RNA–Protein interactions for RNA: ENST00000586555.2

CIRBP-209, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-209ENST00000586555 KANSL2Q9H9L4 492 aa24.58■■□□□ 1.53
CIRBP-209ENST00000586555 EPB41L4AQ9HCS5 686 aaPredicted RBP24.58■■□□□ 1.53
CIRBP-209ENST00000586555 PCDH10Q9P2E7 1040 aa24.58■■□□□ 1.53
CIRBP-209ENST00000586555 ROBO3Q96MS0 1386 aa24.57■■□□□ 1.52
CIRBP-209ENST00000586555 PLXNB2O15031 1838 aa24.57■■□□□ 1.52
CIRBP-209ENST00000586555 CAPN2P17655 700 aa24.57■■□□□ 1.52
CIRBP-209ENST00000586555 MFAP1P55081 439 aaKnown RBP24.57■■□□□ 1.52
CIRBP-209ENST00000586555 ICA1Q05084 483 aa24.57■■□□□ 1.52
CIRBP-209ENST00000586555 PDE4BQ07343 736 aa24.57■■□□□ 1.52
CIRBP-209ENST00000586555 ZNF444Q8N0Y2 327 aaPredicted RBP24.57■■□□□ 1.52
CIRBP-209ENST00000586555 HIP1O00291 1037 aa24.56■■□□□ 1.52
CIRBP-209ENST00000586555 HERVK_113P62684 666 aa24.56■■□□□ 1.52
CIRBP-209ENST00000586555 PAK6Q9NQU5 681 aaPredicted RBP24.56■■□□□ 1.52
CIRBP-209ENST00000586555 SMIM22K7EJ46 135 aa24.55■■□□□ 1.52
CIRBP-209ENST00000586555 VCAM1P19320 739 aa24.55■■□□□ 1.52
CIRBP-209ENST00000586555 CCDC129Q6ZRS4 1044 aa24.55■■□□□ 1.52
CIRBP-209ENST00000586555 STK11IPQ8N1F8 1099 aa24.55■■□□□ 1.52
CIRBP-209ENST00000586555 TRIOBPQ9H2D6 2365 aa24.55■■□□□ 1.52
CIRBP-209ENST00000586555 H0YGN5 161 aa24.54■■□□□ 1.52
CIRBP-209ENST00000586555 SDSP20132 328 aa24.54■■□□□ 1.52
CIRBP-209ENST00000586555 CATSPERGQ6ZRH7 1159 aa24.54■■□□□ 1.52
CIRBP-209ENST00000586555 GPRC5AQ8NFJ5 357 aa24.54■■□□□ 1.52
CIRBP-209ENST00000586555 LPAR1Q92633 364 aa24.54■■□□□ 1.52
CIRBP-209ENST00000586555 TXNRD2Q9NNW7 524 aa24.54■■□□□ 1.52
CIRBP-209ENST00000586555 RBPJLQ9UBG7 517 aa24.54■■□□□ 1.52
CIRBP-209ENST00000586555 TMX2Q9Y320 296 aa24.54■■□□□ 1.52
CIRBP-209ENST00000586555 A0A1W2PRG0 241 aa24.53■■□□□ 1.52
CIRBP-209ENST00000586555 RASA1P20936 1047 aa24.53■■□□□ 1.52
CIRBP-209ENST00000586555 ATP2B2Q01814 1243 aa24.53■■□□□ 1.52
CIRBP-209ENST00000586555 PPARAQ07869 468 aa24.53■■□□□ 1.52
CIRBP-209ENST00000586555 NMIQ13287 307 aaPredicted RBP24.53■■□□□ 1.52
CIRBP-209ENST00000586555 POTEEQ6S8J3 1075 aa24.53■■□□□ 1.52
CIRBP-209ENST00000586555 CCAR1Q8IX12 1150 aaKnown RBP24.53■■□□□ 1.52
CIRBP-209ENST00000586555 FAM227BQ96M60 508 aa24.53■■□□□ 1.52
CIRBP-209ENST00000586555 RPAP3Q9H6T3 665 aaPredicted RBP24.53■■□□□ 1.52
CIRBP-209ENST00000586555 DIAPH3Q9NSV4 1193 aa24.53■■□□□ 1.52
CIRBP-209ENST00000586555 A0A0D9SFI3 127 aa24.52■■□□□ 1.52
CIRBP-209ENST00000586555 PEX10O60683 326 aa24.52■■□□□ 1.52
CIRBP-209ENST00000586555 EEF2P13639 858 aaKnown RBP24.52■■□□□ 1.52
CIRBP-209ENST00000586555 CRISPLD2Q9H0B8 497 aa24.52■■□□□ 1.52
CIRBP-209ENST00000586555 GOPCQ9HD26 462 aa24.52■■□□□ 1.52
CIRBP-209ENST00000586555 HOXC10Q9NYD6 342 aa24.52■■□□□ 1.52
CIRBP-209ENST00000586555 COLQQ9Y215 455 aaPredicted RBP24.52■■□□□ 1.52
CIRBP-209ENST00000586555 ALX1Q15699 326 aa24.51■■□□□ 1.51
CIRBP-209ENST00000586555 Q3C1V9 767 aa24.51■■□□□ 1.51
CIRBP-209ENST00000586555 DEFB118Q96PH6 123 aa24.51■■□□□ 1.51
CIRBP-209ENST00000586555 HTATIP2Q9BUP3 242 aa24.51■■□□□ 1.51
CIRBP-209ENST00000586555 VCPKMTQ9H867 229 aa24.51■■□□□ 1.51
CIRBP-209ENST00000586555 FARP2O94887 1054 aaPredicted RBP24.5■■□□□ 1.51
CIRBP-209ENST00000586555 HMGCRP04035 888 aa24.5■■□□□ 1.51
CIRBP-209ENST00000586555 COG2Q14746 738 aa24.5■■□□□ 1.51
CIRBP-209ENST00000586555 SIAH1Q8IUQ4 282 aa24.5■■□□□ 1.51
CIRBP-209ENST00000586555 DPF3Q92784 378 aa24.5■■□□□ 1.51
CIRBP-209ENST00000586555 PAGR1Q9BTK6 254 aa24.5■■□□□ 1.51
CIRBP-209ENST00000586555 TANGO6Q9C0B7 1094 aa24.5■■□□□ 1.51
CIRBP-209ENST00000586555 RABGAP1Q9Y3P9 1069 aa24.5■■□□□ 1.51
CIRBP-209ENST00000586555 CCDC171Q6TFL3 1326 aa24.5■■□□□ 1.51
CIRBP-209ENST00000586555 TSPY3P0CV98 308 aa24.49■■□□□ 1.51
CIRBP-209ENST00000586555 TSPY8P0CW00 308 aa24.49■■□□□ 1.51
CIRBP-209ENST00000586555 ERVK-9P63128 1117 aa24.49■■□□□ 1.51
CIRBP-209ENST00000586555 ERVK-24P63145 666 aa24.49■■□□□ 1.51
CIRBP-209ENST00000586555 CCNA1P78396 465 aa24.49■■□□□ 1.51
CIRBP-209ENST00000586555 CLEC10AQ8IUN9 316 aa24.49■■□□□ 1.51
CIRBP-209ENST00000586555 NYAP2Q9P242 653 aa24.49■■□□□ 1.51
CIRBP-209ENST00000586555 PRDM1O75626 825 aa24.48■■□□□ 1.51
CIRBP-209ENST00000586555 TFRCP02786 760 aaKnown RBP24.48■■□□□ 1.51
CIRBP-209ENST00000586555 PDE4AP27815 886 aa24.48■■□□□ 1.51
CIRBP-209ENST00000586555 MAPK4P31152 587 aa24.48■■□□□ 1.51
CIRBP-209ENST00000586555 PPP4R3BQ5MIZ7 849 aa24.48■■□□□ 1.51
CIRBP-209ENST00000586555 TTC22Q5TAA0 569 aa24.48■■□□□ 1.51
CIRBP-209ENST00000586555 VPS53Q5VIR6 699 aa24.48■■□□□ 1.51
CIRBP-209ENST00000586555 LBX2Q6XYB7 198 aa24.48■■□□□ 1.51
CIRBP-209ENST00000586555 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.48■■□□□ 1.512e-30■□□□□ 10.2
CIRBP-209ENST00000586555 CWC22Q9HCG8 908 aaKnown RBP24.48■■□□□ 1.51
CIRBP-209ENST00000586555 WDR46O15213 610 aaKnown RBP24.47■■□□□ 1.51
CIRBP-209ENST00000586555 RAD21O60216 631 aa24.47■■□□□ 1.51
CIRBP-209ENST00000586555 HSPD1P10809 573 aaKnown RBP24.47■■□□□ 1.51
CIRBP-209ENST00000586555 XRCC5P13010 732 aaKnown RBP24.47■■□□□ 1.51
CIRBP-209ENST00000586555 TRIM32Q13049 653 aa24.47■■□□□ 1.51
CIRBP-209ENST00000586555 CWC27Q6UX04 472 aaKnown RBP24.47■■□□□ 1.51
CIRBP-209ENST00000586555 USP6NLQ92738 828 aa24.47■■□□□ 1.51
CIRBP-209ENST00000586555 NUDT12Q9BQG2 462 aa24.47■■□□□ 1.51
CIRBP-209ENST00000586555 ANAPC4Q9UJX5 808 aa24.47■■□□□ 1.51
CIRBP-209ENST00000586555 ZMYM6O95789 1325 aa24.46■■□□□ 1.51
CIRBP-209ENST00000586555 RPTORQ8N122 1335 aa24.46■■□□□ 1.51
CIRBP-209ENST00000586555 FOXP2O15409 715 aa24.46■■□□□ 1.51
CIRBP-209ENST00000586555 FGAP02671 866 aa24.46■■□□□ 1.51
CIRBP-209ENST00000586555 FXR1P51114 621 aaKnown RBP eCLIP24.46■■□□□ 1.51
CIRBP-209ENST00000586555 SPICE1Q8N0Z3 855 aa24.46■■□□□ 1.51
CIRBP-209ENST00000586555 TRIB2Q92519 343 aa24.46■■□□□ 1.51
CIRBP-209ENST00000586555 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.46■■□□□ 1.51
CIRBP-209ENST00000586555 PORCNQ9H237 461 aa24.46■■□□□ 1.51
CIRBP-209ENST00000586555 RANBP2P49792 3224 aaKnown RBP24.45■■□□□ 1.5
CIRBP-209ENST00000586555 CNMDO75829 334 aa24.45■■□□□ 1.5
CIRBP-209ENST00000586555 CYP2B6P20813 491 aa24.45■■□□□ 1.5
CIRBP-209ENST00000586555 TFAP4Q01664 338 aa24.45■■□□□ 1.5
CIRBP-209ENST00000586555 CTDSPL2Q05D32 466 aa24.45■■□□□ 1.5
CIRBP-209ENST00000586555 ZNF589Q86UQ0 364 aaPredicted RBP24.45■■□□□ 1.5
CIRBP-209ENST00000586555 NEDD1Q8NHV4 660 aa24.45■■□□□ 1.5
CIRBP-209ENST00000586555 SOCS4Q8WXH5 440 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms