RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 CYP2C19P33261 490 aa22.34■■□□□ 1.17
CCDC43-204ENST00000588687 WDR78Q5VTH9 848 aa22.34■■□□□ 1.17
CCDC43-204ENST00000588687 SIRT2Q8IXJ6 389 aa22.34■■□□□ 1.17
CCDC43-204ENST00000588687 DEFB123Q8N688 67 aa22.34■■□□□ 1.17
CCDC43-204ENST00000588687 MOV10L1Q9BXT6 1211 aaKnown RBP22.34■■□□□ 1.17
CCDC43-204ENST00000588687 CWC22Q9HCG8 908 aaKnown RBP22.34■■□□□ 1.17
CCDC43-204ENST00000588687 MCM9Q9NXL9 1143 aa22.34■■□□□ 1.17
CCDC43-204ENST00000588687 GOLIM4O00461 696 aa22.33■■□□□ 1.17
CCDC43-204ENST00000588687 POLR3DP05423 398 aaPredicted RBP22.33■■□□□ 1.17
CCDC43-204ENST00000588687 SIAH1Q8IUQ4 282 aa22.33■■□□□ 1.17
CCDC43-204ENST00000588687 SLC17A8Q8NDX2 589 aa22.33■■□□□ 1.17
CCDC43-204ENST00000588687 LPAR1Q92633 364 aa22.33■■□□□ 1.17
CCDC43-204ENST00000588687 IVNS1ABPQ9Y6Y0 642 aa22.33■■□□□ 1.17
CCDC43-204ENST00000588687 COL11A1P12107 1806 aaPredicted RBP22.33■■□□□ 1.16
CCDC43-204ENST00000588687 GREB1LQ9C091 1923 aaPredicted RBP22.32■■□□□ 1.16
CCDC43-204ENST00000588687 MSCO60682 206 aa22.32■■□□□ 1.16
CCDC43-204ENST00000588687 HSP90AB4PQ58FF6 505 aa22.32■■□□□ 1.16
CCDC43-204ENST00000588687 CLEC10AQ8IUN9 316 aa22.32■■□□□ 1.16
CCDC43-204ENST00000588687 SPATC1LQ9H0A9 340 aa22.32■■□□□ 1.16
CCDC43-204ENST00000588687 MTMR10Q9NXD2 777 aa22.32■■□□□ 1.16
CCDC43-204ENST00000588687 ZBED9Q6R2W3 1325 aa22.31■■□□□ 1.16
CCDC43-204ENST00000588687 PRUNE2Q8WUY3 3088 aa22.31■■□□□ 1.16
CCDC43-204ENST00000588687 SMIM22K7EJ46 135 aa22.31■■□□□ 1.16
CCDC43-204ENST00000588687 DNM1LO00429 736 aa22.31■■□□□ 1.16
CCDC43-204ENST00000588687 ADORA2AP29274 412 aa22.31■■□□□ 1.16
CCDC43-204ENST00000588687 COG2Q14746 738 aa22.31■■□□□ 1.16
CCDC43-204ENST00000588687 SLFNL1Q499Z3 407 aa22.31■■□□□ 1.16
CCDC43-204ENST00000588687 OLFML2BQ68BL8 750 aa22.31■■□□□ 1.16
CCDC43-204ENST00000588687 TMEM179Q6ZVK1 233 aa22.31■■□□□ 1.16
CCDC43-204ENST00000588687 SHCBP1Q8NEM2 672 aa22.31■■□□□ 1.16
CCDC43-204ENST00000588687 KIF1BPQ96EK5 621 aa22.31■■□□□ 1.16
CCDC43-204ENST00000588687 DNAJC2Q99543 621 aaKnown RBP22.31■■□□□ 1.16
CCDC43-204ENST00000588687 MDM2Q00987 491 aaPredicted RBP22.3■■□□□ 1.16
CCDC43-204ENST00000588687 ATP2B2Q01814 1243 aa22.3■■□□□ 1.16
CCDC43-204ENST00000588687 CLASRPQ8N2M8 674 aaKnown RBP22.3■■□□□ 1.16
CCDC43-204ENST00000588687 DYNLL2Q96FJ2 89 aa22.3■■□□□ 1.16
CCDC43-204ENST00000588687 SENP6Q9GZR1 1112 aaPredicted RBP22.3■■□□□ 1.16
CCDC43-204ENST00000588687 ARMT1Q9H993 441 aa22.3■■□□□ 1.16
CCDC43-204ENST00000588687 SPTBN5Q9NRC6 3674 aaKnown RBP22.29■■□□□ 1.16
CCDC43-204ENST00000588687 MPHOSPH10O00566 681 aaKnown RBP22.29■■□□□ 1.16
CCDC43-204ENST00000588687 PRKAB2O43741 272 aa22.29■■□□□ 1.16
CCDC43-204ENST00000588687 COBLO75128 1261 aa22.29■■□□□ 1.16
CCDC43-204ENST00000588687 CHGBP05060 677 aa22.29■■□□□ 1.16
CCDC43-204ENST00000588687 AKR1B1P15121 316 aa22.29■■□□□ 1.16
CCDC43-204ENST00000588687 ERCC3P19447 782 aa22.29■■□□□ 1.16
CCDC43-204ENST00000588687 ADD2P35612 726 aa22.29■■□□□ 1.16
CCDC43-204ENST00000588687 TANGO6Q9C0B7 1094 aa22.29■■□□□ 1.16
CCDC43-204ENST00000588687 SWAP70Q9UH65 585 aa22.29■■□□□ 1.16
CCDC43-204ENST00000588687 STXBP5LQ9Y2K9 1186 aa22.29■■□□□ 1.16
CCDC43-204ENST00000588687 DSG3P32926 999 aa22.28■■□□□ 1.16
CCDC43-204ENST00000588687 ZBTB40Q9NUA8 1239 aa22.28■■□□□ 1.16
CCDC43-204ENST00000588687 HOXC10Q9NYD6 342 aa22.28■■□□□ 1.16
CCDC43-204ENST00000588687 TMX2Q9Y320 296 aa22.28■■□□□ 1.16
CCDC43-204ENST00000588687 APBB1O00213 710 aa22.27■■□□□ 1.16
CCDC43-204ENST00000588687 DLL1O00548 723 aa22.27■■□□□ 1.16
CCDC43-204ENST00000588687 STRNO43815 780 aa22.27■■□□□ 1.16
CCDC43-204ENST00000588687 MBD4O95243 580 aa22.27■■□□□ 1.16
CCDC43-204ENST00000588687 CNGA1P29973 690 aa22.27■■□□□ 1.16
CCDC43-204ENST00000588687 RPAP2Q8IXW5 612 aaPredicted RBP22.27■■□□□ 1.16
CCDC43-204ENST00000588687 MIER1Q8N108 512 aa22.27■■□□□ 1.16
CCDC43-204ENST00000588687 MB21D1Q8N884 522 aa22.27■■□□□ 1.16
CCDC43-204ENST00000588687 ATG4CQ96DT6 458 aa22.27■■□□□ 1.16
CCDC43-204ENST00000588687 VCPKMTQ9H867 229 aa22.27■■□□□ 1.16
CCDC43-204ENST00000588687 PAG1Q9NWQ8 432 aa22.27■■□□□ 1.16
CCDC43-204ENST00000588687 ZNFX1Q9P2E3 1918 aaKnown RBP22.27■■□□□ 1.16
CCDC43-204ENST00000588687 PLXNA1Q9UIW2 1896 aa22.26■■□□□ 1.15
CCDC43-204ENST00000588687 ATN1P54259 1190 aaPredicted RBP22.26■■□□□ 1.15
CCDC43-204ENST00000588687 ICA1Q05084 483 aa22.26■■□□□ 1.15
CCDC43-204ENST00000588687 SNX17Q15036 470 aa22.26■■□□□ 1.15
CCDC43-204ENST00000588687 ABRAQ8N0Z2 381 aa22.26■■□□□ 1.15
CCDC43-204ENST00000588687 SPICE1Q8N0Z3 855 aa22.26■■□□□ 1.15
CCDC43-204ENST00000588687 CYP2D7A0A087X1C5 515 aa22.25■■□□□ 1.15
CCDC43-204ENST00000588687 SEPT4O43236 478 aa22.25■■□□□ 1.15
CCDC43-204ENST00000588687 IFIT2P09913 472 aaKnown RBP22.25■■□□□ 1.15
CCDC43-204ENST00000588687 RTP1P59025 263 aa22.25■■□□□ 1.15
CCDC43-204ENST00000588687 GJC2Q5T442 439 aaPredicted RBP22.25■■□□□ 1.15
CCDC43-204ENST00000588687 C12orf60Q5U649 245 aa22.25■■□□□ 1.15
CCDC43-204ENST00000588687 DPP9Q86TI2 863 aa22.25■■□□□ 1.15
CCDC43-204ENST00000588687 MROH8Q9H579 483 aa22.25■■□□□ 1.15
CCDC43-204ENST00000588687 ATP8A2Q9NTI2 1148 aa22.25■■□□□ 1.15
CCDC43-204ENST00000588687 ROBO3Q96MS0 1386 aa22.25■■□□□ 1.15
CCDC43-204ENST00000588687 POTEB2H3BUK9 544 aa22.24■■□□□ 1.15
CCDC43-204ENST00000588687 FLOT1O75955 427 aa22.24■■□□□ 1.15
CCDC43-204ENST00000588687 ATP5JP18859 108 aa22.24■■□□□ 1.15
CCDC43-204ENST00000588687 ANO1Q5XXA6 986 aa22.24■■□□□ 1.15
CCDC43-204ENST00000588687 C16orf86Q6ZW13 317 aa22.24■■□□□ 1.15
CCDC43-204ENST00000588687 MAML3Q96JK9 1138 aa22.24■■□□□ 1.15
CCDC43-204ENST00000588687 HAUS7Q99871 368 aa22.24■■□□□ 1.15
CCDC43-204ENST00000588687 BOLA2Q9H3K6 86 aa22.24■■□□□ 1.15
CCDC43-204ENST00000588687 ADAMTS5Q9UNA0 930 aa22.24■■□□□ 1.15
CCDC43-204ENST00000588687 WDR46O15213 610 aaKnown RBP22.23■■□□□ 1.15
CCDC43-204ENST00000588687 RAB11FIP3O75154 756 aa22.23■■□□□ 1.15
CCDC43-204ENST00000588687 CDK8P49336 464 aa22.23■■□□□ 1.15
CCDC43-204ENST00000588687 TMEM132BQ14DG7 1078 aa22.23■■□□□ 1.15
CCDC43-204ENST00000588687 ARHGEF10LQ9HCE6 1279 aa22.23■■□□□ 1.15
CCDC43-204ENST00000588687 DDX19BQ9UMR2 479 aa22.23■■□□□ 1.15
CCDC43-204ENST00000588687 HMMRO75330 724 aa22.22■■□□□ 1.15
CCDC43-204ENST00000588687 FAM109BQ6ICB4 259 aaPredicted RBP22.22■■□□□ 1.15
CCDC43-204ENST00000588687 CCDC17Q96LX7 622 aa22.22■■□□□ 1.15
CCDC43-204ENST00000588687 GUCD1Q96NT3 240 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms