RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 BTBD18B2RXH4 712 aa16.01■□□□□ 0.15
NEDD4L-223ENST00000588516 FGRP09769 529 aa16.01■□□□□ 0.15
NEDD4L-223ENST00000588516 RXRAP19793 462 aa16.01■□□□□ 0.15
NEDD4L-223ENST00000588516 MDM2Q00987 491 aaPredicted RBP16.01■□□□□ 0.15
NEDD4L-223ENST00000588516 NCBP1Q09161 790 aaKnown RBP16.01■□□□□ 0.15
NEDD4L-223ENST00000588516 SEMA3FQ13275 785 aa16.01■□□□□ 0.15
NEDD4L-223ENST00000588516 PNOCQ13519 176 aa16.01■□□□□ 0.15
NEDD4L-223ENST00000588516 LONRF3Q496Y0 759 aa16.01■□□□□ 0.15
NEDD4L-223ENST00000588516 SLC10A5Q5PT55 438 aa16.01■□□□□ 0.15
NEDD4L-223ENST00000588516 IFIT1BQ5T764 474 aaKnown RBP16.01■□□□□ 0.15
NEDD4L-223ENST00000588516 SPTY2D1Q68D10 685 aaPredicted RBP16.01■□□□□ 0.15
NEDD4L-223ENST00000588516 METTL16Q86W50 562 aaKnown RBP16.01■□□□□ 0.15
NEDD4L-223ENST00000588516 GJB4Q9NTQ9 266 aa16.01■□□□□ 0.15
NEDD4L-223ENST00000588516 ZNF219Q9P2Y4 722 aaPredicted RBP16.01■□□□□ 0.15
NEDD4L-223ENST00000588516 IQSEC3Q9UPP2 1182 aaPredicted RBP16.01■□□□□ 0.15
NEDD4L-223ENST00000588516 COL5A3P25940 1745 aaPredicted RBP16■□□□□ 0.15
NEDD4L-223ENST00000588516 H0YIN7 160 aa16■□□□□ 0.15
NEDD4L-223ENST00000588516 ORC4O43929 436 aa16■□□□□ 0.15
NEDD4L-223ENST00000588516 DDNO94850 711 aaPredicted RBP16■□□□□ 0.15
NEDD4L-223ENST00000588516 GTF2E1P29083 439 aaPredicted RBP16■□□□□ 0.15
NEDD4L-223ENST00000588516 SARSP49591 514 aaKnown RBP16■□□□□ 0.15
NEDD4L-223ENST00000588516 RGS19P49795 217 aa16■□□□□ 0.15
NEDD4L-223ENST00000588516 FAM193AP78312 1265 aa16■□□□□ 0.15
NEDD4L-223ENST00000588516 MORC3Q14149 939 aa16■□□□□ 0.15
NEDD4L-223ENST00000588516 SEC23AQ15436 765 aa16■□□□□ 0.15
NEDD4L-223ENST00000588516 UTP14CQ5TAP6 766 aaKnown RBP16■□□□□ 0.15
NEDD4L-223ENST00000588516 ARMCX5Q6P1M9 558 aa16■□□□□ 0.15
NEDD4L-223ENST00000588516 HOMER1Q86YM7 354 aa16■□□□□ 0.15
NEDD4L-223ENST00000588516 NUP133Q8WUM0 1156 aa16■□□□□ 0.15
NEDD4L-223ENST00000588516 ERCC4Q92889 916 aaPredicted RBP16■□□□□ 0.15
NEDD4L-223ENST00000588516 PPP1R13BQ96KQ4 1090 aa16■□□□□ 0.15
NEDD4L-223ENST00000588516 CRNKL1Q9BZJ0 848 aaKnown RBP16■□□□□ 0.15
NEDD4L-223ENST00000588516 L2HGDHQ9H9P8 463 aa16■□□□□ 0.15
NEDD4L-223ENST00000588516 SEC31BQ9NQW1 1179 aa16■□□□□ 0.15
NEDD4L-223ENST00000588516 ATP8A2Q9NTI2 1148 aa16■□□□□ 0.15
NEDD4L-223ENST00000588516 TNKSO95271 1327 aa16■□□□□ 0.15
NEDD4L-223ENST00000588516 PASKQ96RG2 1323 aa16■□□□□ 0.15
NEDD4L-223ENST00000588516 MINDY4BA8MYZ0 360 aa15.99■□□□□ 0.15
NEDD4L-223ENST00000588516 STX10O60499 249 aa15.99■□□□□ 0.15
NEDD4L-223ENST00000588516 CALML3P27482 149 aa15.99■□□□□ 0.15
NEDD4L-223ENST00000588516 KIF5BP33176 963 aa15.99■□□□□ 0.15
NEDD4L-223ENST00000588516 PLCD1P51178 756 aa15.99■□□□□ 0.15
NEDD4L-223ENST00000588516 TUBB4BP68371 445 aa15.99■□□□□ 0.15
NEDD4L-223ENST00000588516 FILIP1LQ4L180 1135 aa15.99■□□□□ 0.15
NEDD4L-223ENST00000588516 LDHDQ86WU2 507 aa15.99■□□□□ 0.15
NEDD4L-223ENST00000588516 CERS3Q8IU89 383 aa15.99■□□□□ 0.15
NEDD4L-223ENST00000588516 STK11IPQ8N1F8 1099 aa15.99■□□□□ 0.15
NEDD4L-223ENST00000588516 CTCFLQ8NI51 663 aaPredicted RBP15.99■□□□□ 0.15
NEDD4L-223ENST00000588516 CLIC6Q96NY7 704 aa15.99■□□□□ 0.15
NEDD4L-223ENST00000588516 MYL10Q9BUA6 226 aa15.99■□□□□ 0.15
NEDD4L-223ENST00000588516 NAA15Q9BXJ9 866 aaKnown RBP15.99■□□□□ 0.15
NEDD4L-223ENST00000588516 TMX1Q9H3N1 280 aa15.99■□□□□ 0.15
NEDD4L-223ENST00000588516 SENP2Q9HC62 589 aa15.99■□□□□ 0.15
NEDD4L-223ENST00000588516 TRMT1Q9NXH9 659 aaKnown RBP15.99■□□□□ 0.15
NEDD4L-223ENST00000588516 MAN1B1Q9UKM7 699 aa15.99■□□□□ 0.15
NEDD4L-223ENST00000588516 DLEC1Q9Y238 1755 aa15.99■□□□□ 0.15
NEDD4L-223ENST00000588516 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.98■□□□□ 0.15
NEDD4L-223ENST00000588516 POLR2DO15514 142 aaKnown RBP15.98■□□□□ 0.15
NEDD4L-223ENST00000588516 PRKAB2O43741 272 aa15.98■□□□□ 0.15
NEDD4L-223ENST00000588516 TOB1P50616 345 aaPredicted RBP15.98■□□□□ 0.15
NEDD4L-223ENST00000588516 ETF1P62495 437 aaKnown RBP15.98■□□□□ 0.15
NEDD4L-223ENST00000588516 MAP2K1Q02750 393 aaPredicted RBP15.98■□□□□ 0.15
NEDD4L-223ENST00000588516 PDE4BQ07343 736 aa15.98■□□□□ 0.15
NEDD4L-223ENST00000588516 ARID5BQ14865 1188 aa15.98■□□□□ 0.15
NEDD4L-223ENST00000588516 E4F1Q66K89 784 aaPredicted RBP15.98■□□□□ 0.15
NEDD4L-223ENST00000588516 GSDMAQ96QA5 445 aa15.98■□□□□ 0.15
NEDD4L-223ENST00000588516 PHF20Q9BVI0 1012 aa15.98■□□□□ 0.15
NEDD4L-223ENST00000588516 ARGLU1Q9NWB6 273 aaPredicted RBP15.98■□□□□ 0.15
NEDD4L-223ENST00000588516 ABCF2Q9UG63 623 aa15.98■□□□□ 0.15
NEDD4L-223ENST00000588516 IQCA1LA6NCM1 817 aa15.97■□□□□ 0.15
NEDD4L-223ENST00000588516 SERPINB2P05120 415 aa15.97■□□□□ 0.15
NEDD4L-223ENST00000588516 SLFN14P0C7P3 912 aa15.97■□□□□ 0.15
NEDD4L-223ENST00000588516 HOXD11P31277 338 aaPredicted RBP15.97■□□□□ 0.15
NEDD4L-223ENST00000588516 GNAQP50148 359 aa15.97■□□□□ 0.15
NEDD4L-223ENST00000588516 NFIXQ14938 502 aa15.97■□□□□ 0.15
NEDD4L-223ENST00000588516 DEFB115Q30KQ5 88 aa15.97■□□□□ 0.15
NEDD4L-223ENST00000588516 SBK1Q52WX2 424 aa15.97■□□□□ 0.15
NEDD4L-223ENST00000588516 SPECC1LQ69YQ0 1117 aa15.97■□□□□ 0.15
NEDD4L-223ENST00000588516 MIGA1Q8NAN2 632 aa15.97■□□□□ 0.15
NEDD4L-223ENST00000588516 ANKRD20A12PQ8NF67 263 aa15.97■□□□□ 0.15
NEDD4L-223ENST00000588516 SPATA20Q8TB22 786 aa15.97■□□□□ 0.15
NEDD4L-223ENST00000588516 ZNF622Q969S3 477 aaKnown RBP eCLIP15.97■□□□□ 0.15
NEDD4L-223ENST00000588516 FANCLQ9NW38 375 aa15.97■□□□□ 0.15
NEDD4L-223ENST00000588516 ARPP21Q9UBL0 812 aaPredicted RBP15.97■□□□□ 0.15
NEDD4L-223ENST00000588516 KCNJ14Q9UNX9 436 aa15.97■□□□□ 0.15
NEDD4L-223ENST00000588516 FAM177BA6PVY3 158 aa15.96■□□□□ 0.15
NEDD4L-223ENST00000588516 C21orf2O43822 256 aa15.96■□□□□ 0.15
NEDD4L-223ENST00000588516 SPAG1Q07617 926 aa15.96■□□□□ 0.15
NEDD4L-223ENST00000588516 TUBB2AQ13885 445 aa15.96■□□□□ 0.15
NEDD4L-223ENST00000588516 SPATA1Q5VX52 437 aa15.96■□□□□ 0.15
NEDD4L-223ENST00000588516 FBXO33Q7Z6M2 555 aa15.96■□□□□ 0.15
NEDD4L-223ENST00000588516 AMOTL1Q8IY63 956 aa15.96■□□□□ 0.15
NEDD4L-223ENST00000588516 CCDC51Q96ER9 411 aa15.96■□□□□ 0.15
NEDD4L-223ENST00000588516 RIOK1Q9BRS2 568 aaKnown RBP15.96■□□□□ 0.15
NEDD4L-223ENST00000588516 TUBB2BQ9BVA1 445 aa15.96■□□□□ 0.15
NEDD4L-223ENST00000588516 RNF39Q9H2S5 420 aa15.96■□□□□ 0.15
NEDD4L-223ENST00000588516 CABP5Q9NP86 173 aa15.96■□□□□ 0.15
NEDD4L-223ENST00000588516 SH3GLB2Q9NR46 395 aa15.96■□□□□ 0.15
NEDD4L-223ENST00000588516 RMND1Q9NWS8 449 aa15.96■□□□□ 0.15
NEDD4L-223ENST00000588516 SERTAD1Q9UHV2 236 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms