RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 GABPAQ06546 454 aa11.71□□□□□ -0.53
CDK5RAP3-227ENST00000583352 GRB14Q14449 540 aa11.71□□□□□ -0.53
CDK5RAP3-227ENST00000583352 LRRC26Q2I0M4 334 aa11.71□□□□□ -0.53
CDK5RAP3-227ENST00000583352 SLC9C2Q5TAH2 1124 aa11.71□□□□□ -0.53
CDK5RAP3-227ENST00000583352 CLASRPQ8N2M8 674 aaKnown RBP11.71□□□□□ -0.53
CDK5RAP3-227ENST00000583352 FLRT1Q9NZU1 646 aa11.71□□□□□ -0.53
CDK5RAP3-227ENST00000583352 DDX20Q9UHI6 824 aaKnown RBP11.71□□□□□ -0.53
CDK5RAP3-227ENST00000583352 FRMPD3Q5JV73 1810 aa11.7□□□□□ -0.54
CDK5RAP3-227ENST00000583352 ZNF532Q9HCE3 1301 aa11.7□□□□□ -0.54
CDK5RAP3-227ENST00000583352 IFIT2P09913 472 aaKnown RBP11.7□□□□□ -0.54
CDK5RAP3-227ENST00000583352 COG2Q14746 738 aa11.7□□□□□ -0.54
CDK5RAP3-227ENST00000583352 DPP9Q86TI2 863 aa11.7□□□□□ -0.54
CDK5RAP3-227ENST00000583352 SMC5Q8IY18 1101 aa11.7□□□□□ -0.54
CDK5RAP3-227ENST00000583352 DEFB123Q8N688 67 aa11.7□□□□□ -0.54
CDK5RAP3-227ENST00000583352 NPLOC4Q8TAT6 608 aa11.7□□□□□ -0.54
CDK5RAP3-227ENST00000583352 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.7□□□□□ -0.54
CDK5RAP3-227ENST00000583352 DNAJC2Q99543 621 aaKnown RBP11.7□□□□□ -0.54
CDK5RAP3-227ENST00000583352 TANGO6Q9C0B7 1094 aa11.7□□□□□ -0.54
CDK5RAP3-227ENST00000583352 SENP6Q9GZR1 1112 aaPredicted RBP11.7□□□□□ -0.54
CDK5RAP3-227ENST00000583352 HOXC10Q9NYD6 342 aa11.7□□□□□ -0.54
CDK5RAP3-227ENST00000583352 APBB1O00213 710 aa11.69□□□□□ -0.54
CDK5RAP3-227ENST00000583352 GOLIM4O00461 696 aa11.69□□□□□ -0.54
CDK5RAP3-227ENST00000583352 HMMRO75330 724 aa11.69□□□□□ -0.54
CDK5RAP3-227ENST00000583352 MDM2Q00987 491 aaPredicted RBP11.69□□□□□ -0.54
CDK5RAP3-227ENST00000583352 TMEM179Q6ZVK1 233 aa11.69□□□□□ -0.54
CDK5RAP3-227ENST00000583352 SIRT2Q8IXJ6 389 aa11.69□□□□□ -0.54
CDK5RAP3-227ENST00000583352 LCORLQ8N3X6 602 aa11.69□□□□□ -0.54
CDK5RAP3-227ENST00000583352 SHCBP1Q8NEM2 672 aa11.69□□□□□ -0.54
CDK5RAP3-227ENST00000583352 SDR42E1Q8WUS8 393 aa11.69□□□□□ -0.54
CDK5RAP3-227ENST00000583352 LPAR1Q92633 364 aa11.69□□□□□ -0.54
CDK5RAP3-227ENST00000583352 KIF1BPQ96EK5 621 aa11.69□□□□□ -0.54
CDK5RAP3-227ENST00000583352 MOV10L1Q9BXT6 1211 aaKnown RBP11.69□□□□□ -0.54
CDK5RAP3-227ENST00000583352 DCP1AQ9NPI6 582 aaPredicted RBP11.69□□□□□ -0.54
CDK5RAP3-227ENST00000583352 SWAP70Q9UH65 585 aa11.69□□□□□ -0.54
CDK5RAP3-227ENST00000583352 A0A1W2PRG0 241 aa11.68□□□□□ -0.54
CDK5RAP3-227ENST00000583352 DNM1LO00429 736 aa11.68□□□□□ -0.54
CDK5RAP3-227ENST00000583352 DLL1O00548 723 aa11.68□□□□□ -0.54
CDK5RAP3-227ENST00000583352 STRNO43815 780 aa11.68□□□□□ -0.54
CDK5RAP3-227ENST00000583352 CYBAP13498 195 aa11.68□□□□□ -0.54
CDK5RAP3-227ENST00000583352 PDE4AP27815 886 aa11.68□□□□□ -0.54
CDK5RAP3-227ENST00000583352 CYP2C19P33261 490 aa11.68□□□□□ -0.54
CDK5RAP3-227ENST00000583352 EVX2Q03828 476 aa11.68□□□□□ -0.54
CDK5RAP3-227ENST00000583352 OLFML2BQ68BL8 750 aa11.68□□□□□ -0.54
CDK5RAP3-227ENST00000583352 Q7L0L9 218 aa11.68□□□□□ -0.54
CDK5RAP3-227ENST00000583352 RPAP2Q8IXW5 612 aaPredicted RBP11.68□□□□□ -0.54
CDK5RAP3-227ENST00000583352 MB21D1Q8N884 522 aa11.68□□□□□ -0.54
CDK5RAP3-227ENST00000583352 LBHD1Q9BQE6 289 aaPredicted RBP11.68□□□□□ -0.54
CDK5RAP3-227ENST00000583352 BACH2Q9BYV9 841 aa11.68□□□□□ -0.54
CDK5RAP3-227ENST00000583352 SPATC1LQ9H0A9 340 aa11.68□□□□□ -0.54
CDK5RAP3-227ENST00000583352 SH2D4AQ9H788 454 aa11.68□□□□□ -0.54
CDK5RAP3-227ENST00000583352 ARHGEF10LQ9HCE6 1279 aa11.68□□□□□ -0.54
CDK5RAP3-227ENST00000583352 SLC5A4Q9NY91 659 aa11.68□□□□□ -0.54
CDK5RAP3-227ENST00000583352 PRKAG2Q9UGJ0 569 aa11.68□□□□□ -0.54
CDK5RAP3-227ENST00000583352 ZNF236Q9UL36 1845 aa11.67□□□□□ -0.54
CDK5RAP3-227ENST00000583352 TCRBV5S4A2TA0A5A2 114 aa11.67□□□□□ -0.54
CDK5RAP3-227ENST00000583352 CYP2D6P10635 497 aa11.67□□□□□ -0.54
CDK5RAP3-227ENST00000583352 ERCC3P19447 782 aa11.67□□□□□ -0.54
CDK5RAP3-227ENST00000583352 ADORA2AP29274 412 aa11.67□□□□□ -0.54
CDK5RAP3-227ENST00000583352 DSG3P32926 999 aa11.67□□□□□ -0.54
CDK5RAP3-227ENST00000583352 ATN1P54259 1190 aaPredicted RBP11.67□□□□□ -0.54
CDK5RAP3-227ENST00000583352 PLS1Q14651 629 aa11.67□□□□□ -0.54
CDK5RAP3-227ENST00000583352 AMOTL1Q8IY63 956 aa11.67□□□□□ -0.54
CDK5RAP3-227ENST00000583352 SLC44A5Q8NCS7 719 aa11.67□□□□□ -0.54
CDK5RAP3-227ENST00000583352 ARRDC4Q8NCT1 418 aa11.67□□□□□ -0.54
CDK5RAP3-227ENST00000583352 TRPV1Q8NER1 839 aa11.67□□□□□ -0.54
CDK5RAP3-227ENST00000583352 BCL11AQ9H165 835 aa11.67□□□□□ -0.54
CDK5RAP3-227ENST00000583352 MROH8Q9H579 483 aa11.67□□□□□ -0.54
CDK5RAP3-227ENST00000583352 ARMT1Q9H993 441 aa11.67□□□□□ -0.54
CDK5RAP3-227ENST00000583352 MTMR10Q9NXD2 777 aa11.67□□□□□ -0.54
CDK5RAP3-227ENST00000583352 STXBP5LQ9Y2K9 1186 aa11.67□□□□□ -0.54
CDK5RAP3-227ENST00000583352 A0A0G2JMZ2 1700 aa11.66□□□□□ -0.54
CDK5RAP3-227ENST00000583352 KBTBD13C9JR72 458 aa11.66□□□□□ -0.54
CDK5RAP3-227ENST00000583352 RAB11FIP3O75154 756 aa11.66□□□□□ -0.54
CDK5RAP3-227ENST00000583352 FLOT1O75955 427 aa11.66□□□□□ -0.54
CDK5RAP3-227ENST00000583352 MBD4O95243 580 aa11.66□□□□□ -0.54
CDK5RAP3-227ENST00000583352 IGHA2P01877 340 aa11.66□□□□□ -0.54
CDK5RAP3-227ENST00000583352 AKR1B1P15121 316 aa11.66□□□□□ -0.54
CDK5RAP3-227ENST00000583352 RTP1P59025 263 aa11.66□□□□□ -0.54
CDK5RAP3-227ENST00000583352 ICA1Q05084 483 aa11.66□□□□□ -0.54
CDK5RAP3-227ENST00000583352 NCAPG2Q86XI2 1143 aa11.66□□□□□ -0.54
CDK5RAP3-227ENST00000583352 DYNLL2Q96FJ2 89 aa11.66□□□□□ -0.54
CDK5RAP3-227ENST00000583352 CCDC17Q96LX7 622 aa11.66□□□□□ -0.54
CDK5RAP3-227ENST00000583352 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.66□□□□□ -0.549e-14■■□□□ 12.5
CDK5RAP3-227ENST00000583352 ATP8A2Q9NTI2 1148 aa11.66□□□□□ -0.54
CDK5RAP3-227ENST00000583352 PAG1Q9NWQ8 432 aa11.66□□□□□ -0.54
CDK5RAP3-227ENST00000583352 MYH8P13535 1937 aa11.66□□□□□ -0.54
CDK5RAP3-227ENST00000583352 WDR46O15213 610 aaKnown RBP11.65□□□□□ -0.54
CDK5RAP3-227ENST00000583352 SEPT4O43236 478 aa11.65□□□□□ -0.54
CDK5RAP3-227ENST00000583352 PRKAB2O43741 272 aa11.65□□□□□ -0.54
CDK5RAP3-227ENST00000583352 COBLO75128 1261 aa11.65□□□□□ -0.54
CDK5RAP3-227ENST00000583352 ADD2P35612 726 aa11.65□□□□□ -0.54
CDK5RAP3-227ENST00000583352 KIAA1755Q5JYT7 1200 aa11.65□□□□□ -0.54
CDK5RAP3-227ENST00000583352 GJC2Q5T442 439 aaPredicted RBP11.65□□□□□ -0.54
CDK5RAP3-227ENST00000583352 SAMD1Q6SPF0 538 aaPredicted RBP11.65□□□□□ -0.54
CDK5RAP3-227ENST00000583352 ABRAQ8N0Z2 381 aa11.65□□□□□ -0.54
CDK5RAP3-227ENST00000583352 SPICE1Q8N0Z3 855 aa11.65□□□□□ -0.54
CDK5RAP3-227ENST00000583352 ATG4CQ96DT6 458 aa11.65□□□□□ -0.54
CDK5RAP3-227ENST00000583352 DDRGK1Q96HY6 314 aa11.65□□□□□ -0.54
CDK5RAP3-227ENST00000583352 BOLA2Q9H3K6 86 aa11.65□□□□□ -0.54
CDK5RAP3-227ENST00000583352 VCPKMTQ9H867 229 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms