RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 USP17L12C9JPN9 530 aa8.14□□□□□ -1.11
SPIDR-228ENST00000588781 USP17L21D6R901 530 aa8.14□□□□□ -1.11
SPIDR-228ENST00000588781 ACTN4O43707 911 aaKnown RBP8.14□□□□□ -1.11
SPIDR-228ENST00000588781 LDHBP07195 334 aaKnown RBP8.14□□□□□ -1.11
SPIDR-228ENST00000588781 ADRA2BP18089 450 aa8.14□□□□□ -1.11
SPIDR-228ENST00000588781 GUCY1A2P33402 732 aa8.14□□□□□ -1.11
SPIDR-228ENST00000588781 PTGER2P43116 358 aa8.14□□□□□ -1.11
SPIDR-228ENST00000588781 DYNLL1P63167 89 aaKnown RBP8.14□□□□□ -1.11
SPIDR-228ENST00000588781 ATP2C1P98194 919 aaPredicted RBP8.14□□□□□ -1.11
SPIDR-228ENST00000588781 FUT2Q10981 343 aa8.14□□□□□ -1.11
SPIDR-228ENST00000588781 TROAPQ12815 778 aa8.14□□□□□ -1.11
SPIDR-228ENST00000588781 ORC2Q13416 577 aaPredicted RBP8.14□□□□□ -1.11
SPIDR-228ENST00000588781 STIM1Q13586 685 aa8.14□□□□□ -1.11
SPIDR-228ENST00000588781 PFKFB3Q16875 520 aaPredicted RBP8.14□□□□□ -1.11
SPIDR-228ENST00000588781 ARMCX5Q6P1M9 558 aa8.14□□□□□ -1.11
SPIDR-228ENST00000588781 ZNF444Q8N0Y2 327 aaPredicted RBP8.14□□□□□ -1.11
SPIDR-228ENST00000588781 SPATA20Q8TB22 786 aa8.14□□□□□ -1.11
SPIDR-228ENST00000588781 ERCC4Q92889 916 aaPredicted RBP8.14□□□□□ -1.11
SPIDR-228ENST00000588781 PPP1R13BQ96KQ4 1090 aa8.14□□□□□ -1.11
SPIDR-228ENST00000588781 CSRNP2Q9H175 543 aa8.14□□□□□ -1.11
SPIDR-228ENST00000588781 CUEDC2Q9H467 287 aa8.14□□□□□ -1.11
SPIDR-228ENST00000588781 DCP1AQ9NPI6 582 aaPredicted RBP8.14□□□□□ -1.11
SPIDR-228ENST00000588781 INCENPQ9NQS7 918 aa8.14□□□□□ -1.11
SPIDR-228ENST00000588781 FANCLQ9NW38 375 aa8.14□□□□□ -1.11
SPIDR-228ENST00000588781 TRMT1Q9NXH9 659 aaKnown RBP8.14□□□□□ -1.11
SPIDR-228ENST00000588781 OGFRQ9NZT2 677 aa8.14□□□□□ -1.11
SPIDR-228ENST00000588781 TAOK2Q9UL54 1235 aa8.14□□□□□ -1.11
SPIDR-228ENST00000588781 NFE2L3Q9Y4A8 694 aa8.14□□□□□ -1.11
SPIDR-228ENST00000588781 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.14□□□□□ -1.11
SPIDR-228ENST00000588781 V9GY48 417 aaPredicted RBP8.14□□□□□ -1.11
SPIDR-228ENST00000588781 CACNA1SQ13698 1873 aa8.14□□□□□ -1.11
SPIDR-228ENST00000588781 KIAA1551Q9HCM1 1747 aa8.14□□□□□ -1.11
SPIDR-228ENST00000588781 MYH6P13533 1939 aa8.13□□□□□ -1.11
SPIDR-228ENST00000588781 MYH13Q9UKX3 1938 aa8.13□□□□□ -1.11
SPIDR-228ENST00000588781 CCDC88AQ3V6T2 1871 aa8.13□□□□□ -1.11
SPIDR-228ENST00000588781 ROBO3Q96MS0 1386 aa8.13□□□□□ -1.11
SPIDR-228ENST00000588781 XDHP47989 1333 aa8.13□□□□□ -1.11
SPIDR-228ENST00000588781 SYNRGQ9UMZ2 1314 aa8.13□□□□□ -1.11
SPIDR-228ENST00000588781 AKR1B15C9JRZ8 316 aaPredicted RBP8.13□□□□□ -1.11
SPIDR-228ENST00000588781 SNAP23O00161 211 aa8.13□□□□□ -1.11
SPIDR-228ENST00000588781 GTPBP6O43824 516 aaPredicted RBP8.13□□□□□ -1.11
SPIDR-228ENST00000588781 ZNF18P17022 549 aa8.13□□□□□ -1.11
SPIDR-228ENST00000588781 ATP2B1P20020 1258 aa8.13□□□□□ -1.11
SPIDR-228ENST00000588781 ATP2B4P23634 1241 aa8.13□□□□□ -1.11
SPIDR-228ENST00000588781 SMARCA1P28370 1054 aa8.13□□□□□ -1.11
SPIDR-228ENST00000588781 PPP4CP60510 307 aa8.13□□□□□ -1.11
SPIDR-228ENST00000588781 ETF1P62495 437 aaKnown RBP8.13□□□□□ -1.11
SPIDR-228ENST00000588781 FAM193AP78312 1265 aa8.13□□□□□ -1.11
SPIDR-228ENST00000588781 NR5A1Q13285 461 aa8.13□□□□□ -1.11
SPIDR-228ENST00000588781 GRAPQ13588 217 aa8.13□□□□□ -1.11
SPIDR-228ENST00000588781 PKN1Q16512 942 aa8.13□□□□□ -1.11
SPIDR-228ENST00000588781 PPP4R3BQ5MIZ7 849 aa8.13□□□□□ -1.11
SPIDR-228ENST00000588781 TBC1D9BQ66K14 1250 aa8.13□□□□□ -1.11
SPIDR-228ENST00000588781 BICDL1Q6ZP65 573 aa8.13□□□□□ -1.11
SPIDR-228ENST00000588781 TMC4Q7Z404 712 aa8.13□□□□□ -1.11
SPIDR-228ENST00000588781 SH3RF1Q7Z6J0 888 aa8.13□□□□□ -1.11
SPIDR-228ENST00000588781 BLIDQ8IZY5 108 aa8.13□□□□□ -1.11
SPIDR-228ENST00000588781 ZNF710Q8N1W2 664 aa8.13□□□□□ -1.11
SPIDR-228ENST00000588781 CCDC82Q8N4S0 544 aa8.13□□□□□ -1.11
SPIDR-228ENST00000588781 DAGLBQ8NCG7 672 aa8.13□□□□□ -1.11
SPIDR-228ENST00000588781 MNS1Q8NEH6 495 aa8.13□□□□□ -1.11
SPIDR-228ENST00000588781 GRAPLQ8TC17 118 aaPredicted RBP8.13□□□□□ -1.11
SPIDR-228ENST00000588781 NOC3LQ8WTT2 800 aaKnown RBP8.13□□□□□ -1.11
SPIDR-228ENST00000588781 CELF1Q92879 486 aaKnown RBP8.13□□□□□ -1.11
SPIDR-228ENST00000588781 DHX58Q96C10 678 aa8.13□□□□□ -1.11
SPIDR-228ENST00000588781 PANX2Q96RD6 677 aa8.13□□□□□ -1.11
SPIDR-228ENST00000588781 BAG1Q99933 345 aaPredicted RBP8.13□□□□□ -1.11
SPIDR-228ENST00000588781 TMX1Q9H3N1 280 aa8.13□□□□□ -1.11
SPIDR-228ENST00000588781 MKNK2Q9HBH9 465 aa8.13□□□□□ -1.11
SPIDR-228ENST00000588781 MCM9Q9NXL9 1143 aa8.13□□□□□ -1.11
SPIDR-228ENST00000588781 VPS54Q9P1Q0 977 aa8.13□□□□□ -1.11
SPIDR-228ENST00000588781 TACC3Q9Y6A5 838 aa8.13□□□□□ -1.11
SPIDR-228ENST00000588781 MYH14Q7Z406 1995 aaKnown RBP8.13□□□□□ -1.11
SPIDR-228ENST00000588781 A0A087WWV3 80 aa8.12□□□□□ -1.11
SPIDR-228ENST00000588781 CCDC194A0A1B0GVG4 234 aa8.12□□□□□ -1.11
SPIDR-228ENST00000588781 hCG_1984214I3L0E3 225 aa8.12□□□□□ -1.11
SPIDR-228ENST00000588781 GNPATO15228 680 aa8.12□□□□□ -1.11
SPIDR-228ENST00000588781 PLEKHA8P1O95397 391 aa8.12□□□□□ -1.11
SPIDR-228ENST00000588781 RFC4P35249 363 aa8.12□□□□□ -1.11
SPIDR-228ENST00000588781 NCBP1Q09161 790 aaKnown RBP8.12□□□□□ -1.11
SPIDR-228ENST00000588781 TBX2Q13207 712 aaPredicted RBP8.12□□□□□ -1.11
SPIDR-228ENST00000588781 GRM4Q14833 912 aa8.12□□□□□ -1.11
SPIDR-228ENST00000588781 ARID5BQ14865 1188 aa8.12□□□□□ -1.11
SPIDR-228ENST00000588781 C12orf60Q5U649 245 aa8.12□□□□□ -1.11
SPIDR-228ENST00000588781 E4F1Q66K89 784 aaPredicted RBP8.12□□□□□ -1.11
SPIDR-228ENST00000588781 ISM2Q6H9L7 571 aa8.12□□□□□ -1.11
SPIDR-228ENST00000588781 ADGRA1Q86SQ6 560 aa8.12□□□□□ -1.11
SPIDR-228ENST00000588781 CREBRFQ8IUR6 639 aa8.12□□□□□ -1.11
SPIDR-228ENST00000588781 CNGA4Q8IV77 575 aa8.12□□□□□ -1.11
SPIDR-228ENST00000588781 PDILTQ8N807 584 aa8.12□□□□□ -1.11
SPIDR-228ENST00000588781 ZNF713Q8N859 430 aaPredicted RBP8.12□□□□□ -1.11
SPIDR-228ENST00000588781 TBC1D22AQ8WUA7 517 aa8.12□□□□□ -1.11
SPIDR-228ENST00000588781 SYMPKQ92797 1274 aaKnown RBP8.12□□□□□ -1.11
SPIDR-228ENST00000588781 PAGE5Q96GU1 130 aa8.12□□□□□ -1.11
SPIDR-228ENST00000588781 SYT17Q9BSW7 474 aa8.12□□□□□ -1.11
SPIDR-228ENST00000588781 L2HGDHQ9H9P8 463 aa8.12□□□□□ -1.11
SPIDR-228ENST00000588781 DNAI1Q9UI46 699 aa8.12□□□□□ -1.11
SPIDR-228ENST00000588781 CCNL1Q9UK58 526 aaPredicted RBP8.12□□□□□ -1.11
SPIDR-228ENST00000588781 PCDHA4Q9UN74 947 aa8.12□□□□□ -1.11
SPIDR-228ENST00000588781 COL1A1P02452 1464 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms