RNA–Protein interactions for RNA: ENST00000585685.5

APOC4-APOC2-201, Transcript of APOC4-APOC2 readthrough (NMD candidate), humanhuman

TSL 5

Gene APOC4-APOC2, Length 1,829 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-APOC2-201ENST00000585685 MEX3CQ5U5Q3 659 aaKnown RBP18.85■□□□□ 0.61
APOC4-APOC2-201ENST00000585685 SEPT12Q8IYM1 358 aa18.85■□□□□ 0.61
APOC4-APOC2-201ENST00000585685 CCDC34Q96HJ3 373 aa18.85■□□□□ 0.61
APOC4-APOC2-201ENST00000585685 MAP7D2Q96T17 732 aa18.85■□□□□ 0.61
APOC4-APOC2-201ENST00000585685 RTFDC1Q9BY42 306 aaPredicted RBP18.85■□□□□ 0.61
APOC4-APOC2-201ENST00000585685 PDCL3Q9H2J4 239 aa18.85■□□□□ 0.61
APOC4-APOC2-201ENST00000585685 IL1R1P14778 569 aa18.84■□□□□ 0.61
APOC4-APOC2-201ENST00000585685 ATP2C1P98194 919 aaPredicted RBP18.84■□□□□ 0.61
APOC4-APOC2-201ENST00000585685 DIXDC1Q155Q3 683 aa18.84■□□□□ 0.61
APOC4-APOC2-201ENST00000585685 ARMCX5Q6P1M9 558 aa18.84■□□□□ 0.61
APOC4-APOC2-201ENST00000585685 RBM17Q96I25 401 aaKnown RBP18.84■□□□□ 0.61
APOC4-APOC2-201ENST00000585685 CD209Q9NNX6 404 aa18.84■□□□□ 0.61
APOC4-APOC2-201ENST00000585685 SH3GLB2Q9NR46 395 aa18.84■□□□□ 0.61
APOC4-APOC2-201ENST00000585685 TRPC5Q9UL62 973 aaPredicted RBP18.84■□□□□ 0.61
APOC4-APOC2-201ENST00000585685 WNT7AO00755 349 aa18.84■□□□□ 0.61
APOC4-APOC2-201ENST00000585685 RIOK3O14730 519 aaKnown RBP18.84■□□□□ 0.61
APOC4-APOC2-201ENST00000585685 SERPINB2P05120 415 aa18.84■□□□□ 0.61
APOC4-APOC2-201ENST00000585685 KCNJ6P48051 423 aa18.84■□□□□ 0.61
APOC4-APOC2-201ENST00000585685 UBASH3AP57075 661 aa18.84■□□□□ 0.61
APOC4-APOC2-201ENST00000585685 NLRP5P59047 1200 aa18.84■□□□□ 0.61
APOC4-APOC2-201ENST00000585685 RBM10P98175 930 aaKnown RBP18.84■□□□□ 0.61
APOC4-APOC2-201ENST00000585685 GRM4Q14833 912 aa18.84■□□□□ 0.61
APOC4-APOC2-201ENST00000585685 MTERF4Q7Z6M4 381 aaKnown RBP18.84■□□□□ 0.61
APOC4-APOC2-201ENST00000585685 PDILTQ8N807 584 aa18.84■□□□□ 0.61
APOC4-APOC2-201ENST00000585685 PNMA1Q8ND90 353 aa18.84■□□□□ 0.61
APOC4-APOC2-201ENST00000585685 SLC27A3Q5K4L6 730 aa18.83■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 NYAP1Q6ZVC0 841 aa18.83■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 SH3RF1Q7Z6J0 888 aa18.83■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 ENOX1Q8TC92 643 aaKnown RBP18.83■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 DYNLL2Q96FJ2 89 aa18.83■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 GPR101Q96P66 508 aaPredicted RBP18.83■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 MKNK2Q9HBH9 465 aa18.83■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 FANCLQ9NW38 375 aa18.83■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 PODXL2Q9NZ53 605 aa18.83■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 PAXBP1Q9Y5B6 917 aa18.83■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 UFL1O94874 794 aa18.82■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 SERPINC1P01008 464 aa18.82■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 SLFN14P0C7P3 912 aa18.82■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 SFPQP23246 707 aaKnown RBP eCLIP18.82■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 CALML3P27482 149 aa18.82■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 GNAQP50148 359 aa18.82■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 ZNF174Q15697 407 aa18.82■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 NOM1Q5C9Z4 860 aaKnown RBP18.82■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 CT47A1Q5JQC4 288 aaPredicted RBP18.82■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 CCAR2Q8N163 923 aaKnown RBP18.82■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 TGFBRAP1Q8WUH2 860 aa18.82■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 SYMPKQ92797 1274 aaKnown RBP18.82■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 EPSTI1Q96J88 318 aa18.82■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 GGA1Q9UJY5 639 aa18.82■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 A0A087X0B3 334 aa18.81■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 GPR75-ASB3A0A0A6YYF3 556 aa18.81■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 USP27XA6NNY8 438 aa18.81■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 BBOX1O75936 387 aa18.81■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 HOXA10P31260 410 aaPredicted RBP18.81■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 SLC4A8Q2Y0W8 1093 aa18.81■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 DPF2Q92785 391 aa18.81■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 DHX58Q96C10 678 aa18.81■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 CTIFO43310 598 aaKnown RBP18.81■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 TSPY3P0CV98 308 aa18.81■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 TSPY8P0CW00 308 aa18.81■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 BTDP43251 543 aa18.81■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 PTGDRQ13258 359 aa18.81■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 PIK3AP1Q6ZUJ8 805 aa18.81■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 GRAMD1CQ8IYS0 662 aa18.81■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 ZNF444Q8N0Y2 327 aaPredicted RBP18.81■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 ZNF287Q9HBT7 754 aa18.81■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 MAD2L2Q9UI95 211 aa18.81■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 BRWD3Q6RI45 1802 aa18.8■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 NRDCO43847 1150 aa18.8■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 VEGFAP15692 232 aaPredicted RBP18.8■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 ZNF18P17022 549 aa18.8■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 ERCC5P28715 1186 aaPredicted RBP18.8■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 PLCD1P51178 756 aa18.8■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 CFAP100Q494V2 611 aa18.8■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 VSTM4Q8IW00 320 aa18.8■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 FAM163AQ96GL9 167 aaPredicted RBP18.8■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 USP17L3A6NCW0 530 aa18.79■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 USP17L4A6NCW7 530 aa18.79■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 PLCG2P16885 1265 aa18.79■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 RASA1P20936 1047 aa18.79■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 FMR1Q06787 632 aaKnown RBP eCLIP18.79■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 PTPN14Q15678 1187 aa18.79■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 CEP135Q66GS9 1140 aa18.79■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 USP17L1Q7RTZ2 530 aa18.79■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 MAPKAPK5Q8IW41 473 aa18.79■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 BLIDQ8IZY5 108 aa18.79■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 FAM177A1Q8N128 213 aaPredicted RBP18.79■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 STAG2Q8N3U4 1231 aa18.79■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 PAGE5Q96GU1 130 aa18.79■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 PYM1Q9BRP8 204 aaKnown RBP18.79■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 PCDHA4Q9UN74 947 aa18.79■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 SNED1Q8TER0 1413 aa18.79■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 ANKRD31Q8N7Z5 1873 aa18.79■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 KLRG2A4D1S0 409 aaPredicted RBP18.79■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 PSDA5PKW4 1024 aaPredicted RBP18.79■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 ARL6IP4Q66PJ3 421 aaKnown RBP18.79■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 TBC1D22AQ8WUA7 517 aa18.79■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 CRAMP1Q96RY5 1269 aa18.79■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 NFE2L3Q9Y4A8 694 aa18.79■□□□□ 0.6
APOC4-APOC2-201ENST00000585685 VWA3AA6NCI4 1184 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms