0.92
H3F3B-207ENST00000589417 MAPK4P31152 587 aa20.8■□□□□ 0.92
H3F3B-207ENST00000589417 PRKCZQ05513 592 aa20.8■□□□□ 0.92
H3F3B-207ENST00000589417 NBPF11Q86T75 865 aa20.8■□□□□ 0.92
H3F3B-207ENST00000589417 ZNF333Q96JL9 665 aa20.8■□□□□ 0.92
H3F3B-207ENST00000589417 TANGO6Q9C0B7 1094 aa20.8■□□□□ 0.92
H3F3B-207ENST00000589417 CAPN15O75808 1086 aa20.79■□□□□ 0.92
H3F3B-207ENST00000589417 NDUFB10O96000 172 aa20.79■□□□□ 0.92
H3F3B-207ENST00000589417 FLT3LGP49771 235 aa20.79■□□□□ 0.92
H3F3B-207ENST00000589417 CCNA1P78396 465 aa20.79■□□□□ 0.92
H3F3B-207ENST00000589417 MFSD6Q6ZSS7 791 aa20.79■□□□□ 0.92
H3F3B-207ENST00000589417 TBC1D10CQ8IV04 446 aa20.79■□□□□ 0.92
H3F3B-207ENST00000589417 PXYLP1Q8TE99 480 aa20.79■□□□□ 0.92
H3F3B-207ENST00000589417 BTBD7Q9P203 1132 aa20.79■□□□□ 0.92
H3F3B-207ENST00000589417 GABRQQ9UN88 632 aa20.79■□□□□ 0.92
H3F3B-207ENST00000589417 RANBP6O60518 1105 aaKnown RBP20.78■□□□□ 0.92
H3F3B-207ENST00000589417 PEX10O60683 326 aa20.78■□□□□ 0.92
H3F3B-207ENST00000589417 FLOT1O75955 427 aa20.78■□□□□ 0.92
H3F3B-207ENST00000589417 HAND2P61296 217 aa20.78■□□□□ 0.92
H3F3B-207ENST00000589417 SLC9C1Q4G0N8 1177 aa20.78■□□□□ 0.92
H3F3B-207ENST00000589417 RAET1EQ8TD07 263 aa20.78■□□□□ 0.92
H3F3B-207ENST00000589417 IMMTQ16891 758 aaKnown RBP20.77■□□□□ 0.92
H3F3B-207ENST00000589417 SLAIN1Q8ND83 568 aa20.77■□□□□ 0.92
H3F3B-207ENST00000589417 USP6NLQ92738 828 aa20.77■□□□□ 0.92
H3F3B-207ENST00000589417 GMCL1Q96IK5 515 aa20.77■□□□□ 0.92
H3F3B-207ENST00000589417 TTC14Q96N46 770 aa20.77■□□□□ 0.92
H3F3B-207ENST00000589417 PAGR1Q9BTK6 254 aa20.77■□□□□ 0.92
H3F3B-207ENST00000589417 PORCNQ9H237 461 aa20.77■□□□□ 0.92
H3F3B-207ENST00000589417 PPP1R9AQ9ULJ8 1098 aa20.77■□□□□ 0.92
H3F3B-207ENST00000589417 ZSWIM8A7E2V4 1837 aa20.76■□□□□ 0.91
H3F3B-207ENST00000589417 GRK4P32298 578 aa20.76■□□□□ 0.91
H3F3B-207ENST00000589417 FAM83BQ5T0W9 1011 aa20.76■□□□□ 0.91
H3F3B-207ENST00000589417 SHCBP1Q8NEM2 672 aa20.76■□□□□ 0.91
H3F3B-207ENST00000589417 CENPFP49454 3210 aa20.75■□□□□ 0.91
H3F3B-207ENST00000589417 PLA2G6O60733 806 aa20.75■□□□□ 0.91
H3F3B-207ENST00000589417 ECM2O94769 699 aaPredicted RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms