RNA–Protein interactions for RNA: ENST00000589174.1

MRPL54-202, Transcript of mitochondrial ribosomal protein L54, humanhuman

TSL 3

Gene MRPL54, Length 491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-202ENST00000589174 C20orf194Q5TEA3 1177 aa13.38□□□□□ -0.27
MRPL54-202ENST00000589174 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.38□□□□□ -0.27
MRPL54-202ENST00000589174 GTF3C2Q8WUA4 911 aaPredicted RBP13.38□□□□□ -0.27
MRPL54-202ENST00000589174 DNAJC2Q99543 621 aaKnown RBP13.38□□□□□ -0.27
MRPL54-202ENST00000589174 MCM9Q9NXL9 1143 aa13.38□□□□□ -0.27
MRPL54-202ENST00000589174 POLR3DP05423 398 aaPredicted RBP13.37□□□□□ -0.27
MRPL54-202ENST00000589174 ADD2P35612 726 aa13.37□□□□□ -0.27
MRPL54-202ENST00000589174 USP14P54578 494 aa13.37□□□□□ -0.27
MRPL54-202ENST00000589174 ERC1Q8IUD2 1116 aa13.37□□□□□ -0.27
MRPL54-202ENST00000589174 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.37□□□□□ -0.27
MRPL54-202ENST00000589174 BOLA2Q9H3K6 86 aa13.37□□□□□ -0.27
MRPL54-202ENST00000589174 EYSQ5T1H1 3165 aa13.36□□□□□ -0.27
MRPL54-202ENST00000589174 MBD4O95243 580 aa13.36□□□□□ -0.27
MRPL54-202ENST00000589174 MDM2Q00987 491 aaPredicted RBP13.36□□□□□ -0.27
MRPL54-202ENST00000589174 LRIT3Q3SXY7 679 aa13.36□□□□□ -0.27
MRPL54-202ENST00000589174 PRAMEF19Q5SWL8 479 aa13.36□□□□□ -0.27
MRPL54-202ENST00000589174 ANO1Q5XXA6 986 aa13.36□□□□□ -0.27
MRPL54-202ENST00000589174 CERS3Q8IU89 383 aa13.36□□□□□ -0.27
MRPL54-202ENST00000589174 TRMT44Q8IYL2 757 aaKnown RBP13.36□□□□□ -0.27
MRPL54-202ENST00000589174 ATG4CQ96DT6 458 aa13.36□□□□□ -0.27
MRPL54-202ENST00000589174 KIF1BPQ96EK5 621 aa13.36□□□□□ -0.27
MRPL54-202ENST00000589174 FBXO28Q9NVF7 368 aa13.36□□□□□ -0.27
MRPL54-202ENST00000589174 DDX20Q9UHI6 824 aaKnown RBP13.36□□□□□ -0.27
MRPL54-202ENST00000589174 CDH23Q9H251 3354 aa13.35□□□□□ -0.27
MRPL54-202ENST00000589174 SMARCA5O60264 1052 aaPredicted RBP13.35□□□□□ -0.27
MRPL54-202ENST00000589174 ERCC3P19447 782 aa13.35□□□□□ -0.27
MRPL54-202ENST00000589174 ADORA2AP29274 412 aa13.35□□□□□ -0.27
MRPL54-202ENST00000589174 DSG3P32926 999 aa13.35□□□□□ -0.27
MRPL54-202ENST00000589174 WDR78Q5VTH9 848 aa13.35□□□□□ -0.27
MRPL54-202ENST00000589174 TDHQ8IZJ6 230 aa13.35□□□□□ -0.27
MRPL54-202ENST00000589174 SPICE1Q8N0Z3 855 aa13.35□□□□□ -0.27
MRPL54-202ENST00000589174 CRNKL1Q9BZJ0 848 aaKnown RBP13.35□□□□□ -0.27
MRPL54-202ENST00000589174 SPATC1LQ9H0A9 340 aa13.35□□□□□ -0.27
MRPL54-202ENST00000589174 PUS7LQ9H0K6 701 aaKnown RBP13.35□□□□□ -0.27
MRPL54-202ENST00000589174 BCL11AQ9H165 835 aa13.35□□□□□ -0.27
MRPL54-202ENST00000589174 CABP5Q9NP86 173 aa13.35□□□□□ -0.27
MRPL54-202ENST00000589174 MTMR10Q9NXD2 777 aa13.35□□□□□ -0.27
MRPL54-202ENST00000589174 MPHOSPH10O00566 681 aaKnown RBP13.34□□□□□ -0.27
MRPL54-202ENST00000589174 ATP5JP18859 108 aa13.34□□□□□ -0.27
MRPL54-202ENST00000589174 CDK8P49336 464 aa13.34□□□□□ -0.27
MRPL54-202ENST00000589174 ATN1P54259 1190 aaPredicted RBP13.34□□□□□ -0.27
MRPL54-202ENST00000589174 CCNA1P78396 465 aa13.34□□□□□ -0.27
MRPL54-202ENST00000589174 COG2Q14746 738 aa13.34□□□□□ -0.27
MRPL54-202ENST00000589174 TMEM132BQ14DG7 1078 aa13.34□□□□□ -0.27
MRPL54-202ENST00000589174 TTF1Q15361 905 aaPredicted RBP13.34□□□□□ -0.27
MRPL54-202ENST00000589174 C12orf60Q5U649 245 aa13.34□□□□□ -0.27
MRPL54-202ENST00000589174 TMED8Q6PL24 325 aaPredicted RBP13.34□□□□□ -0.27
MRPL54-202ENST00000589174 RPAP2Q8IXW5 612 aaPredicted RBP13.34□□□□□ -0.27
MRPL54-202ENST00000589174 CLASRPQ8N2M8 674 aaKnown RBP13.34□□□□□ -0.27
MRPL54-202ENST00000589174 REPS2Q8NFH8 660 aa13.34□□□□□ -0.27
MRPL54-202ENST00000589174 HAUS7Q99871 368 aa13.34□□□□□ -0.27
MRPL54-202ENST00000589174 SENP6Q9GZR1 1112 aaPredicted RBP13.34□□□□□ -0.27
MRPL54-202ENST00000589174 PAG1Q9NWQ8 432 aa13.34□□□□□ -0.27
MRPL54-202ENST00000589174 ADAMTS5Q9UNA0 930 aa13.34□□□□□ -0.27
MRPL54-202ENST00000589174 TMX2Q9Y320 296 aa13.34□□□□□ -0.27
MRPL54-202ENST00000589174 MYH4Q9Y623 1939 aa13.34□□□□□ -0.27
MRPL54-202ENST00000589174 MCM3APO60318 1980 aa13.34□□□□□ -0.27
MRPL54-202ENST00000589174 USP17L12C9JPN9 530 aa13.33□□□□□ -0.28
MRPL54-202ENST00000589174 USP17L21D6R901 530 aa13.33□□□□□ -0.28
MRPL54-202ENST00000589174 GJC2Q5T442 439 aaPredicted RBP13.33□□□□□ -0.28
MRPL54-202ENST00000589174 MFSD14CQ5VZR4 134 aa13.33□□□□□ -0.28
MRPL54-202ENST00000589174 TMEM179Q6ZVK1 233 aa13.33□□□□□ -0.28
MRPL54-202ENST00000589174 DEFB123Q8N688 67 aa13.33□□□□□ -0.28
MRPL54-202ENST00000589174 LPAR1Q92633 364 aa13.33□□□□□ -0.28
MRPL54-202ENST00000589174 TANGO6Q9C0B7 1094 aa13.33□□□□□ -0.28
MRPL54-202ENST00000589174 UBE2OQ9C0C9 1292 aaKnown RBP13.33□□□□□ -0.28
MRPL54-202ENST00000589174 VCPKMTQ9H867 229 aa13.33□□□□□ -0.28
MRPL54-202ENST00000589174 UNC80Q8N2C7 3258 aa13.33□□□□□ -0.28
MRPL54-202ENST00000589174 IFIT2P09913 472 aaKnown RBP13.32□□□□□ -0.28
MRPL54-202ENST00000589174 TAL1P17542 331 aaPredicted RBP13.32□□□□□ -0.28
MRPL54-202ENST00000589174 RTP1P59025 263 aa13.32□□□□□ -0.28
MRPL54-202ENST00000589174 ATP2B2Q01814 1243 aa13.32□□□□□ -0.28
MRPL54-202ENST00000589174 HSP90AB4PQ58FF6 505 aa13.32□□□□□ -0.28
MRPL54-202ENST00000589174 OLFML2BQ68BL8 750 aa13.32□□□□□ -0.28
MRPL54-202ENST00000589174 CTR9Q6PD62 1173 aa13.32□□□□□ -0.28
MRPL54-202ENST00000589174 C16orf86Q6ZW13 317 aa13.32□□□□□ -0.28
MRPL54-202ENST00000589174 CCAR1Q8IX12 1150 aaKnown RBP13.32□□□□□ -0.28
MRPL54-202ENST00000589174 SHCBP1Q8NEM2 672 aa13.32□□□□□ -0.28
MRPL54-202ENST00000589174 DNM1LO00429 736 aa13.31□□□□□ -0.28
MRPL54-202ENST00000589174 EEF2P13639 858 aaKnown RBP13.31□□□□□ -0.28
MRPL54-202ENST00000589174 ITGB8P26012 769 aa13.31□□□□□ -0.28
MRPL54-202ENST00000589174 CNGA1P29973 690 aa13.31□□□□□ -0.28
MRPL54-202ENST00000589174 ICA1Q05084 483 aa13.31□□□□□ -0.28
MRPL54-202ENST00000589174 SNX17Q15036 470 aa13.31□□□□□ -0.28
MRPL54-202ENST00000589174 FAM47AQ5JRC9 791 aa13.31□□□□□ -0.28
MRPL54-202ENST00000589174 TSHZ3Q63HK5 1081 aa13.31□□□□□ -0.28
MRPL54-202ENST00000589174 DIEXFQ68CQ4 756 aaKnown RBP13.31□□□□□ -0.28
MRPL54-202ENST00000589174 GPR153Q6NV75 609 aa13.31□□□□□ -0.28
MRPL54-202ENST00000589174 SH3RF1Q7Z6J0 888 aa13.31□□□□□ -0.28
MRPL54-202ENST00000589174 LENG1Q96BZ8 264 aaPredicted RBP13.31□□□□□ -0.28
MRPL54-202ENST00000589174 MAML3Q96JK9 1138 aa13.31□□□□□ -0.28
MRPL54-202ENST00000589174 GUCD1Q96NT3 240 aa13.31□□□□□ -0.28
MRPL54-202ENST00000589174 EPB41L4AQ9HCS5 686 aaPredicted RBP13.31□□□□□ -0.28
MRPL54-202ENST00000589174 ATP8A2Q9NTI2 1148 aa13.31□□□□□ -0.28
MRPL54-202ENST00000589174 ZNF214Q9UL59 606 aaPredicted RBP13.31□□□□□ -0.28
MRPL54-202ENST00000589174 POTEB2H3BUK9 544 aa13.3□□□□□ -0.28
MRPL54-202ENST00000589174 RAB11FIP3O75154 756 aa13.3□□□□□ -0.28
MRPL54-202ENST00000589174 FLOT1O75955 427 aa13.3□□□□□ -0.28
MRPL54-202ENST00000589174 PGK2P07205 417 aa13.3□□□□□ -0.28
MRPL54-202ENST00000589174 IRX5P78411 483 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms