RNA–Protein interactions for RNA: ENST00000583908.1

NARF-222, Transcript of nuclear prelamin A recognition factor, human

TSL 3

Gene NARF, Length 430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NARF-222	ENST00000583908	JAG1	P78504	1218 aa		11.7	□□□□□ -0.54
NARF-222	ENST00000583908	LACTB	P83111	547 aa	Predicted RBP	11.7	□□□□□ -0.54
NARF-222	ENST00000583908	TFAP4	Q01664	338 aa		11.7	□□□□□ -0.54
NARF-222	ENST00000583908	EVX2	Q03828	476 aa		11.7	□□□□□ -0.54
NARF-222	ENST00000583908	CTDSPL2	Q05D32	466 aa		11.7	□□□□□ -0.54
NARF-222	ENST00000583908	SHROOM1	Q2M3G4	852 aa	Predicted RBP	11.7	□□□□□ -0.54
NARF-222	ENST00000583908	COL13A1	Q5TAT6	717 aa	Predicted RBP	11.7	□□□□□ -0.54
NARF-222	ENST00000583908	C17orf99	Q6UX52	265 aa		11.7	□□□□□ -0.54
NARF-222	ENST00000583908	ACER1	Q8TDN7	264 aa		11.7	□□□□□ -0.54
NARF-222	ENST00000583908	KRT23	Q9C075	422 aa		11.7	□□□□□ -0.54
NARF-222	ENST00000583908	ASCC2	Q9H1I8	757 aa	Predicted RBP	11.7	□□□□□ -0.54
NARF-222	ENST00000583908	RPAP3	Q9H6T3	665 aa	Predicted RBP	11.7	□□□□□ -0.54
NARF-222	ENST00000583908	EMILIN3	Q9NT22	766 aa		11.7	□□□□□ -0.54
NARF-222	ENST00000583908	CPA4	Q9UI42	421 aa		11.7	□□□□□ -0.54
NARF-222	ENST00000583908	STX8	Q9UNK0	236 aa		11.7	□□□□□ -0.54
NARF-222	ENST00000583908	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	11.7	□□□□□ -0.54
NARF-222	ENST00000583908	MYPN	Q86TC9	1320 aa		11.69	□□□□□ -0.54
NARF-222	ENST00000583908	FOXP2	O15409	715 aa		11.69	□□□□□ -0.54
NARF-222	ENST00000583908	FMNL1	O95466	1100 aa	Predicted RBP	11.69	□□□□□ -0.54
NARF-222	ENST00000583908	HAND2	P61296	217 aa		11.69	□□□□□ -0.54
NARF-222	ENST00000583908	HERVK_113	P62684	666 aa		11.69	□□□□□ -0.54
NARF-222	ENST00000583908	RALYL	Q86SE5	291 aa	Known RBP	11.69	□□□□□ -0.54
NARF-222	ENST00000583908	MB21D1	Q8N884	522 aa		11.69	□□□□□ -0.54
NARF-222	ENST00000583908	CD99L2	Q8TCZ2	262 aa		11.69	□□□□□ -0.54
NARF-222	ENST00000583908	CEP95	Q96GE4	821 aa		11.69	□□□□□ -0.54
NARF-222	ENST00000583908	MTMR4	Q9NYA4	1195 aa		11.69	□□□□□ -0.54
NARF-222	ENST00000583908	HOXC10	Q9NYD6	342 aa		11.69	□□□□□ -0.54
NARF-222	ENST00000583908	ISY1	Q9ULR0	285 aa	Known RBP	11.69	□□□□□ -0.54
NARF-222	ENST00000583908	TRIM17	Q9Y577	477 aa		11.69	□□□□□ -0.54
NARF-222	ENST00000583908	CTDP1	Q9Y5B0	961 aa	Predicted RBP	11.69	□□□□□ -0.54
NARF-222	ENST00000583908	LAMA4	Q16363	1823 aa		11.69	□□□□□ -0.54
NARF-222	ENST00000583908	ADGRA2	Q96PE1	1338 aa		11.68	□□□□□ -0.54
NARF-222	ENST00000583908	FLOT1	O75955	427 aa		11.68	□□□□□ -0.54
NARF-222	ENST00000583908	FAM47A	Q5JRC9	791 aa		11.68	□□□□□ -0.54
NARF-222	ENST00000583908	RNF20	Q5VTR2	975 aa		11.68	□□□□□ -0.54
NARF-222	ENST00000583908	FBXO46	Q6PJ61	603 aa	Predicted RBP	11.68	□□□□□ -0.54
NARF-222	ENST00000583908	CATSPERG	Q6ZRH7	1159 aa		11.68	□□□□□ -0.54
NARF-222	ENST00000583908	ANKRD13C	Q8N6S4	541 aa		11.68	□□□□□ -0.54
NARF-222	ENST00000583908	GMCL1P1	Q8NEA9	526 aa		11.68	□□□□□ -0.54
NARF-222	ENST00000583908	GPRC5A	Q8NFJ5	357 aa		11.68	□□□□□ -0.54
NARF-222	ENST00000583908	COA7	Q96BR5	231 aa		11.68	□□□□□ -0.54
NARF-222	ENST00000583908	ESYT1	Q9BSJ8	1104 aa		11.68	□□□□□ -0.54
NARF-222	ENST00000583908	UBAC1	Q9BSL1	405 aa		11.68	□□□□□ -0.54
NARF-222	ENST00000583908	ANO2	Q9NQ90	1003 aa		11.68	□□□□□ -0.54
NARF-222	ENST00000583908	CLIP2	Q9UDT6	1046 aa		11.68	□□□□□ -0.54
NARF-222	ENST00000583908	IGKV6D-41	A0A0C4DH26	115 aa		11.67	□□□□□ -0.54
NARF-222	ENST00000583908		A0A1W2PRG0	241 aa		11.67	□□□□□ -0.54
NARF-222	ENST00000583908	ERICH2	A1L162	156 aa		11.67	□□□□□ -0.54
NARF-222	ENST00000583908	TNPO2	O14787	897 aa	Known RBP	11.67	□□□□□ -0.54
NARF-222	ENST00000583908	FGR	P09769	529 aa		11.67	□□□□□ -0.54
NARF-222	ENST00000583908	BCR	P11274	1271 aa		11.67	□□□□□ -0.54
NARF-222	ENST00000583908	HOXD11	P31277	338 aa	Predicted RBP	11.67	□□□□□ -0.54
NARF-222	ENST00000583908	COG2	Q14746	738 aa		11.67	□□□□□ -0.54
NARF-222	ENST00000583908	SART3	Q15020	963 aa	Known RBP	11.67	□□□□□ -0.54
NARF-222	ENST00000583908	SPICE1	Q8N0Z3	855 aa		11.67	□□□□□ -0.54
NARF-222	ENST00000583908	MCOLN1	Q9GZU1	580 aa		11.67	□□□□□ -0.54
NARF-222	ENST00000583908	R3HDML	Q9H3Y0	253 aa		11.67	□□□□□ -0.54
NARF-222	ENST00000583908	TCP11L1	Q9NUJ3	509 aa		11.67	□□□□□ -0.54
NARF-222	ENST00000583908	MORF4L1	Q9UBU8	362 aa		11.67	□□□□□ -0.54
NARF-222	ENST00000583908	RABGAP1	Q9Y3P9	1069 aa		11.67	□□□□□ -0.54
NARF-222	ENST00000583908	GREB1L	Q9C091	1923 aa	Predicted RBP	11.66	□□□□□ -0.54
NARF-222	ENST00000583908	SMIM22	K7EJ46	135 aa		11.66	□□□□□ -0.54
NARF-222	ENST00000583908	REC8	O95072	547 aa		11.66	□□□□□ -0.54
NARF-222	ENST00000583908	TOP1	P11387	765 aa	Known RBP	11.66	□□□□□ -0.54
NARF-222	ENST00000583908	MAPK4	P31152	587 aa		11.66	□□□□□ -0.54
NARF-222	ENST00000583908	COPB2	P35606	906 aa		11.66	□□□□□ -0.54
NARF-222	ENST00000583908	PSMC4	P43686	418 aa		11.66	□□□□□ -0.54
NARF-222	ENST00000583908	IK	Q13123	557 aa	Predicted RBP	11.66	□□□□□ -0.54
NARF-222	ENST00000583908	LBX2	Q6XYB7	198 aa		11.66	□□□□□ -0.54
NARF-222	ENST00000583908	OTOP1	Q7RTM1	612 aa		11.66	□□□□□ -0.54
NARF-222	ENST00000583908	CLEC10A	Q8IUN9	316 aa		11.66	□□□□□ -0.54
NARF-222	ENST00000583908	TBC1D10C	Q8IV04	446 aa		11.66	□□□□□ -0.54
NARF-222	ENST00000583908	LRRC47	Q8N1G4	583 aa	Known RBP	11.66	□□□□□ -0.54
NARF-222	ENST00000583908	RAET1E	Q8TD07	263 aa		11.66	□□□□□ -0.54
NARF-222	ENST00000583908	SOCS4	Q8WXH5	440 aa		11.66	□□□□□ -0.54
NARF-222	ENST00000583908	MKL1	Q969V6	931 aa		11.66	□□□□□ -0.54
NARF-222	ENST00000583908	TTC14	Q96N46	770 aa		11.66	□□□□□ -0.54
NARF-222	ENST00000583908	PAGR1	Q9BTK6	254 aa		11.66	□□□□□ -0.54
NARF-222	ENST00000583908	CASP8AP2	Q9UKL3	1982 aa		11.66	□□□□□ -0.54
NARF-222	ENST00000583908		F5H6K3	240 aa		11.65	□□□□□ -0.54
NARF-222	ENST00000583908	NDUFB10	O96000	172 aa		11.65	□□□□□ -0.54
NARF-222	ENST00000583908	FDX1	P10109	184 aa		11.65	□□□□□ -0.54
NARF-222	ENST00000583908	ZKSCAN1	P17029	563 aa	Predicted RBP	11.65	□□□□□ -0.54
NARF-222	ENST00000583908	SLC1A4	P43007	532 aa		11.65	□□□□□ -0.54
NARF-222	ENST00000583908	ERVK-9	P63128	1117 aa		11.65	□□□□□ -0.54
NARF-222	ENST00000583908	ERVK-24	P63145	666 aa		11.65	□□□□□ -0.54
NARF-222	ENST00000583908	KLRC3	Q07444	240 aa		11.65	□□□□□ -0.54
NARF-222	ENST00000583908	SLFN13	Q68D06	897 aa		11.65	□□□□□ -0.54
NARF-222	ENST00000583908	NBPF11	Q86T75	865 aa		11.65	□□□□□ -0.54
NARF-222	ENST00000583908	FAM160B2	Q86V87	743 aa		11.65	□□□□□ -0.54
NARF-222	ENST00000583908	NCOA7	Q8NI08	942 aa		11.65	□□□□□ -0.54
NARF-222	ENST00000583908	GMCL1	Q96IK5	515 aa		11.65	□□□□□ -0.54
NARF-222	ENST00000583908	P2RX7	Q99572	595 aa	Known RBP	11.65	□□□□□ -0.54
NARF-222	ENST00000583908	SLF1	Q9BQI6	1058 aa		11.65	□□□□□ -0.54
NARF-222	ENST00000583908	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.65	□□□□□ -0.54
NARF-222	ENST00000583908	FEM1B	Q9UK73	627 aa		11.65	□□□□□ -0.54
NARF-222	ENST00000583908	RBM8A	Q9Y5S9	174 aa	Known RBP	11.65	□□□□□ -0.54
NARF-222	ENST00000583908	IVNS1ABP	Q9Y6Y0	642 aa		11.65	□□□□□ -0.54
NARF-222	ENST00000583908	NEDD4	P46934	1319 aa		11.64	□□□□□ -0.55
NARF-222	ENST00000583908	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.64	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms