RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 DPP9Q86TI2 863 aa22.17■■□□□ 1.14
TOP3A-220ENST00000585031 ATXN2LQ8WWM7 1075 aaKnown RBP22.17■■□□□ 1.14
TOP3A-220ENST00000585031 TNNQ9UQP3 1299 aa22.17■■□□□ 1.14
TOP3A-220ENST00000585031 EVX2Q03828 476 aa22.16■■□□□ 1.14
TOP3A-220ENST00000585031 FAM47AQ5JRC9 791 aa22.16■■□□□ 1.14
TOP3A-220ENST00000585031 KIAA1755Q5JYT7 1200 aa22.16■■□□□ 1.14
TOP3A-220ENST00000585031 RNPC3Q96LT9 517 aaKnown RBP22.16■■□□□ 1.14
TOP3A-220ENST00000585031 TACC3Q9Y6A5 838 aa22.16■■□□□ 1.14
TOP3A-220ENST00000585031 A0A1W2PRG0 241 aa22.15■■□□□ 1.14
TOP3A-220ENST00000585031 GNAI3P08754 354 aa22.15■■□□□ 1.14
TOP3A-220ENST00000585031 SHMT1P34896 483 aa22.15■■□□□ 1.14
TOP3A-220ENST00000585031 USP14P54578 494 aa22.15■■□□□ 1.14
TOP3A-220ENST00000585031 TTC39AQ5SRH9 613 aa22.15■■□□□ 1.14
TOP3A-220ENST00000585031 MIGA1Q8NAN2 632 aa22.15■■□□□ 1.14
TOP3A-220ENST00000585031 FAM122AQ96E09 287 aa22.15■■□□□ 1.14
TOP3A-220ENST00000585031 CHD7Q9P2D1 2997 aa22.14■■□□□ 1.14
TOP3A-220ENST00000585031 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.14■■□□□ 1.13
TOP3A-220ENST00000585031 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.14■■□□□ 1.13
TOP3A-220ENST00000585031 ERCC3P19447 782 aa22.14■■□□□ 1.13
TOP3A-220ENST00000585031 CYP7A1P22680 504 aa22.14■■□□□ 1.13
TOP3A-220ENST00000585031 PLCD1P51178 756 aa22.14■■□□□ 1.13
TOP3A-220ENST00000585031 G3BP1Q13283 466 aaKnown RBP eCLIP22.14■■□□□ 1.13
TOP3A-220ENST00000585031 ABCB5Q2M3G0 1257 aa22.14■■□□□ 1.13
TOP3A-220ENST00000585031 CERKLQ49MI3 558 aaPredicted RBP22.14■■□□□ 1.13
TOP3A-220ENST00000585031 ASB2Q96Q27 587 aa22.14■■□□□ 1.13
TOP3A-220ENST00000585031 ZNF576Q9H609 170 aa22.14■■□□□ 1.13
TOP3A-220ENST00000585031 PARP14Q460N5 1801 aa22.14■■□□□ 1.13
TOP3A-220ENST00000585031 DNAJB2P25686 324 aa22.13■■□□□ 1.13
TOP3A-220ENST00000585031 TNNI3KQ59H18 835 aa22.13■■□□□ 1.13
TOP3A-220ENST00000585031 SPATC1LQ9H0A9 340 aa22.13■■□□□ 1.13
TOP3A-220ENST00000585031 SERPINB13Q9UIV8 391 aa22.13■■□□□ 1.13
TOP3A-220ENST00000585031 FPGT-TNNI3KV9GXZ4 949 aa22.13■■□□□ 1.13
TOP3A-220ENST00000585031 PLXNA1Q9UIW2 1896 aa22.13■■□□□ 1.13
TOP3A-220ENST00000585031 XIRP2A4UGR9 3374 aa22.13■■□□□ 1.13
TOP3A-220ENST00000585031 COL11A1P12107 1806 aaPredicted RBP22.13■■□□□ 1.13
TOP3A-220ENST00000585031 KIAA0355O15063 1070 aa22.12■■□□□ 1.13
TOP3A-220ENST00000585031 HOXD11P31277 338 aaPredicted RBP22.12■■□□□ 1.13
TOP3A-220ENST00000585031 SEPT2Q15019 361 aa22.12■■□□□ 1.13
TOP3A-220ENST00000585031 ATF7IPQ6VMQ6 1270 aa22.12■■□□□ 1.13
TOP3A-220ENST00000585031 EHD4Q9H223 541 aa22.12■■□□□ 1.13
TOP3A-220ENST00000585031 PHF24Q9UPV7 400 aa22.12■■□□□ 1.13
TOP3A-220ENST00000585031 STRNO43815 780 aa22.11■■□□□ 1.13
TOP3A-220ENST00000585031 COG2Q14746 738 aa22.11■■□□□ 1.13
TOP3A-220ENST00000585031 AKNAD1Q5T1N1 836 aa22.11■■□□□ 1.13
TOP3A-220ENST00000585031 MAML3Q96JK9 1138 aa22.11■■□□□ 1.13
TOP3A-220ENST00000585031 TLR7Q9NYK1 1049 aaKnown RBP22.11■■□□□ 1.13
TOP3A-220ENST00000585031 CLTBP09497 229 aa22.1■■□□□ 1.13
TOP3A-220ENST00000585031 RARSP54136 660 aaKnown RBP22.1■■□□□ 1.13
TOP3A-220ENST00000585031 MAP3K12Q12852 859 aa22.1■■□□□ 1.13
TOP3A-220ENST00000585031 GPR108Q9NPR9 543 aa22.1■■□□□ 1.13
TOP3A-220ENST00000585031 PGK1P00558 417 aa22.09■■□□□ 1.13
TOP3A-220ENST00000585031 TAL1P17542 331 aaPredicted RBP22.09■■□□□ 1.13
TOP3A-220ENST00000585031 USP5P45974 858 aa22.09■■□□□ 1.13
TOP3A-220ENST00000585031 CCDC158Q5M9N0 1113 aa22.09■■□□□ 1.13
TOP3A-220ENST00000585031 SHCBP1Q8NEM2 672 aa22.09■■□□□ 1.13
TOP3A-220ENST00000585031 ADAMTS19Q8TE59 1207 aa22.09■■□□□ 1.13
TOP3A-220ENST00000585031 TIFAQ96CG3 184 aa22.09■■□□□ 1.13
TOP3A-220ENST00000585031 ZNF512BQ96KM6 892 aaPredicted RBP22.09■■□□□ 1.13
TOP3A-220ENST00000585031 GNAI2P04899 355 aa22.08■■□□□ 1.13
TOP3A-220ENST00000585031 GABPAQ06546 454 aa22.08■■□□□ 1.13
TOP3A-220ENST00000585031 LENG1Q96BZ8 264 aaPredicted RBP22.08■■□□□ 1.13
TOP3A-220ENST00000585031 ANTXR1Q9H6X2 564 aa22.08■■□□□ 1.13
TOP3A-220ENST00000585031 HOXC10Q9NYD6 342 aa22.08■■□□□ 1.13
TOP3A-220ENST00000585031 DBNLQ9UJU6 430 aaKnown RBP22.08■■□□□ 1.13
TOP3A-220ENST00000585031 NAV1Q8NEY1 1877 aa22.07■■□□□ 1.12
TOP3A-220ENST00000585031 PQBP1O60828 265 aaKnown RBP22.07■■□□□ 1.12
TOP3A-220ENST00000585031 IDH1O75874 414 aaKnown RBP22.07■■□□□ 1.12
TOP3A-220ENST00000585031 RAG1P15918 1043 aa22.07■■□□□ 1.12
TOP3A-220ENST00000585031 PBX2P40425 430 aa22.07■■□□□ 1.12
TOP3A-220ENST00000585031 MRPS5P82675 430 aaKnown RBP22.07■■□□□ 1.12
TOP3A-220ENST00000585031 FPGSQ05932 587 aa22.07■■□□□ 1.12
TOP3A-220ENST00000585031 FAAP100Q0VG06 881 aa22.07■■□□□ 1.12
TOP3A-220ENST00000585031 POLA2Q14181 598 aa22.07■■□□□ 1.12
TOP3A-220ENST00000585031 SIAH1Q8IUQ4 282 aa22.07■■□□□ 1.12
TOP3A-220ENST00000585031 MAGEB6Q8N7X4 407 aa22.07■■□□□ 1.12
TOP3A-220ENST00000585031 ARHGAP45Q92619 1136 aa22.07■■□□□ 1.12
TOP3A-220ENST00000585031 ATG4CQ96DT6 458 aa22.07■■□□□ 1.12
TOP3A-220ENST00000585031 UHRF1Q96T88 793 aaPredicted RBP22.07■■□□□ 1.12
TOP3A-220ENST00000585031 CABP5Q9NP86 173 aa22.07■■□□□ 1.12
TOP3A-220ENST00000585031 XPNPEP3Q9NQH7 507 aa22.07■■□□□ 1.12
TOP3A-220ENST00000585031 THEGQ9P2T0 379 aa22.07■■□□□ 1.12
TOP3A-220ENST00000585031 A0A1W2PQ45 241 aaPredicted RBP22.06■■□□□ 1.12
TOP3A-220ENST00000585031 A0A1W2PQY0 241 aa22.06■■□□□ 1.12
TOP3A-220ENST00000585031 GRXCR1A8MXD5 290 aa22.06■■□□□ 1.12
TOP3A-220ENST00000585031 CT47B1P0C2W7 299 aaPredicted RBP22.06■■□□□ 1.12
TOP3A-220ENST00000585031 DSG3P32926 999 aa22.06■■□□□ 1.12
TOP3A-220ENST00000585031 C16orf59Q7L2K0 433 aa22.06■■□□□ 1.12
TOP3A-220ENST00000585031 NCAPG2Q86XI2 1143 aa22.06■■□□□ 1.12
TOP3A-220ENST00000585031 PPM1EQ8WY54 764 aa22.06■■□□□ 1.12
TOP3A-220ENST00000585031 TANGO6Q9C0B7 1094 aa22.06■■□□□ 1.12
TOP3A-220ENST00000585031 TCF20Q9UGU0 1960 aaKnown RBP22.05■■□□□ 1.12
TOP3A-220ENST00000585031 PLS1Q14651 629 aa22.05■■□□□ 1.12
TOP3A-220ENST00000585031 TTC6Q86TZ1 520 aa22.05■■□□□ 1.12
TOP3A-220ENST00000585031 CLEC10AQ8IUN9 316 aa22.05■■□□□ 1.12
TOP3A-220ENST00000585031 ABRAQ8N0Z2 381 aa22.05■■□□□ 1.12
TOP3A-220ENST00000585031 GAS2L1Q99501 681 aaPredicted RBP22.05■■□□□ 1.12
TOP3A-220ENST00000585031 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.05■■□□□ 1.125e-8■■■■□ 21.2
TOP3A-220ENST00000585031 RIOK1Q9BRS2 568 aaKnown RBP22.05■■□□□ 1.12
TOP3A-220ENST00000585031 CCDC8Q9H0W5 538 aaPredicted RBP22.05■■□□□ 1.12
TOP3A-220ENST00000585031 TMEM39AQ9NV64 488 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms