RNA–Protein interactions for RNA: ENST00000584997.1

CASC3-210, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-210ENST00000584997 LTBP2Q14767 1821 aa12.62□□□□□ -0.39
CASC3-210ENST00000584997 STRNO43815 780 aa12.61□□□□□ -0.39
CASC3-210ENST00000584997 MYCNP04198 464 aaPredicted RBP12.61□□□□□ -0.39
CASC3-210ENST00000584997 GUCY1A2P33402 732 aa12.61□□□□□ -0.39
CASC3-210ENST00000584997 COG2Q14746 738 aa12.61□□□□□ -0.39
CASC3-210ENST00000584997 TTF1Q15361 905 aaPredicted RBP12.61□□□□□ -0.39
CASC3-210ENST00000584997 GJC2Q5T442 439 aaPredicted RBP12.61□□□□□ -0.39
CASC3-210ENST00000584997 ZNF697Q5TEC3 545 aa12.61□□□□□ -0.39
CASC3-210ENST00000584997 FAM109BQ6ICB4 259 aaPredicted RBP12.61□□□□□ -0.39
CASC3-210ENST00000584997 ARRDC4Q8NCT1 418 aa12.61□□□□□ -0.39
CASC3-210ENST00000584997 TRPV1Q8NER1 839 aa12.61□□□□□ -0.39
CASC3-210ENST00000584997 FAM161BQ96MY7 647 aa12.61□□□□□ -0.39
CASC3-210ENST00000584997 MOV10L1Q9BXT6 1211 aaKnown RBP12.61□□□□□ -0.39
CASC3-210ENST00000584997 SPATC1LQ9H0A9 340 aa12.61□□□□□ -0.39
CASC3-210ENST00000584997 MCM9Q9NXL9 1143 aa12.61□□□□□ -0.39
CASC3-210ENST00000584997 SLC5A4Q9NY91 659 aa12.61□□□□□ -0.39
CASC3-210ENST00000584997 HOXC10Q9NYD6 342 aa12.61□□□□□ -0.39
CASC3-210ENST00000584997 A0A0G2JMZ2 1700 aa12.6□□□□□ -0.39
CASC3-210ENST00000584997 POTEB2H3BUK9 544 aa12.6□□□□□ -0.39
CASC3-210ENST00000584997 PLS1Q14651 629 aa12.6□□□□□ -0.39
CASC3-210ENST00000584997 SLC9C2Q5TAH2 1124 aa12.6□□□□□ -0.39
CASC3-210ENST00000584997 ANO1Q5XXA6 986 aa12.6□□□□□ -0.39
CASC3-210ENST00000584997 OLFML2BQ68BL8 750 aa12.6□□□□□ -0.39
CASC3-210ENST00000584997 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.6□□□□□ -0.39
CASC3-210ENST00000584997 GUCD1Q96NT3 240 aa12.6□□□□□ -0.39
CASC3-210ENST00000584997 PRDM5Q9NQX1 630 aaPredicted RBP12.6□□□□□ -0.39
CASC3-210ENST00000584997 EXOC6BQ9Y2D4 811 aa12.6□□□□□ -0.39
CASC3-210ENST00000584997 ZNFX1Q9P2E3 1918 aaKnown RBP12.59□□□□□ -0.39
CASC3-210ENST00000584997 A0A1W2PRG0 241 aa12.59□□□□□ -0.39
CASC3-210ENST00000584997 RLBP1P12271 317 aa12.59□□□□□ -0.39
CASC3-210ENST00000584997 PDE6AP16499 860 aa12.59□□□□□ -0.39
CASC3-210ENST00000584997 ERCC3P19447 782 aa12.59□□□□□ -0.39
CASC3-210ENST00000584997 GABPAQ06546 454 aa12.59□□□□□ -0.39
CASC3-210ENST00000584997 CEP85Q6P2H3 762 aa12.59□□□□□ -0.39
CASC3-210ENST00000584997 SLC39A5Q6ZMH5 540 aa12.59□□□□□ -0.39
CASC3-210ENST00000584997 TMEM179Q6ZVK1 233 aa12.59□□□□□ -0.39
CASC3-210ENST00000584997 MB21D1Q8N884 522 aa12.59□□□□□ -0.39
CASC3-210ENST00000584997 SHCBP1Q8NEM2 672 aa12.59□□□□□ -0.39
CASC3-210ENST00000584997 SEPT4O43236 478 aa12.58□□□□□ -0.4
CASC3-210ENST00000584997 FLOT1O75955 427 aa12.58□□□□□ -0.4
CASC3-210ENST00000584997 HSP90AB4PQ58FF6 505 aa12.58□□□□□ -0.4
CASC3-210ENST00000584997 SAMD1Q6SPF0 538 aaPredicted RBP12.58□□□□□ -0.4
CASC3-210ENST00000584997 NCAPG2Q86XI2 1143 aa12.58□□□□□ -0.4
CASC3-210ENST00000584997 SDR42E1Q8WUS8 393 aa12.58□□□□□ -0.4
CASC3-210ENST00000584997 DNAJC2Q99543 621 aaKnown RBP12.58□□□□□ -0.4
CASC3-210ENST00000584997 MROH8Q9H579 483 aa12.58□□□□□ -0.4
CASC3-210ENST00000584997 SH2D4AQ9H788 454 aa12.58□□□□□ -0.4
CASC3-210ENST00000584997 ARHGEF10LQ9HCE6 1279 aa12.58□□□□□ -0.4
CASC3-210ENST00000584997 IL1RAPL2Q9NP60 686 aa12.58□□□□□ -0.4
CASC3-210ENST00000584997 BAZ2AQ9UIF9 1905 aaKnown RBP12.58□□□□□ -0.4
CASC3-210ENST00000584997 ZNF532Q9HCE3 1301 aa12.58□□□□□ -0.4
CASC3-210ENST00000584997 PARP14Q460N5 1801 aa12.58□□□□□ -0.4
CASC3-210ENST00000584997 SMCHD1A6NHR9 2005 aa12.57□□□□□ -0.4
CASC3-210ENST00000584997 COBLO75128 1261 aa12.57□□□□□ -0.4
CASC3-210ENST00000584997 IGHA2P01877 340 aa12.57□□□□□ -0.4
CASC3-210ENST00000584997 EVX2Q03828 476 aa12.57□□□□□ -0.4
CASC3-210ENST00000584997 ICA1Q05084 483 aa12.57□□□□□ -0.4
CASC3-210ENST00000584997 TRIM60Q495X7 471 aa12.57□□□□□ -0.4
CASC3-210ENST00000584997 SPICE1Q8N0Z3 855 aa12.57□□□□□ -0.4
CASC3-210ENST00000584997 SLC44A5Q8NCS7 719 aa12.57□□□□□ -0.4
CASC3-210ENST00000584997 ATG4CQ96DT6 458 aa12.57□□□□□ -0.4
CASC3-210ENST00000584997 COL25A1Q9BXS0 654 aaPredicted RBP12.57□□□□□ -0.4
CASC3-210ENST00000584997 BCL11AQ9H165 835 aa12.57□□□□□ -0.4
CASC3-210ENST00000584997 DCP1AQ9NPI6 582 aaPredicted RBP12.57□□□□□ -0.4
CASC3-210ENST00000584997 SWAP70Q9UH65 585 aa12.57□□□□□ -0.4
CASC3-210ENST00000584997 COL11A1P12107 1806 aaPredicted RBP12.57□□□□□ -0.4
CASC3-210ENST00000584997 GOLIM4O00461 696 aa12.56□□□□□ -0.4
CASC3-210ENST00000584997 CYP2D6P10635 497 aa12.56□□□□□ -0.4
CASC3-210ENST00000584997 FCER1AP12319 257 aa12.56□□□□□ -0.4
CASC3-210ENST00000584997 DSG3P32926 999 aa12.56□□□□□ -0.4
CASC3-210ENST00000584997 ADCYAP1R1P41586 468 aa12.56□□□□□ -0.4
CASC3-210ENST00000584997 SHHQ15465 462 aa12.56□□□□□ -0.4
CASC3-210ENST00000584997 FAM47AQ5JRC9 791 aa12.56□□□□□ -0.4
CASC3-210ENST00000584997 PRAMEF19Q5SWL8 479 aa12.56□□□□□ -0.4
CASC3-210ENST00000584997 CLEC10AQ8IUN9 316 aa12.56□□□□□ -0.4
CASC3-210ENST00000584997 ABRAQ8N0Z2 381 aa12.56□□□□□ -0.4
CASC3-210ENST00000584997 CLASRPQ8N2M8 674 aaKnown RBP12.56□□□□□ -0.4
CASC3-210ENST00000584997 LCORLQ8N3X6 602 aa12.56□□□□□ -0.4
CASC3-210ENST00000584997 RHPN1Q8TCX5 695 aa12.56□□□□□ -0.4
CASC3-210ENST00000584997 BADQ92934 168 aa12.56□□□□□ -0.4
CASC3-210ENST00000584997 FERMT2Q96AC1 680 aa12.56□□□□□ -0.4
CASC3-210ENST00000584997 PDLIM7Q9NR12 457 aa12.56□□□□□ -0.4
CASC3-210ENST00000584997 PLXNA1Q9UIW2 1896 aa12.56□□□□□ -0.4
CASC3-210ENST00000584997 APBB1O00213 710 aa12.55□□□□□ -0.4
CASC3-210ENST00000584997 WDR46O15213 610 aaKnown RBP12.55□□□□□ -0.4
CASC3-210ENST00000584997 SLC25A27O95847 323 aa12.55□□□□□ -0.4
CASC3-210ENST00000584997 IFIT2P09913 472 aaKnown RBP12.55□□□□□ -0.4
CASC3-210ENST00000584997 AKR1B1P15121 316 aa12.55□□□□□ -0.4
CASC3-210ENST00000584997 SNX17Q15036 470 aa12.55□□□□□ -0.4
CASC3-210ENST00000584997 LRRC41Q15345 812 aa12.55□□□□□ -0.4
CASC3-210ENST00000584997 KIAA1755Q5JYT7 1200 aa12.55□□□□□ -0.4
CASC3-210ENST00000584997 C9orf50Q5SZB4 431 aa12.55□□□□□ -0.4
CASC3-210ENST00000584997 AMOTL1Q8IY63 956 aa12.55□□□□□ -0.4
CASC3-210ENST00000584997 DYNLL2Q96FJ2 89 aa12.55□□□□□ -0.4
CASC3-210ENST00000584997 MAML3Q96JK9 1138 aa12.55□□□□□ -0.4
CASC3-210ENST00000584997 VCPKMTQ9H867 229 aa12.55□□□□□ -0.4
CASC3-210ENST00000584997 ARMT1Q9H993 441 aa12.55□□□□□ -0.4
CASC3-210ENST00000584997 TMX2Q9Y320 296 aa12.55□□□□□ -0.4
CASC3-210ENST00000584997 TCRBV5S4A2TA0A5A2 114 aa12.54□□□□□ -0.4
CASC3-210ENST00000584997 RARBP10826 455 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms