RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 POLR2DO15514 142 aaKnown RBP6.56□□□□□ -1.36
RTTN-209ENST00000583043 HSPA2P54652 639 aa6.56□□□□□ -1.36
RTTN-209ENST00000583043 HDXQ7Z353 690 aa6.56□□□□□ -1.36
RTTN-209ENST00000583043 VSTM4Q8IW00 320 aa6.56□□□□□ -1.36
RTTN-209ENST00000583043 CCDC144CPQ8IYA2 1237 aa6.56□□□□□ -1.36
RTTN-209ENST00000583043 ARFGAP2Q8N6H7 521 aa6.56□□□□□ -1.36
RTTN-209ENST00000583043 MIGA1Q8NAN2 632 aa6.56□□□□□ -1.36
RTTN-209ENST00000583043 NAP1L3Q99457 506 aaPredicted RBP6.56□□□□□ -1.36
RTTN-209ENST00000583043 EDEM3Q9BZQ6 932 aa6.56□□□□□ -1.36
RTTN-209ENST00000583043 RWDD2AQ9UIY3 292 aa6.56□□□□□ -1.36
RTTN-209ENST00000583043 ZSCAN29Q8IWY8 852 aaPredicted RBP6.56□□□□□ -1.36
RTTN-209ENST00000583043 NEK11Q8NG66 645 aa6.56□□□□□ -1.36
RTTN-209ENST00000583043 EDC3Q96F86 508 aaKnown RBP6.56□□□□□ -1.36
RTTN-209ENST00000583043 TRMT1Q9NXH9 659 aaKnown RBP6.56□□□□□ -1.36
RTTN-209ENST00000583043 PRAMEF22A3QJZ6 481 aa6.56□□□□□ -1.36
RTTN-209ENST00000583043 MCAMP43121 646 aa6.56□□□□□ -1.36
RTTN-209ENST00000583043 NDUFA8P51970 172 aa6.56□□□□□ -1.36
RTTN-209ENST00000583043 REXO1Q8N1G1 1221 aaKnown RBP6.56□□□□□ -1.36
RTTN-209ENST00000583043 TBC1D5Q92609 795 aa6.56□□□□□ -1.36
RTTN-209ENST00000583043 IWS1Q96ST2 819 aa6.56□□□□□ -1.36
RTTN-209ENST00000583043 THAP9Q9H5L6 903 aa6.56□□□□□ -1.36
RTTN-209ENST00000583043 TUBE1Q9UJT0 475 aa6.56□□□□□ -1.36
RTTN-209ENST00000583043 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.56□□□□□ -1.36
RTTN-209ENST00000583043 GOLGA6L10A0A0M3HER8 536 aa6.56□□□□□ -1.36
RTTN-209ENST00000583043 ADORA1P30542 326 aa6.56□□□□□ -1.36
RTTN-209ENST00000583043 APBA1Q02410 837 aa6.56□□□□□ -1.36
RTTN-209ENST00000583043 CHST3Q7LGC8 479 aa6.56□□□□□ -1.36
RTTN-209ENST00000583043 NLGN1Q8N2Q7 840 aa6.56□□□□□ -1.36
RTTN-209ENST00000583043 HELBQ8NG08 1087 aaPredicted RBP6.56□□□□□ -1.36
RTTN-209ENST00000583043 PUS7LQ9H0K6 701 aaKnown RBP6.56□□□□□ -1.36
RTTN-209ENST00000583043 DHX36Q9H2U1 1008 aaKnown RBP6.56□□□□□ -1.36
RTTN-209ENST00000583043 MRC1P22897 1456 aa6.56□□□□□ -1.36
RTTN-209ENST00000583043 MEGF6O75095 1541 aa6.56□□□□□ -1.36
RTTN-209ENST00000583043 SPDYE3A6NKU9 549 aa6.56□□□□□ -1.36
RTTN-209ENST00000583043 RAD21O60216 631 aa6.56□□□□□ -1.36
RTTN-209ENST00000583043 AFMP43652 599 aa6.56□□□□□ -1.36
RTTN-209ENST00000583043 UBXN1Q04323 297 aa6.56□□□□□ -1.36
RTTN-209ENST00000583043 OR8K1Q8NGG5 319 aa6.56□□□□□ -1.36
RTTN-209ENST00000583043 RABGGTAQ92696 567 aa6.56□□□□□ -1.36
RTTN-209ENST00000583043 FAM184BQ9ULE4 1060 aa6.56□□□□□ -1.36
RTTN-209ENST00000583043 ZNF142P52746 1687 aaPredicted RBP6.56□□□□□ -1.36
RTTN-209ENST00000583043 SHTN1A0MZ66 631 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 RIOK3O14730 519 aaKnown RBP6.55□□□□□ -1.36
RTTN-209ENST00000583043 POLR3GO15318 223 aaPredicted RBP6.55□□□□□ -1.36
RTTN-209ENST00000583043 GRAPQ13588 217 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 TTLL5Q6EMB2 1281 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 TMTC3Q6ZXV5 915 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 NEK8Q86SG6 692 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 GRAPLQ8TC17 118 aaPredicted RBP6.55□□□□□ -1.36
RTTN-209ENST00000583043 STMN4Q9H169 189 aaPredicted RBP6.55□□□□□ -1.36
RTTN-209ENST00000583043 METTL14Q9HCE5 456 aaKnown RBP6.55□□□□□ -1.36
RTTN-209ENST00000583043 RGPD1P0DJD0 1748 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 LRRC37A3O60309 1634 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 VWA3AA6NCI4 1184 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 CALUO43852 315 aaPredicted RBP6.55□□□□□ -1.36
RTTN-209ENST00000583043 OR52Z1P0C646 297 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 ADD1P35611 737 aaKnown RBP6.55□□□□□ -1.36
RTTN-209ENST00000583043 RASGRF1Q13972 1273 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 SLC10A5Q5PT55 438 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 HS2ST1Q7LGA3 356 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 PIH1D3Q9NQM4 214 aaKnown RBP6.55□□□□□ -1.36
RTTN-209ENST00000583043 PARP3Q9Y6F1 533 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 USP17L12C9JPN9 530 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 USP17L21D6R901 530 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 TFAP4Q01664 338 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 CDC37Q16543 378 aaPredicted RBP6.55□□□□□ -1.36
RTTN-209ENST00000583043 ZNF658Q5TYW1 1059 aaPredicted RBP6.55□□□□□ -1.36
RTTN-209ENST00000583043 PPP4R3AQ6IN85 833 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 PPP1R2P3Q6NXS1 205 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 FAM173BQ6P4H8 233 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 PPP4R3CPQ6ZMV5 832 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 CCDC170Q8IYT3 715 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 CCDC82Q8N4S0 544 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 PNMA1Q8ND90 353 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 KAZALD1Q96I82 304 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 LRWD1Q9UFC0 647 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 SERTAD1Q9UHV2 236 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 BZW2Q9Y6E2 419 aaKnown RBP6.55□□□□□ -1.36
RTTN-209ENST00000583043 LMO7Q8WWI1 1683 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 SSBP05455 408 aaKnown RBP eCLIP6.55□□□□□ -1.36
RTTN-209ENST00000583043 RBM5P52756 815 aaKnown RBP eCLIP6.55□□□□□ -1.36
RTTN-209ENST00000583043 TNNC1P63316 161 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 CTDSPL2Q05D32 466 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 KCND1Q9NSA2 647 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 MPHOSPH10O00566 681 aaKnown RBP6.55□□□□□ -1.36
RTTN-209ENST00000583043 UFL1O94874 794 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 CLSTN1O94985 981 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 MCM7P33993 719 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 TNNI2P48788 182 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 ATP2B2Q01814 1243 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 ODF2Q5BJF6 829 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 PIK3AP1Q6ZUJ8 805 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 ARHGEF10LQ9HCE6 1279 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 USP54Q70EL1 1684 aa6.55□□□□□ -1.36
RTTN-209ENST00000583043 CETN3O15182 167 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 KIAA0754O94854 1291 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 KRT13P13646 458 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 IDEP14735 1019 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 ANXA13P27216 316 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 C10orf76Q5T2E6 689 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms