RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 USP17L21D6R901 530 aa12.67□□□□□ -0.38
CLPTM1-211ENST00000589347 EVI5O60447 810 aa12.67□□□□□ -0.38
CLPTM1-211ENST00000589347 CAPN2P17655 700 aa12.67□□□□□ -0.38
CLPTM1-211ENST00000589347 VCAM1P19320 739 aa12.67□□□□□ -0.38
CLPTM1-211ENST00000589347 IRF5Q13568 498 aa12.67□□□□□ -0.38
CLPTM1-211ENST00000589347 LRIT3Q3SXY7 679 aa12.67□□□□□ -0.38
CLPTM1-211ENST00000589347 Q7L0L9 218 aa12.67□□□□□ -0.38
CLPTM1-211ENST00000589347 SLC44A5Q8NCS7 719 aa12.67□□□□□ -0.38
CLPTM1-211ENST00000589347 GPRC5AQ8NFJ5 357 aa12.67□□□□□ -0.38
CLPTM1-211ENST00000589347 SOCS4Q8WXH5 440 aa12.67□□□□□ -0.38
CLPTM1-211ENST00000589347 STRBPQ96SI9 672 aaKnown RBP12.67□□□□□ -0.38
CLPTM1-211ENST00000589347 EMILIN3Q9NT22 766 aa12.67□□□□□ -0.38
CLPTM1-211ENST00000589347 SALL3Q9BXA9 1300 aa12.66□□□□□ -0.38
CLPTM1-211ENST00000589347 M0R2C6 588 aa12.66□□□□□ -0.38
CLPTM1-211ENST00000589347 ADCY3O60266 1144 aa12.66□□□□□ -0.38
CLPTM1-211ENST00000589347 CHGBP05060 677 aa12.66□□□□□ -0.38
CLPTM1-211ENST00000589347 APPP05067 770 aa12.66□□□□□ -0.38
CLPTM1-211ENST00000589347 SLC3A2P08195 630 aaKnown RBP12.66□□□□□ -0.38
CLPTM1-211ENST00000589347 MAPK4P31152 587 aa12.66□□□□□ -0.38
CLPTM1-211ENST00000589347 CDK8P49336 464 aa12.66□□□□□ -0.38
CLPTM1-211ENST00000589347 FLT3LGP49771 235 aa12.66□□□□□ -0.38
CLPTM1-211ENST00000589347 ERVK-9P63128 1117 aa12.66□□□□□ -0.38
CLPTM1-211ENST00000589347 ERVK-24P63145 666 aa12.66□□□□□ -0.38
CLPTM1-211ENST00000589347 CCNA1P78396 465 aa12.66□□□□□ -0.38
CLPTM1-211ENST00000589347 SBK1Q52WX2 424 aa12.66□□□□□ -0.38
CLPTM1-211ENST00000589347 OTUD7AQ8TE49 926 aaPredicted RBP12.66□□□□□ -0.38
CLPTM1-211ENST00000589347 PXYLP1Q8TE99 480 aa12.66□□□□□ -0.38
CLPTM1-211ENST00000589347 LPAR1Q92633 364 aa12.66□□□□□ -0.38
CLPTM1-211ENST00000589347 OSBP2Q969R2 916 aa12.66□□□□□ -0.38
CLPTM1-211ENST00000589347 EVI5LQ96CN4 794 aa12.66□□□□□ -0.38
CLPTM1-211ENST00000589347 DYNLL2Q96FJ2 89 aa12.66□□□□□ -0.38
CLPTM1-211ENST00000589347 PAGR1Q9BTK6 254 aa12.66□□□□□ -0.38
CLPTM1-211ENST00000589347 MKNK2Q9HBH9 465 aa12.66□□□□□ -0.38
CLPTM1-211ENST00000589347 MINDY4BA8MYZ0 360 aa12.65□□□□□ -0.38
CLPTM1-211ENST00000589347 SGPL1O95470 568 aa12.65□□□□□ -0.38
CLPTM1-211ENST00000589347 AKR1B1P15121 316 aa12.65□□□□□ -0.38
CLPTM1-211ENST00000589347 GUCY1A2P33402 732 aa12.65□□□□□ -0.38
CLPTM1-211ENST00000589347 CTR9Q6PD62 1173 aa12.65□□□□□ -0.38
CLPTM1-211ENST00000589347 CATSPERGQ6ZRH7 1159 aa12.65□□□□□ -0.38
CLPTM1-211ENST00000589347 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.65□□□□□ -0.38
CLPTM1-211ENST00000589347 ACER1Q8TDN7 264 aa12.65□□□□□ -0.38
CLPTM1-211ENST00000589347 P2RX7Q99572 595 aaKnown RBP12.65□□□□□ -0.38
CLPTM1-211ENST00000589347 TANGO6Q9C0B7 1094 aa12.65□□□□□ -0.38
CLPTM1-211ENST00000589347 NAPBQ9H115 298 aa12.65□□□□□ -0.38
CLPTM1-211ENST00000589347 UNC93B1Q9H1C4 597 aa12.65□□□□□ -0.38
CLPTM1-211ENST00000589347 RPAP3Q9H6T3 665 aaPredicted RBP12.65□□□□□ -0.38
CLPTM1-211ENST00000589347 GOPCQ9HD26 462 aa12.65□□□□□ -0.38
CLPTM1-211ENST00000589347 GABRQQ9UN88 632 aa12.65□□□□□ -0.38
CLPTM1-211ENST00000589347 CYP2D7A0A087X1C5 515 aa12.64□□□□□ -0.39
CLPTM1-211ENST00000589347 GSG1L2A8MUP6 293 aa12.64□□□□□ -0.39
CLPTM1-211ENST00000589347 PDE1AP54750 535 aa12.64□□□□□ -0.39
CLPTM1-211ENST00000589347 ATP2B2Q01814 1243 aa12.64□□□□□ -0.39
CLPTM1-211ENST00000589347 EVX2Q03828 476 aa12.64□□□□□ -0.39
CLPTM1-211ENST00000589347 ZMYM1Q5SVZ6 1142 aa12.64□□□□□ -0.39
CLPTM1-211ENST00000589347 TICAM2Q86XR7 235 aa12.64□□□□□ -0.39
CLPTM1-211ENST00000589347 SMC5Q8IY18 1101 aa12.64□□□□□ -0.39
CLPTM1-211ENST00000589347 TRMT44Q8IYL2 757 aaKnown RBP12.64□□□□□ -0.39
CLPTM1-211ENST00000589347 EXOC6Q8TAG9 804 aa12.64□□□□□ -0.39
CLPTM1-211ENST00000589347 NUDT12Q9BQG2 462 aa12.64□□□□□ -0.39
CLPTM1-211ENST00000589347 LNPKQ9C0E8 428 aa12.64□□□□□ -0.39
CLPTM1-211ENST00000589347 RABGAP1Q9Y3P9 1069 aa12.64□□□□□ -0.39
CLPTM1-211ENST00000589347 TRIM6-TRIM34B2RNG4 842 aa12.63□□□□□ -0.39
CLPTM1-211ENST00000589347 PATL2C9JE40 543 aaKnown RBP12.63□□□□□ -0.39
CLPTM1-211ENST00000589347 WDR46O15213 610 aaKnown RBP12.63□□□□□ -0.39
CLPTM1-211ENST00000589347 HMGCRP04035 888 aa12.63□□□□□ -0.39
CLPTM1-211ENST00000589347 INHAP05111 366 aa12.63□□□□□ -0.39
CLPTM1-211ENST00000589347 PDE4BQ07343 736 aa12.63□□□□□ -0.39
CLPTM1-211ENST00000589347 LBX2Q6XYB7 198 aa12.63□□□□□ -0.39
CLPTM1-211ENST00000589347 VCPKMTQ9H867 229 aa12.63□□□□□ -0.39
CLPTM1-211ENST00000589347 KANSL2Q9H9L4 492 aa12.63□□□□□ -0.39
CLPTM1-211ENST00000589347 PAK6Q9NQU5 681 aaPredicted RBP12.63□□□□□ -0.39
CLPTM1-211ENST00000589347 TMX2Q9Y320 296 aa12.63□□□□□ -0.39
CLPTM1-211ENST00000589347 SPDYE16A6NNV3 312 aaPredicted RBP12.62□□□□□ -0.39
CLPTM1-211ENST00000589347 RGS2P41220 211 aa12.62□□□□□ -0.39
CLPTM1-211ENST00000589347 PPP4R3BQ5MIZ7 849 aa12.62□□□□□ -0.39
CLPTM1-211ENST00000589347 WDR78Q5VTH9 848 aa12.62□□□□□ -0.39
CLPTM1-211ENST00000589347 PLEKHH3Q7Z736 793 aa12.62□□□□□ -0.39
CLPTM1-211ENST00000589347 CHD1LQ86WJ1 897 aa12.62□□□□□ -0.39
CLPTM1-211ENST00000589347 IFNL3Q8IZI9 196 aa12.62□□□□□ -0.39
CLPTM1-211ENST00000589347 ZNF444Q8N0Y2 327 aaPredicted RBP12.62□□□□□ -0.39
CLPTM1-211ENST00000589347 MB21D1Q8N884 522 aa12.62□□□□□ -0.39
CLPTM1-211ENST00000589347 CRISPLD2Q9H0B8 497 aa12.62□□□□□ -0.39
CLPTM1-211ENST00000589347 EPB41L4AQ9HCS5 686 aaPredicted RBP12.62□□□□□ -0.39
CLPTM1-211ENST00000589347 TXNRD2Q9NNW7 524 aa12.62□□□□□ -0.39
CLPTM1-211ENST00000589347 HELLSQ9NRZ9 838 aa12.62□□□□□ -0.39
CLPTM1-211ENST00000589347 SUPT16HQ9Y5B9 1047 aaKnown RBP12.62□□□□□ -0.39
CLPTM1-211ENST00000589347 IVNS1ABPQ9Y6Y0 642 aa12.62□□□□□ -0.39
CLPTM1-211ENST00000589347 CDH23Q9H251 3354 aa12.62□□□□□ -0.39
CLPTM1-211ENST00000589347 DNAH12Q6ZR08 3092 aa12.62□□□□□ -0.39
CLPTM1-211ENST00000589347 PLIN4Q96Q06 1357 aa12.61□□□□□ -0.39
CLPTM1-211ENST00000589347 A0A1W2PRG0 241 aa12.61□□□□□ -0.39
CLPTM1-211ENST00000589347 RAD21O60216 631 aa12.61□□□□□ -0.39
CLPTM1-211ENST00000589347 FLOT1O75955 427 aa12.61□□□□□ -0.39
CLPTM1-211ENST00000589347 ELNP15502 786 aa12.61□□□□□ -0.39
CLPTM1-211ENST00000589347 MFAP1P55081 439 aaKnown RBP12.61□□□□□ -0.39
CLPTM1-211ENST00000589347 COG2Q14746 738 aa12.61□□□□□ -0.39
CLPTM1-211ENST00000589347 B4GALNT3Q6L9W6 998 aa12.61□□□□□ -0.39
CLPTM1-211ENST00000589347 GPR142Q7Z601 462 aa12.61□□□□□ -0.39
CLPTM1-211ENST00000589347 TDHQ8IZJ6 230 aa12.61□□□□□ -0.39
CLPTM1-211ENST00000589347 APBA2Q99767 749 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms