RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 TSHZ3Q63HK5 1081 aa24.58■■□□□ 1.53
TOP3A-219ENST00000584887 SAMD1Q6SPF0 538 aaPredicted RBP24.58■■□□□ 1.53
TOP3A-219ENST00000584887 ARHGEF10LQ9HCE6 1279 aa24.58■■□□□ 1.53
TOP3A-219ENST00000584887 CDK8P49336 464 aa24.57■■□□□ 1.52
TOP3A-219ENST00000584887 CACNB2Q08289 660 aaPredicted RBP24.57■■□□□ 1.52
TOP3A-219ENST00000584887 C12orf60Q5U649 245 aa24.57■■□□□ 1.52
TOP3A-219ENST00000584887 ANKLE1Q8NAG6 615 aa24.57■■□□□ 1.52
TOP3A-219ENST00000584887 PUS7LQ9H0K6 701 aaKnown RBP24.57■■□□□ 1.52
TOP3A-219ENST00000584887 ATP2B2Q01814 1243 aa24.56■■□□□ 1.52
TOP3A-219ENST00000584887 LBX2Q6XYB7 198 aa24.56■■□□□ 1.52
TOP3A-219ENST00000584887 SPICE1Q8N0Z3 855 aa24.56■■□□□ 1.52
TOP3A-219ENST00000584887 RBM27Q9P2N5 1060 aaKnown RBP24.56■■□□□ 1.52
TOP3A-219ENST00000584887 SLC15A5A6NIM6 579 aa24.55■■□□□ 1.52
TOP3A-219ENST00000584887 PTPREP23469 700 aa24.55■■□□□ 1.52
TOP3A-219ENST00000584887 CCND3P30281 292 aaPredicted RBP24.55■■□□□ 1.52
TOP3A-219ENST00000584887 COG2Q14746 738 aa24.55■■□□□ 1.52
TOP3A-219ENST00000584887 KIAA1755Q5JYT7 1200 aa24.55■■□□□ 1.52
TOP3A-219ENST00000584887 CCDC17Q96LX7 622 aa24.55■■□□□ 1.52
TOP3A-219ENST00000584887 NBPF3Q9H094 633 aa24.55■■□□□ 1.52
TOP3A-219ENST00000584887 DCTPP1Q9H773 170 aa24.55■■□□□ 1.52
TOP3A-219ENST00000584887 SH2D4AQ9H788 454 aa24.55■■□□□ 1.52
TOP3A-219ENST00000584887 MFSD14CQ5VZR4 134 aa24.54■■□□□ 1.52
TOP3A-219ENST00000584887 C16orf86Q6ZW13 317 aa24.54■■□□□ 1.52
TOP3A-219ENST00000584887 C7orf61Q8IZ16 206 aa24.54■■□□□ 1.52
TOP3A-219ENST00000584887 C11orf49Q9H6J7 331 aa24.54■■□□□ 1.52
TOP3A-219ENST00000584887 HOXC10Q9NYD6 342 aa24.54■■□□□ 1.52
TOP3A-219ENST00000584887 OGDHLQ9ULD0 1010 aa24.54■■□□□ 1.52
TOP3A-219ENST00000584887 RAD21O60216 631 aa24.53■■□□□ 1.52
TOP3A-219ENST00000584887 FLOT1O75955 427 aa24.53■■□□□ 1.52
TOP3A-219ENST00000584887 PLS1Q14651 629 aa24.53■■□□□ 1.52
TOP3A-219ENST00000584887 CTR9Q6PD62 1173 aa24.53■■□□□ 1.52
TOP3A-219ENST00000584887 STK11IPQ8N1F8 1099 aa24.53■■□□□ 1.52
TOP3A-219ENST00000584887 LPAR1Q92633 364 aa24.53■■□□□ 1.52
TOP3A-219ENST00000584887 KBTBD3Q8NAB2 608 aa24.52■■□□□ 1.52
TOP3A-219ENST00000584887 MOV10L1Q9BXT6 1211 aaKnown RBP24.52■■□□□ 1.52
TOP3A-219ENST00000584887 VCPKMTQ9H867 229 aa24.52■■□□□ 1.52
TOP3A-219ENST00000584887 FLRT1Q9NZU1 646 aa24.52■■□□□ 1.52
TOP3A-219ENST00000584887 ARPP21Q9UBL0 812 aaPredicted RBP24.52■■□□□ 1.52
TOP3A-219ENST00000584887 TMX2Q9Y320 296 aa24.52■■□□□ 1.52
TOP3A-219ENST00000584887 ALPK3Q96L96 1907 aa24.51■■□□□ 1.51
TOP3A-219ENST00000584887 MNX1P50219 401 aaPredicted RBP24.51■■□□□ 1.51
TOP3A-219ENST00000584887 GRB14Q14449 540 aa24.51■■□□□ 1.51
TOP3A-219ENST00000584887 SIAH1Q8IUQ4 282 aa24.51■■□□□ 1.51
TOP3A-219ENST00000584887 STRBPQ96SI9 672 aaKnown RBP24.51■■□□□ 1.51
TOP3A-219ENST00000584887 SPATC1LQ9H0A9 340 aa24.51■■□□□ 1.51
TOP3A-219ENST00000584887 ZMYND8Q9ULU4 1186 aaPredicted RBP24.51■■□□□ 1.51
TOP3A-219ENST00000584887 EEF2P13639 858 aaKnown RBP24.5■■□□□ 1.51
TOP3A-219ENST00000584887 NPLOC4Q8TAT6 608 aa24.5■■□□□ 1.51
TOP3A-219ENST00000584887 ATG4CQ96DT6 458 aa24.5■■□□□ 1.51
TOP3A-219ENST00000584887 MINDY4BA8MYZ0 360 aa24.49■■□□□ 1.51
TOP3A-219ENST00000584887 RNF113AO15541 343 aaKnown RBP24.49■■□□□ 1.51
TOP3A-219ENST00000584887 ERCC3P19447 782 aa24.49■■□□□ 1.51
TOP3A-219ENST00000584887 CNGA1P29973 690 aa24.49■■□□□ 1.51
TOP3A-219ENST00000584887 DSG3P32926 999 aa24.49■■□□□ 1.51
TOP3A-219ENST00000584887 DPP9Q86TI2 863 aa24.49■■□□□ 1.51
TOP3A-219ENST00000584887 MB21D1Q8N884 522 aa24.49■■□□□ 1.51
TOP3A-219ENST00000584887 APPBP2Q92624 585 aa24.49■■□□□ 1.51
TOP3A-219ENST00000584887 OSBP2Q969R2 916 aa24.49■■□□□ 1.51
TOP3A-219ENST00000584887 KANSL2Q9H9L4 492 aa24.49■■□□□ 1.51
TOP3A-219ENST00000584887 WDR46O15213 610 aaKnown RBP24.48■■□□□ 1.51
TOP3A-219ENST00000584887 ADORA2AP29274 412 aa24.48■■□□□ 1.51
TOP3A-219ENST00000584887 CYP2C19P33261 490 aa24.48■■□□□ 1.51
TOP3A-219ENST00000584887 NCAPG2Q86XI2 1143 aa24.48■■□□□ 1.51
TOP3A-219ENST00000584887 STAP2Q9UGK3 403 aa24.48■■□□□ 1.51
TOP3A-219ENST00000584887 PCDHB15Q9Y5E8 787 aa24.48■■□□□ 1.51
TOP3A-219ENST00000584887 GSG1L2A8MUP6 293 aa24.47■■□□□ 1.51
TOP3A-219ENST00000584887 HOXC6P09630 235 aa24.47■■□□□ 1.51
TOP3A-219ENST00000584887 LHX8Q68G74 356 aa24.47■■□□□ 1.51
TOP3A-219ENST00000584887 SHCBP1Q8NEM2 672 aa24.47■■□□□ 1.51
TOP3A-219ENST00000584887 MKNK2Q9HBH9 465 aa24.47■■□□□ 1.51
TOP3A-219ENST00000584887 GOPCQ9HD26 462 aa24.47■■□□□ 1.51
TOP3A-219ENST00000584887 PFASO15067 1338 aa24.46■■□□□ 1.51
TOP3A-219ENST00000584887 RLFQ13129 1914 aa24.46■■□□□ 1.51
TOP3A-219ENST00000584887 GPAA1O43292 621 aa24.46■■□□□ 1.51
TOP3A-219ENST00000584887 APPP05067 770 aa24.46■■□□□ 1.51
TOP3A-219ENST00000584887 ZFYP08048 801 aaPredicted RBP24.46■■□□□ 1.51
TOP3A-219ENST00000584887 TDO2P48775 406 aa24.46■■□□□ 1.51
TOP3A-219ENST00000584887 PRO3102Q9H379 93 aa24.46■■□□□ 1.51
TOP3A-219ENST00000584887 A0A0G2JMZ2 1700 aa24.46■■□□□ 1.51
TOP3A-219ENST00000584887 M0R2C6 588 aa24.45■■□□□ 1.5
TOP3A-219ENST00000584887 STRNO43815 780 aa24.45■■□□□ 1.5
TOP3A-219ENST00000584887 SYN1P17600 705 aa24.45■■□□□ 1.5
TOP3A-219ENST00000584887 SBK1Q52WX2 424 aa24.45■■□□□ 1.5
TOP3A-219ENST00000584887 OTUD7AQ8TE49 926 aaPredicted RBP24.45■■□□□ 1.5
TOP3A-219ENST00000584887 FBXO28Q9NVF7 368 aa24.45■■□□□ 1.5
TOP3A-219ENST00000584887 ERC2O15083 957 aa24.44■■□□□ 1.5
TOP3A-219ENST00000584887 LRRFIP1Q32MZ4 808 aaKnown RBP24.44■■□□□ 1.5
TOP3A-219ENST00000584887 FAM83BQ5T0W9 1011 aa24.44■■□□□ 1.5
TOP3A-219ENST00000584887 GIMAP6Q6P9H5 292 aa24.44■■□□□ 1.5
TOP3A-219ENST00000584887 MROH8Q9H579 483 aa24.44■■□□□ 1.5
TOP3A-219ENST00000584887 DDX20Q9UHI6 824 aaKnown RBP24.44■■□□□ 1.5
TOP3A-219ENST00000584887 TTC41PQ6P2S7 1318 aa24.43■■□□□ 1.5
TOP3A-219ENST00000584887 RASA1P20936 1047 aa24.43■■□□□ 1.5
TOP3A-219ENST00000584887 RRP1P56182 461 aaKnown RBP24.43■■□□□ 1.5
TOP3A-219ENST00000584887 TMEM132BQ14DG7 1078 aa24.43■■□□□ 1.5
TOP3A-219ENST00000584887 FSD1Q9BTV5 496 aa24.43■■□□□ 1.5
TOP3A-219ENST00000584887 EPB41L4AQ9HCS5 686 aaPredicted RBP24.43■■□□□ 1.5
TOP3A-219ENST00000584887 SLC5A4Q9NY91 659 aa24.43■■□□□ 1.5
TOP3A-219ENST00000584887 COBLO75128 1261 aa24.42■■□□□ 1.5
TOP3A-219ENST00000584887 GNAT2P19087 354 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms