RNA–Protein interactions for RNA: ENST00000583013.1

KPNB1-213, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-213ENST00000583013 HOXA7P31268 230 aaPredicted RBP9.66□□□□□ -0.86
KPNB1-213ENST00000583013 TDO2P48775 406 aa9.66□□□□□ -0.86
KPNB1-213ENST00000583013 USP14P54578 494 aa9.66□□□□□ -0.86
KPNB1-213ENST00000583013 SEPT2Q15019 361 aa9.66□□□□□ -0.86
KPNB1-213ENST00000583013 IFNL3Q8IZI9 196 aa9.66□□□□□ -0.86
KPNB1-213ENST00000583013 SMCR8Q8TEV9 937 aaPredicted RBP9.66□□□□□ -0.86
KPNB1-213ENST00000583013 KIAA1683Q9H0B3 1180 aa9.66□□□□□ -0.86
KPNB1-213ENST00000583013 EFCC1Q9HA90 598 aa9.66□□□□□ -0.86
KPNB1-213ENST00000583013 EMILIN3Q9NT22 766 aa9.66□□□□□ -0.86
KPNB1-213ENST00000583013 A0A0G2JMZ2 1700 aa9.65□□□□□ -0.86
KPNB1-213ENST00000583013 ZMYM6O95789 1325 aa9.65□□□□□ -0.86
KPNB1-213ENST00000583013 MPHOSPH10O00566 681 aaKnown RBP9.65□□□□□ -0.86
KPNB1-213ENST00000583013 APPP05067 770 aa9.65□□□□□ -0.86
KPNB1-213ENST00000583013 GCLCP48506 637 aaPredicted RBP9.65□□□□□ -0.86
KPNB1-213ENST00000583013 NMIQ13287 307 aaPredicted RBP9.65□□□□□ -0.86
KPNB1-213ENST00000583013 KIF22Q14807 665 aa9.65□□□□□ -0.86
KPNB1-213ENST00000583013 FAM110CQ1W6H9 321 aa9.65□□□□□ -0.86
KPNB1-213ENST00000583013 MCMDC2Q4G0Z9 681 aa9.65□□□□□ -0.86
KPNB1-213ENST00000583013 TTC22Q5TAA0 569 aa9.65□□□□□ -0.86
KPNB1-213ENST00000583013 ACER1Q8TDN7 264 aa9.65□□□□□ -0.86
KPNB1-213ENST00000583013 BBXQ8WY36 941 aaPredicted RBP9.65□□□□□ -0.86
KPNB1-213ENST00000583013 RILPL2Q969X0 211 aa9.65□□□□□ -0.86
KPNB1-213ENST00000583013 FAM227BQ96M60 508 aa9.65□□□□□ -0.86
KPNB1-213ENST00000583013 FEZ1Q99689 392 aa9.65□□□□□ -0.86
KPNB1-213ENST00000583013 ARHGAP39Q9C0H5 1083 aa9.65□□□□□ -0.86
KPNB1-213ENST00000583013 NAPBQ9H115 298 aa9.65□□□□□ -0.86
KPNB1-213ENST00000583013 ASCC2Q9H1I8 757 aaPredicted RBP9.65□□□□□ -0.86
KPNB1-213ENST00000583013 RYDENQ9NUL5 291 aaKnown RBP9.65□□□□□ -0.86
KPNB1-213ENST00000583013 HPS5Q9UPZ3 1129 aa9.65□□□□□ -0.86
KPNB1-213ENST00000583013 PTPN22Q9Y2R2 807 aa9.65□□□□□ -0.86
KPNB1-213ENST00000583013 LAMA4Q16363 1823 aa9.65□□□□□ -0.86
KPNB1-213ENST00000583013 RBBP6Q7Z6E9 1792 aaKnown RBP9.65□□□□□ -0.87
KPNB1-213ENST00000583013 PLIN4Q96Q06 1357 aa9.64□□□□□ -0.87
KPNB1-213ENST00000583013 PARP14Q460N5 1801 aa9.64□□□□□ -0.87
KPNB1-213ENST00000583013 A0A1W2PRG0 241 aa9.64□□□□□ -0.87
KPNB1-213ENST00000583013 MINDY4BA8MYZ0 360 aa9.64□□□□□ -0.87
KPNB1-213ENST00000583013 HIP1O00291 1037 aa9.64□□□□□ -0.87
KPNB1-213ENST00000583013 SDSP20132 328 aa9.64□□□□□ -0.87
KPNB1-213ENST00000583013 RASA1P20936 1047 aa9.64□□□□□ -0.87
KPNB1-213ENST00000583013 CTGFP29279 349 aa9.64□□□□□ -0.87
KPNB1-213ENST00000583013 PRMT2P55345 433 aa9.64□□□□□ -0.87
KPNB1-213ENST00000583013 ICA1Q05084 483 aa9.64□□□□□ -0.87
KPNB1-213ENST00000583013 ALX1Q15699 326 aa9.64□□□□□ -0.87
KPNB1-213ENST00000583013 CCDC129Q6ZRS4 1044 aa9.64□□□□□ -0.87
KPNB1-213ENST00000583013 SIAH1Q8IUQ4 282 aa9.64□□□□□ -0.87
KPNB1-213ENST00000583013 GTF3C2Q8WUA4 911 aaPredicted RBP9.64□□□□□ -0.87
KPNB1-213ENST00000583013 SH2D4AQ9H788 454 aa9.64□□□□□ -0.87
KPNB1-213ENST00000583013 ZNF287Q9HBT7 754 aa9.64□□□□□ -0.87
KPNB1-213ENST00000583013 CCDC171Q6TFL3 1326 aa9.63□□□□□ -0.87
KPNB1-213ENST00000583013 RLFQ13129 1914 aa9.63□□□□□ -0.87
KPNB1-213ENST00000583013 USP17L15C9J2P7 530 aa9.63□□□□□ -0.87
KPNB1-213ENST00000583013 USP17L13C9JLJ4 530 aa9.63□□□□□ -0.87
KPNB1-213ENST00000583013 USP17L11C9JVI0 530 aa9.63□□□□□ -0.87
KPNB1-213ENST00000583013 USP17L18D6R9N7 530 aa9.63□□□□□ -0.87
KPNB1-213ENST00000583013 USP17L22D6RA61 530 aa9.63□□□□□ -0.87
KPNB1-213ENST00000583013 USP17L17D6RBQ6 530 aa9.63□□□□□ -0.87
KPNB1-213ENST00000583013 USP17L19D6RCP7 530 aa9.63□□□□□ -0.87
KPNB1-213ENST00000583013 USP17L20D6RJB6 530 aa9.63□□□□□ -0.87
KPNB1-213ENST00000583013 GTPBP6O43824 516 aaPredicted RBP9.63□□□□□ -0.87
KPNB1-213ENST00000583013 SLC3A2P08195 630 aaKnown RBP9.63□□□□□ -0.87
KPNB1-213ENST00000583013 GSPT1P15170 499 aaKnown RBP9.63□□□□□ -0.87
KPNB1-213ENST00000583013 VCAM1P19320 739 aa9.63□□□□□ -0.87
KPNB1-213ENST00000583013 PSMC4P43686 418 aa9.63□□□□□ -0.87
KPNB1-213ENST00000583013 MFAP1P55081 439 aaKnown RBP9.63□□□□□ -0.87
KPNB1-213ENST00000583013 HERVK_113P62684 666 aa9.63□□□□□ -0.87
KPNB1-213ENST00000583013 IRX3P78415 501 aaPredicted RBP9.63□□□□□ -0.87
KPNB1-213ENST00000583013 PPARAQ07869 468 aa9.63□□□□□ -0.87
KPNB1-213ENST00000583013 USP17L24Q0WX57 530 aa9.63□□□□□ -0.87
KPNB1-213ENST00000583013 ZYXQ15942 572 aaKnown RBP9.63□□□□□ -0.87
KPNB1-213ENST00000583013 VPS53Q5VIR6 699 aa9.63□□□□□ -0.87
KPNB1-213ENST00000583013 ZNF589Q86UQ0 364 aaPredicted RBP9.63□□□□□ -0.87
KPNB1-213ENST00000583013 ANKRD13CQ8N6S4 541 aa9.63□□□□□ -0.87
KPNB1-213ENST00000583013 LPAR1Q92633 364 aa9.63□□□□□ -0.87
KPNB1-213ENST00000583013 TRIM47Q96LD4 638 aa9.63□□□□□ -0.87
KPNB1-213ENST00000583013 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.63□□□□□ -0.87
KPNB1-213ENST00000583013 KANSL2Q9H9L4 492 aa9.63□□□□□ -0.87
KPNB1-213ENST00000583013 MKNK2Q9HBH9 465 aa9.63□□□□□ -0.87
KPNB1-213ENST00000583013 ARHGEF10LQ9HCE6 1279 aa9.63□□□□□ -0.87
KPNB1-213ENST00000583013 MORF4L1Q9UBU8 362 aa9.63□□□□□ -0.87
KPNB1-213ENST00000583013 ANAPC4Q9UJX5 808 aa9.63□□□□□ -0.87
KPNB1-213ENST00000583013 TMX2Q9Y320 296 aa9.63□□□□□ -0.87
KPNB1-213ENST00000583013 MYH4Q9Y623 1939 aa9.62□□□□□ -0.87
KPNB1-213ENST00000583013 BRCA2P51587 3418 aa9.62□□□□□ -0.87
KPNB1-213ENST00000583013 IGKV6D-41A0A0C4DH26 115 aa9.62□□□□□ -0.87
KPNB1-213ENST00000583013 CCDC85CA6NKD9 419 aa9.62□□□□□ -0.87
KPNB1-213ENST00000583013 HSPD1P10809 573 aaKnown RBP9.62□□□□□ -0.87
KPNB1-213ENST00000583013 EEF2P13639 858 aaKnown RBP9.62□□□□□ -0.87
KPNB1-213ENST00000583013 FCGRTP55899 365 aa9.62□□□□□ -0.87
KPNB1-213ENST00000583013 PDE4BQ07343 736 aa9.62□□□□□ -0.87
KPNB1-213ENST00000583013 LBX2Q6XYB7 198 aa9.62□□□□□ -0.87
KPNB1-213ENST00000583013 CATSPERGQ6ZRH7 1159 aa9.62□□□□□ -0.87
KPNB1-213ENST00000583013 CENPQQ7L2Z9 268 aaPredicted RBP9.62□□□□□ -0.87
KPNB1-213ENST00000583013 CLEC10AQ8IUN9 316 aa9.62□□□□□ -0.87
KPNB1-213ENST00000583013 ARMC5Q96C12 935 aa9.62□□□□□ -0.87
KPNB1-213ENST00000583013 P2RX7Q99572 595 aaKnown RBP9.62□□□□□ -0.87
KPNB1-213ENST00000583013 VCPKMTQ9H867 229 aa9.62□□□□□ -0.87
KPNB1-213ENST00000583013 DIAPH3Q9NSV4 1193 aa9.62□□□□□ -0.87
KPNB1-213ENST00000583013 SRRDQ9UH36 339 aa9.62□□□□□ -0.87
KPNB1-213ENST00000583013 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.62□□□□□ -0.87
KPNB1-213ENST00000583013 PTCH2Q9Y6C5 1203 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms