RNA–Protein interactions for RNA: ENST00000583593.2

CCDC57-218, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-218ENST00000583593 IVNS1ABPQ9Y6Y0 642 aa16.34■□□□□ 0.21
CCDC57-218ENST00000583593 ZNF532Q9HCE3 1301 aa16.34■□□□□ 0.21
CCDC57-218ENST00000583593 CYBAP13498 195 aa16.33■□□□□ 0.2
CCDC57-218ENST00000583593 CNGA1P29973 690 aa16.33■□□□□ 0.2
CCDC57-218ENST00000583593 COG2Q14746 738 aa16.33■□□□□ 0.2
CCDC57-218ENST00000583593 SLFNL1Q499Z3 407 aa16.33■□□□□ 0.2
CCDC57-218ENST00000583593 LCORLQ8N3X6 602 aa16.33■□□□□ 0.2
CCDC57-218ENST00000583593 SLC44A5Q8NCS7 719 aa16.33■□□□□ 0.2
CCDC57-218ENST00000583593 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.33■□□□□ 0.2
CCDC57-218ENST00000583593 CRNKL1Q9BZJ0 848 aaKnown RBP16.33■□□□□ 0.2
CCDC57-218ENST00000583593 PARP14Q460N5 1801 aa16.33■□□□□ 0.2
CCDC57-218ENST00000583593 MYH8P13535 1937 aa16.33■□□□□ 0.2
CCDC57-218ENST00000583593 SMIM22K7EJ46 135 aa16.32■□□□□ 0.2
CCDC57-218ENST00000583593 GOLIM4O00461 696 aa16.32■□□□□ 0.2
CCDC57-218ENST00000583593 MPHOSPH10O00566 681 aaKnown RBP16.32■□□□□ 0.2
CCDC57-218ENST00000583593 MSCO60682 206 aa16.32■□□□□ 0.2
CCDC57-218ENST00000583593 COBLO75128 1261 aa16.32■□□□□ 0.2
CCDC57-218ENST00000583593 ADORA2AP29274 412 aa16.32■□□□□ 0.2
CCDC57-218ENST00000583593 LTBP2Q14767 1821 aa16.32■□□□□ 0.2
CCDC57-218ENST00000583593 SIRT2Q8IXJ6 389 aa16.32■□□□□ 0.2
CCDC57-218ENST00000583593 DYNLL2Q96FJ2 89 aa16.32■□□□□ 0.2
CCDC57-218ENST00000583593 SPATC1LQ9H0A9 340 aa16.32■□□□□ 0.2
CCDC57-218ENST00000583593 HOXC10Q9NYD6 342 aa16.32■□□□□ 0.2
CCDC57-218ENST00000583593 BAZ2AQ9UIF9 1905 aaKnown RBP16.32■□□□□ 0.2
CCDC57-218ENST00000583593 STXBP5LQ9Y2K9 1186 aa16.32■□□□□ 0.2
CCDC57-218ENST00000583593 EYSQ5T1H1 3165 aa16.32■□□□□ 0.2
CCDC57-218ENST00000583593 DNM1LO00429 736 aa16.31■□□□□ 0.2
CCDC57-218ENST00000583593 STRNO43815 780 aa16.31■□□□□ 0.2
CCDC57-218ENST00000583593 ATN1P54259 1190 aaPredicted RBP16.31■□□□□ 0.2
CCDC57-218ENST00000583593 HSP90AB4PQ58FF6 505 aa16.31■□□□□ 0.2
CCDC57-218ENST00000583593 OLFML2BQ68BL8 750 aa16.31■□□□□ 0.2
CCDC57-218ENST00000583593 CLEC10AQ8IUN9 316 aa16.31■□□□□ 0.2
CCDC57-218ENST00000583593 SHCBP1Q8NEM2 672 aa16.31■□□□□ 0.2
CCDC57-218ENST00000583593 DNAJC2Q99543 621 aaKnown RBP16.31■□□□□ 0.2
CCDC57-218ENST00000583593 ZNFX1Q9P2E3 1918 aaKnown RBP16.3■□□□□ 0.2
CCDC57-218ENST00000583593 APBB1O00213 710 aa16.3■□□□□ 0.2
CCDC57-218ENST00000583593 PRKAB2O43741 272 aa16.3■□□□□ 0.2
CCDC57-218ENST00000583593 CHGBP05060 677 aa16.3■□□□□ 0.2
CCDC57-218ENST00000583593 AKR1B1P15121 316 aa16.3■□□□□ 0.2
CCDC57-218ENST00000583593 ERCC3P19447 782 aa16.3■□□□□ 0.2
CCDC57-218ENST00000583593 DSG3P32926 999 aa16.3■□□□□ 0.2
CCDC57-218ENST00000583593 GJC2Q5T442 439 aaPredicted RBP16.3■□□□□ 0.2
CCDC57-218ENST00000583593 ANO1Q5XXA6 986 aa16.3■□□□□ 0.2
CCDC57-218ENST00000583593 TMEM179Q6ZVK1 233 aa16.3■□□□□ 0.2
CCDC57-218ENST00000583593 DPP9Q86TI2 863 aa16.3■□□□□ 0.2
CCDC57-218ENST00000583593 CLASRPQ8N2M8 674 aaKnown RBP16.3■□□□□ 0.2
CCDC57-218ENST00000583593 KIF1BPQ96EK5 621 aa16.3■□□□□ 0.2
CCDC57-218ENST00000583593 TANGO6Q9C0B7 1094 aa16.3■□□□□ 0.2
CCDC57-218ENST00000583593 ARMT1Q9H993 441 aa16.3■□□□□ 0.2
CCDC57-218ENST00000583593 COL11A1P12107 1806 aaPredicted RBP16.29■□□□□ 0.2
CCDC57-218ENST00000583593 POTEB2H3BUK9 544 aa16.29■□□□□ 0.2
CCDC57-218ENST00000583593 ATG4CQ96DT6 458 aa16.29■□□□□ 0.2
CCDC57-218ENST00000583593 TMX2Q9Y320 296 aa16.29■□□□□ 0.2
CCDC57-218ENST00000583593 ADD2P35612 726 aa16.28■□□□□ 0.2
CCDC57-218ENST00000583593 RTP1P59025 263 aa16.28■□□□□ 0.2
CCDC57-218ENST00000583593 PRAMEF19Q5SWL8 479 aa16.28■□□□□ 0.2
CCDC57-218ENST00000583593 RPAP2Q8IXW5 612 aaPredicted RBP16.28■□□□□ 0.2
CCDC57-218ENST00000583593 SPICE1Q8N0Z3 855 aa16.28■□□□□ 0.2
CCDC57-218ENST00000583593 VCPKMTQ9H867 229 aa16.28■□□□□ 0.2
CCDC57-218ENST00000583593 SWAP70Q9UH65 585 aa16.28■□□□□ 0.2
CCDC57-218ENST00000583593 CDH23Q9H251 3354 aa16.27■□□□□ 0.2
CCDC57-218ENST00000583593 CYP2D7A0A087X1C5 515 aa16.27■□□□□ 0.2
CCDC57-218ENST00000583593 SEPT4O43236 478 aa16.27■□□□□ 0.2
CCDC57-218ENST00000583593 MBD4O95243 580 aa16.27■□□□□ 0.2
CCDC57-218ENST00000583593 IFIT2P09913 472 aaKnown RBP16.27■□□□□ 0.2
CCDC57-218ENST00000583593 TMEM132BQ14DG7 1078 aa16.27■□□□□ 0.2
CCDC57-218ENST00000583593 C12orf60Q5U649 245 aa16.27■□□□□ 0.2
CCDC57-218ENST00000583593 SLC39A5Q6ZMH5 540 aa16.27■□□□□ 0.2
CCDC57-218ENST00000583593 ABRAQ8N0Z2 381 aa16.27■□□□□ 0.2
CCDC57-218ENST00000583593 MIER1Q8N108 512 aa16.27■□□□□ 0.2
CCDC57-218ENST00000583593 MB21D1Q8N884 522 aa16.27■□□□□ 0.2
CCDC57-218ENST00000583593 BOLA2Q9H3K6 86 aa16.27■□□□□ 0.2
CCDC57-218ENST00000583593 MROH8Q9H579 483 aa16.27■□□□□ 0.2
CCDC57-218ENST00000583593 ATP8A2Q9NTI2 1148 aa16.27■□□□□ 0.2
CCDC57-218ENST00000583593 ZBTB40Q9NUA8 1239 aa16.27■□□□□ 0.2
CCDC57-218ENST00000583593 PAG1Q9NWQ8 432 aa16.27■□□□□ 0.2
CCDC57-218ENST00000583593 ADAMTS5Q9UNA0 930 aa16.27■□□□□ 0.2
CCDC57-218ENST00000583593 SMCHD1A6NHR9 2005 aa16.27■□□□□ 0.2
CCDC57-218ENST00000583593 MYH7P12883 1935 aa16.27■□□□□ 0.19
CCDC57-218ENST00000583593 FLOT1O75955 427 aa16.26■□□□□ 0.19
CCDC57-218ENST00000583593 CDK8P49336 464 aa16.26■□□□□ 0.19
CCDC57-218ENST00000583593 ICA1Q05084 483 aa16.26■□□□□ 0.19
CCDC57-218ENST00000583593 PLS1Q14651 629 aa16.26■□□□□ 0.19
CCDC57-218ENST00000583593 FAM109BQ6ICB4 259 aaPredicted RBP16.26■□□□□ 0.19
CCDC57-218ENST00000583593 NCAPG2Q86XI2 1143 aa16.26■□□□□ 0.19
CCDC57-218ENST00000583593 ARRDC4Q8NCT1 418 aa16.26■□□□□ 0.19
CCDC57-218ENST00000583593 MAML3Q96JK9 1138 aa16.26■□□□□ 0.19
CCDC57-218ENST00000583593 GUCD1Q96NT3 240 aa16.26■□□□□ 0.19
CCDC57-218ENST00000583593 LBHD1Q9BQE6 289 aaPredicted RBP16.26■□□□□ 0.19
CCDC57-218ENST00000583593 BCL11AQ9H165 835 aa16.26■□□□□ 0.19
CCDC57-218ENST00000583593 ARHGEF10LQ9HCE6 1279 aa16.26■□□□□ 0.19
CCDC57-218ENST00000583593 USP17L12C9JPN9 530 aa16.25■□□□□ 0.19
CCDC57-218ENST00000583593 USP17L21D6R901 530 aa16.25■□□□□ 0.19
CCDC57-218ENST00000583593 WDR46O15213 610 aaKnown RBP16.25■□□□□ 0.19
CCDC57-218ENST00000583593 ATP5JP18859 108 aa16.25■□□□□ 0.19
CCDC57-218ENST00000583593 SNX17Q15036 470 aa16.25■□□□□ 0.19
CCDC57-218ENST00000583593 C16orf86Q6ZW13 317 aa16.25■□□□□ 0.19
CCDC57-218ENST00000583593 ATP11BQ9Y2G3 1177 aa16.25■□□□□ 0.19
CCDC57-218ENST00000583593 VCANP13611 3396 aa16.25■□□□□ 0.19
CCDC57-218ENST00000583593 PLXNA1Q9UIW2 1896 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms