RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 SEC62Q99442 399 aaKnown RBP14.77□□□□□ -0.04
SS18-225ENST00000585121 NAPBQ9H115 298 aa14.77□□□□□ -0.04
SS18-225ENST00000585121 GOPCQ9HD26 462 aa14.77□□□□□ -0.04
SS18-225ENST00000585121 GJD2Q9UKL4 321 aa14.77□□□□□ -0.04
SS18-225ENST00000585121 SMIM22K7EJ46 135 aa14.76□□□□□ -0.05
SS18-225ENST00000585121 CAPN2P17655 700 aa14.76□□□□□ -0.05
SS18-225ENST00000585121 Q3C1V9 767 aa14.76□□□□□ -0.05
SS18-225ENST00000585121 CHD1LQ86WJ1 897 aa14.76□□□□□ -0.05
SS18-225ENST00000585121 TICAM2Q86XR7 235 aa14.76□□□□□ -0.05
SS18-225ENST00000585121 TRMT44Q8IYL2 757 aaKnown RBP14.76□□□□□ -0.05
SS18-225ENST00000585121 VCPKMTQ9H867 229 aa14.76□□□□□ -0.05
SS18-225ENST00000585121 EPB41L4AQ9HCS5 686 aaPredicted RBP14.76□□□□□ -0.05
SS18-225ENST00000585121 SPDYE16A6NNV3 312 aaPredicted RBP14.76□□□□□ -0.05
SS18-225ENST00000585121 TRIM6-TRIM34B2RNG4 842 aa14.76□□□□□ -0.05
SS18-225ENST00000585121 RAD21O60216 631 aa14.76□□□□□ -0.05
SS18-225ENST00000585121 PEX10O60683 326 aa14.76□□□□□ -0.05
SS18-225ENST00000585121 HMGCRP04035 888 aa14.76□□□□□ -0.05
SS18-225ENST00000585121 EEF2P13639 858 aaKnown RBP14.76□□□□□ -0.05
SS18-225ENST00000585121 PDE4BQ07343 736 aa14.76□□□□□ -0.05
SS18-225ENST00000585121 WDR78Q5VTH9 848 aa14.76□□□□□ -0.05
SS18-225ENST00000585121 GPR142Q7Z601 462 aa14.76□□□□□ -0.05
SS18-225ENST00000585121 MB21D1Q8N884 522 aa14.76□□□□□ -0.05
SS18-225ENST00000585121 UNC93B1Q9H1C4 597 aa14.76□□□□□ -0.05
SS18-225ENST00000585121 PORCNQ9H237 461 aa14.76□□□□□ -0.05
SS18-225ENST00000585121 HELLSQ9NRZ9 838 aa14.76□□□□□ -0.05
SS18-225ENST00000585121 IVNS1ABPQ9Y6Y0 642 aa14.76□□□□□ -0.05
SS18-225ENST00000585121 BAZ2AQ9UIF9 1905 aaKnown RBP14.75□□□□□ -0.05
SS18-225ENST00000585121 WDR46O15213 610 aaKnown RBP14.75□□□□□ -0.05
SS18-225ENST00000585121 FLOT1O75955 427 aa14.75□□□□□ -0.05
SS18-225ENST00000585121 IGHDP01880 384 aa14.75□□□□□ -0.05
SS18-225ENST00000585121 CYP2B6P20813 491 aa14.75□□□□□ -0.05
SS18-225ENST00000585121 RASA1P20936 1047 aa14.75□□□□□ -0.05
SS18-225ENST00000585121 RGS2P41220 211 aa14.75□□□□□ -0.05
SS18-225ENST00000585121 GJA8P48165 433 aa14.75□□□□□ -0.05
SS18-225ENST00000585121 NUCB1Q02818 461 aa14.75□□□□□ -0.05
SS18-225ENST00000585121 PRPF38BQ5VTL8 546 aaKnown RBP14.75□□□□□ -0.05
SS18-225ENST00000585121 CLEC10AQ8IUN9 316 aa14.75□□□□□ -0.05
SS18-225ENST00000585121 SIAH1Q8IUQ4 282 aa14.75□□□□□ -0.05
SS18-225ENST00000585121 SPICE1Q8N0Z3 855 aa14.75□□□□□ -0.05
SS18-225ENST00000585121 MGAMO43451 1857 aa14.75□□□□□ -0.05
SS18-225ENST00000585121 ROBO3Q96MS0 1386 aa14.75□□□□□ -0.05
SS18-225ENST00000585121 TNRC18O15417 2968 aaPredicted RBP14.74□□□□□ -0.05
SS18-225ENST00000585121 CNMDO75829 334 aa14.74□□□□□ -0.05
SS18-225ENST00000585121 XRCC5P13010 732 aaKnown RBP14.74□□□□□ -0.05
SS18-225ENST00000585121 SAMD1Q6SPF0 538 aaPredicted RBP14.74□□□□□ -0.05
SS18-225ENST00000585121 RILPL2Q969X0 211 aa14.74□□□□□ -0.05
SS18-225ENST00000585121 TFRCP02786 760 aaKnown RBP14.73□□□□□ -0.05
SS18-225ENST00000585121 DSG3P32926 999 aa14.73□□□□□ -0.05
SS18-225ENST00000585121 PPARAQ07869 468 aa14.73□□□□□ -0.05
SS18-225ENST00000585121 U2AF1L4Q8WU68 220 aaKnown RBP14.73□□□□□ -0.05
SS18-225ENST00000585121 BTBD7Q9P203 1132 aa14.73□□□□□ -0.05
SS18-225ENST00000585121 NYAP2Q9P242 653 aa14.73□□□□□ -0.05
SS18-225ENST00000585121 SLC15A5A6NIM6 579 aa14.72□□□□□ -0.05
SS18-225ENST00000585121 PRDM1O75626 825 aa14.72□□□□□ -0.05
SS18-225ENST00000585121 SGPL1O95470 568 aa14.72□□□□□ -0.05
SS18-225ENST00000585121 TSPY3P0CV98 308 aa14.72□□□□□ -0.05
SS18-225ENST00000585121 TSPY8P0CW00 308 aa14.72□□□□□ -0.05
SS18-225ENST00000585121 ZKSCAN1P17029 563 aaPredicted RBP14.72□□□□□ -0.05
SS18-225ENST00000585121 MAP2K5Q13163 448 aa14.72□□□□□ -0.05
SS18-225ENST00000585121 MCMDC2Q4G0Z9 681 aa14.72□□□□□ -0.05
SS18-225ENST00000585121 KIAA1755Q5JYT7 1200 aa14.72□□□□□ -0.05
SS18-225ENST00000585121 PPP4R3BQ5MIZ7 849 aa14.72□□□□□ -0.05
SS18-225ENST00000585121 MORN1Q5T089 497 aa14.72□□□□□ -0.05
SS18-225ENST00000585121 POTEEQ6S8J3 1075 aa14.72□□□□□ -0.05
SS18-225ENST00000585121 CCDC129Q6ZRS4 1044 aa14.72□□□□□ -0.05
SS18-225ENST00000585121 DEFB118Q96PH6 123 aa14.72□□□□□ -0.05
SS18-225ENST00000585121 HMX1Q9NP08 348 aaPredicted RBP14.72□□□□□ -0.05
SS18-225ENST00000585121 CLIP2Q9UDT6 1046 aa14.72□□□□□ -0.05
SS18-225ENST00000585121 BRCA2P51587 3418 aa14.72□□□□□ -0.05
SS18-225ENST00000585121 PTPREP23469 700 aa14.71□□□□□ -0.05
SS18-225ENST00000585121 MFAP1P55081 439 aaKnown RBP14.71□□□□□ -0.05
SS18-225ENST00000585121 PLS1Q14651 629 aa14.71□□□□□ -0.05
SS18-225ENST00000585121 PLEKHM2Q8IWE5 1019 aa14.71□□□□□ -0.05
SS18-225ENST00000585121 APBA2Q99767 749 aa14.71□□□□□ -0.05
SS18-225ENST00000585121 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.71□□□□□ -0.05
SS18-225ENST00000585121 SPATC1LQ9H0A9 340 aa14.71□□□□□ -0.05
SS18-225ENST00000585121 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.71□□□□□ -0.05
SS18-225ENST00000585121 OSBPL3Q9H4L5 887 aa14.71□□□□□ -0.05
SS18-225ENST00000585121 RPTORQ8N122 1335 aa14.71□□□□□ -0.05
SS18-225ENST00000585121 RBBP6Q7Z6E9 1792 aaKnown RBP14.71□□□□□ -0.05
SS18-225ENST00000585121 STRNO43815 780 aa14.71□□□□□ -0.06
SS18-225ENST00000585121 SHCBP1Q8NEM2 672 aa14.71□□□□□ -0.06
SS18-225ENST00000585121 TRIB2Q92519 343 aa14.71□□□□□ -0.06
SS18-225ENST00000585121 USP6NLQ92738 828 aa14.71□□□□□ -0.06
SS18-225ENST00000585121 SHISA4Q96DD7 197 aa14.71□□□□□ -0.06
SS18-225ENST00000585121 ATG4CQ96DT6 458 aa14.71□□□□□ -0.06
SS18-225ENST00000585121 MOV10L1Q9BXT6 1211 aaKnown RBP14.71□□□□□ -0.06
SS18-225ENST00000585121 PAK6Q9NQU5 681 aaPredicted RBP14.71□□□□□ -0.06
SS18-225ENST00000585121 DOCK3Q8IZD9 2030 aa14.7□□□□□ -0.06
SS18-225ENST00000585121 MYH8P13535 1937 aa14.7□□□□□ -0.06
SS18-225ENST00000585121 F5H6K3 240 aa14.7□□□□□ -0.06
SS18-225ENST00000585121 TTLL1O95922 423 aa14.7□□□□□ -0.06
SS18-225ENST00000585121 KLRC3Q07444 240 aa14.7□□□□□ -0.06
SS18-225ENST00000585121 ALX1Q15699 326 aa14.7□□□□□ -0.06
SS18-225ENST00000585121 FAM83BQ5T0W9 1011 aa14.7□□□□□ -0.06
SS18-225ENST00000585121 MFSD14CQ5VZR4 134 aa14.7□□□□□ -0.06
SS18-225ENST00000585121 NCAPG2Q86XI2 1143 aa14.7□□□□□ -0.06
SS18-225ENST00000585121 FAM227BQ96M60 508 aa14.7□□□□□ -0.06
SS18-225ENST00000585121 HTATIP2Q9BUP3 242 aa14.7□□□□□ -0.06
SS18-225ENST00000585121 MROH8Q9H579 483 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms