RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 FOSL2P15408 326 aa16.22■□□□□ 0.19
COPS3-218ENST00000584216 ERCC3P19447 782 aa16.22■□□□□ 0.19
COPS3-218ENST00000584216 ATP8B2P98198 1209 aa16.22■□□□□ 0.19
COPS3-218ENST00000584216 C9orf50Q5SZB4 431 aa16.22■□□□□ 0.19
COPS3-218ENST00000584216 CLUAP1Q96AJ1 413 aa16.22■□□□□ 0.19
COPS3-218ENST00000584216 SH2D4AQ9H788 454 aa16.22■□□□□ 0.19
COPS3-218ENST00000584216 PDLIM7Q9NR12 457 aa16.22■□□□□ 0.19
COPS3-218ENST00000584216 NRBP1Q9UHY1 535 aa16.22■□□□□ 0.19
COPS3-218ENST00000584216 TACC3Q9Y6A5 838 aa16.22■□□□□ 0.19
COPS3-218ENST00000584216 ZNF236Q9UL36 1845 aa16.22■□□□□ 0.19
COPS3-218ENST00000584216 ADCYAP1R1P41586 468 aa16.21■□□□□ 0.19
COPS3-218ENST00000584216 PLCD1P51178 756 aa16.21■□□□□ 0.19
COPS3-218ENST00000584216 SEPT2Q15019 361 aa16.21■□□□□ 0.19
COPS3-218ENST00000584216 LRRC41Q15345 812 aa16.21■□□□□ 0.19
COPS3-218ENST00000584216 TTF1Q15361 905 aaPredicted RBP16.21■□□□□ 0.19
COPS3-218ENST00000584216 CRNKL1Q9BZJ0 848 aaKnown RBP16.21■□□□□ 0.19
COPS3-218ENST00000584216 NOP58Q9Y2X3 529 aaKnown RBP16.21■□□□□ 0.19
COPS3-218ENST00000584216 CDK5RAP2Q96SN8 1893 aa16.2■□□□□ 0.18
COPS3-218ENST00000584216 MAGEB6P1A0A0J9YX57 407 aa16.2■□□□□ 0.18
COPS3-218ENST00000584216 RARBP10826 455 aa16.2■□□□□ 0.18
COPS3-218ENST00000584216 FCER1AP12319 257 aa16.2■□□□□ 0.18
COPS3-218ENST00000584216 GABPAQ06546 454 aa16.2■□□□□ 0.18
COPS3-218ENST00000584216 PLS1Q14651 629 aa16.2■□□□□ 0.18
COPS3-218ENST00000584216 ANO1Q5XXA6 986 aa16.2■□□□□ 0.18
COPS3-218ENST00000584216 TMEM179Q6ZVK1 233 aa16.2■□□□□ 0.18
COPS3-218ENST00000584216 RNF180Q86T96 592 aa16.2■□□□□ 0.18
COPS3-218ENST00000584216 NCAPG2Q86XI2 1143 aa16.2■□□□□ 0.18
COPS3-218ENST00000584216 MYLIPQ8WY64 445 aa16.2■□□□□ 0.18
COPS3-218ENST00000584216 RNPC3Q96LT9 517 aaKnown RBP16.2■□□□□ 0.18
COPS3-218ENST00000584216 CCDC8Q9H0W5 538 aaPredicted RBP16.2■□□□□ 0.18
COPS3-218ENST00000584216 ARHGEF10LQ9HCE6 1279 aa16.2■□□□□ 0.18
COPS3-218ENST00000584216 TLR7Q9NYK1 1049 aaKnown RBP16.2■□□□□ 0.18
COPS3-218ENST00000584216 LTBP2Q14767 1821 aa16.19■□□□□ 0.18
COPS3-218ENST00000584216 COBLO75128 1261 aa16.19■□□□□ 0.18
COPS3-218ENST00000584216 BCAR3O75815 825 aa16.19■□□□□ 0.18
COPS3-218ENST00000584216 FLOT1O75955 427 aa16.19■□□□□ 0.18
COPS3-218ENST00000584216 SLC25A27O95847 323 aa16.19■□□□□ 0.18
COPS3-218ENST00000584216 GUCY1A2P33402 732 aa16.19■□□□□ 0.18
COPS3-218ENST00000584216 ZKSCAN2Q63HK3 967 aa16.19■□□□□ 0.18
COPS3-218ENST00000584216 ERC1Q8IUD2 1116 aa16.19■□□□□ 0.18
COPS3-218ENST00000584216 TMEM57Q8N5G2 664 aa16.19■□□□□ 0.18
COPS3-218ENST00000584216 MAML3Q96JK9 1138 aa16.19■□□□□ 0.18
COPS3-218ENST00000584216 RIOK1Q9BRS2 568 aaKnown RBP16.19■□□□□ 0.18
COPS3-218ENST00000584216 XPNPEP3Q9NQH7 507 aa16.19■□□□□ 0.18
COPS3-218ENST00000584216 PRDM6Q9NQX0 595 aa16.19■□□□□ 0.18
COPS3-218ENST00000584216 MCM9Q9NXL9 1143 aa16.19■□□□□ 0.18
COPS3-218ENST00000584216 SWAP70Q9UH65 585 aa16.19■□□□□ 0.18
COPS3-218ENST00000584216 PHF24Q9UPV7 400 aa16.19■□□□□ 0.18
COPS3-218ENST00000584216 TRIM43BA6NCK2 446 aa16.18■□□□□ 0.18
COPS3-218ENST00000584216 CLTBP09497 229 aa16.18■□□□□ 0.18
COPS3-218ENST00000584216 DSG3P32926 999 aa16.18■□□□□ 0.18
COPS3-218ENST00000584216 TLE2Q04725 743 aa16.18■□□□□ 0.18
COPS3-218ENST00000584216 FAM47AQ5JRC9 791 aa16.18■□□□□ 0.18
COPS3-218ENST00000584216 FERMT2Q96AC1 680 aa16.18■□□□□ 0.18
COPS3-218ENST00000584216 TRIM43Q96BQ3 446 aaPredicted RBP16.18■□□□□ 0.18
COPS3-218ENST00000584216 EAF2Q96CJ1 260 aaPredicted RBP16.18■□□□□ 0.18
COPS3-218ENST00000584216 TTYH1Q9H313 450 aaPredicted RBP16.18■□□□□ 0.18
COPS3-218ENST00000584216 A0A1W2PRG0 241 aa16.17■□□□□ 0.18
COPS3-218ENST00000584216 RAG1P15918 1043 aa16.17■□□□□ 0.18
COPS3-218ENST00000584216 COPB2P35606 906 aa16.17■□□□□ 0.18
COPS3-218ENST00000584216 FTSJ3Q8IY81 847 aaKnown RBP16.17■□□□□ 0.18
COPS3-218ENST00000584216 ANTXR1Q9H6X2 564 aa16.17■□□□□ 0.18
COPS3-218ENST00000584216 TNNQ9UQP3 1299 aa16.17■□□□□ 0.18
COPS3-218ENST00000584216 MYH1P12882 1939 aa16.17■□□□□ 0.18
COPS3-218ENST00000584216 DNAH12Q6ZR08 3092 aa16.17■□□□□ 0.18
COPS3-218ENST00000584216 ROBO3Q96MS0 1386 aa16.16■□□□□ 0.18
COPS3-218ENST00000584216 KIAA0355O15063 1070 aa16.16■□□□□ 0.18
COPS3-218ENST00000584216 WDR46O15213 610 aaKnown RBP16.16■□□□□ 0.18
COPS3-218ENST00000584216 ICA1Q05084 483 aa16.16■□□□□ 0.18
COPS3-218ENST00000584216 FPGSQ05932 587 aa16.16■□□□□ 0.18
COPS3-218ENST00000584216 KCTD2Q14681 263 aa16.16■□□□□ 0.18
COPS3-218ENST00000584216 PRAMEF19Q5SWL8 479 aa16.16■□□□□ 0.18
COPS3-218ENST00000584216 SLC9C2Q5TAH2 1124 aa16.16■□□□□ 0.18
COPS3-218ENST00000584216 SH3RF1Q7Z6J0 888 aa16.16■□□□□ 0.18
COPS3-218ENST00000584216 MMP19Q99542 508 aa16.16■□□□□ 0.18
COPS3-218ENST00000584216 DIS3Q9Y2L1 958 aaKnown RBP16.16■□□□□ 0.18
COPS3-218ENST00000584216 TMX2Q9Y320 296 aa16.16■□□□□ 0.18
COPS3-218ENST00000584216 RLFQ13129 1914 aa16.15■□□□□ 0.18
COPS3-218ENST00000584216 LAMA2P24043 3122 aaKnown RBP16.15■□□□□ 0.18
COPS3-218ENST00000584216 VCANP13611 3396 aa16.15■□□□□ 0.18
COPS3-218ENST00000584216 AKR1A1P14550 325 aa16.15■□□□□ 0.18
COPS3-218ENST00000584216 HSP90AB4PQ58FF6 505 aa16.15■□□□□ 0.18
COPS3-218ENST00000584216 CCDC174Q6PII3 467 aa16.15■□□□□ 0.18
COPS3-218ENST00000584216 AACSQ86V21 672 aa16.15■□□□□ 0.18
COPS3-218ENST00000584216 AMOTL1Q8IY63 956 aa16.15■□□□□ 0.18
COPS3-218ENST00000584216 NUP133Q8WUM0 1156 aa16.15■□□□□ 0.18
COPS3-218ENST00000584216 ATG4CQ96DT6 458 aa16.15■□□□□ 0.18
COPS3-218ENST00000584216 CCDC17Q96LX7 622 aa16.15■□□□□ 0.18
COPS3-218ENST00000584216 VCPKMTQ9H867 229 aa16.15■□□□□ 0.18
COPS3-218ENST00000584216 CNPY2Q9Y2B0 182 aa16.15■□□□□ 0.18
COPS3-218ENST00000584216 A0A0G2JMZ2 1700 aa16.14■□□□□ 0.17
COPS3-218ENST00000584216 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.14■□□□□ 0.17
COPS3-218ENST00000584216 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.14■□□□□ 0.17
COPS3-218ENST00000584216 A0A1W2PQ45 241 aaPredicted RBP16.14■□□□□ 0.17
COPS3-218ENST00000584216 A0A1W2PQY0 241 aa16.14■□□□□ 0.17
COPS3-218ENST00000584216 DCDC2CA8MYV0 355 aa16.14■□□□□ 0.17
COPS3-218ENST00000584216 PQBP1O60828 265 aaKnown RBP16.14■□□□□ 0.17
COPS3-218ENST00000584216 PDE6AP16499 860 aa16.14■□□□□ 0.17
COPS3-218ENST00000584216 ITPRIPQ8IWB1 547 aa16.14■□□□□ 0.17
COPS3-218ENST00000584216 SPICE1Q8N0Z3 855 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms