RNA–Protein interactions for RNA: ENST00000582629.1

ITGB4-208, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-208ENST00000582629 ZMYND8Q9ULU4 1186 aaPredicted RBP17.46■□□□□ 0.39
ITGB4-208ENST00000582629 RLFQ13129 1914 aa17.46■□□□□ 0.39
ITGB4-208ENST00000582629 PFASO15067 1338 aa17.46■□□□□ 0.38
ITGB4-208ENST00000582629 ZNF236Q9UL36 1845 aa17.45■□□□□ 0.38
ITGB4-208ENST00000582629 HOXC6P09630 235 aa17.45■□□□□ 0.38
ITGB4-208ENST00000582629 COL6A1P12109 1028 aa17.45■□□□□ 0.38
ITGB4-208ENST00000582629 BMP8BP34820 402 aa17.45■□□□□ 0.38
ITGB4-208ENST00000582629 COG2Q14746 738 aa17.45■□□□□ 0.38
ITGB4-208ENST00000582629 AMOTL1Q8IY63 956 aa17.45■□□□□ 0.38
ITGB4-208ENST00000582629 SLC44A5Q8NCS7 719 aa17.45■□□□□ 0.38
ITGB4-208ENST00000582629 HAUS7Q99871 368 aa17.45■□□□□ 0.38
ITGB4-208ENST00000582629 FLRT1Q9NZU1 646 aa17.45■□□□□ 0.38
ITGB4-208ENST00000582629 RCAN3Q9UKA8 241 aa17.45■□□□□ 0.38
ITGB4-208ENST00000582629 PRKAB2O43741 272 aa17.44■□□□□ 0.38
ITGB4-208ENST00000582629 UBE3CQ15386 1083 aa17.44■□□□□ 0.38
ITGB4-208ENST00000582629 LPAR1Q92633 364 aa17.44■□□□□ 0.38
ITGB4-208ENST00000582629 DYNLL2Q96FJ2 89 aa17.44■□□□□ 0.38
ITGB4-208ENST00000582629 TANGO6Q9C0B7 1094 aa17.44■□□□□ 0.38
ITGB4-208ENST00000582629 SH2D4AQ9H788 454 aa17.44■□□□□ 0.38
ITGB4-208ENST00000582629 ARHGEF10LQ9HCE6 1279 aa17.44■□□□□ 0.38
ITGB4-208ENST00000582629 LAMA3Q16787 3333 aa17.43■□□□□ 0.38
ITGB4-208ENST00000582629 ATP2B2Q01814 1243 aa17.43■□□□□ 0.38
ITGB4-208ENST00000582629 ICA1Q05084 483 aa17.43■□□□□ 0.38
ITGB4-208ENST00000582629 SLFNL1Q499Z3 407 aa17.43■□□□□ 0.38
ITGB4-208ENST00000582629 SHCBP1Q8NEM2 672 aa17.43■□□□□ 0.38
ITGB4-208ENST00000582629 DDRGK1Q96HY6 314 aa17.43■□□□□ 0.38
ITGB4-208ENST00000582629 CCDC17Q96LX7 622 aa17.43■□□□□ 0.38
ITGB4-208ENST00000582629 MOV10L1Q9BXT6 1211 aaKnown RBP17.43■□□□□ 0.38
ITGB4-208ENST00000582629 LRRCC1Q9C099 1032 aa17.43■□□□□ 0.38
ITGB4-208ENST00000582629 PARP14Q460N5 1801 aa17.42■□□□□ 0.38
ITGB4-208ENST00000582629 MSCO60682 206 aa17.42■□□□□ 0.38
ITGB4-208ENST00000582629 AKR1B1P15121 316 aa17.42■□□□□ 0.38
ITGB4-208ENST00000582629 SYN1P17600 705 aa17.42■□□□□ 0.38
ITGB4-208ENST00000582629 C12orf60Q5U649 245 aa17.42■□□□□ 0.38
ITGB4-208ENST00000582629 ZSCAN25Q6NSZ9 544 aa17.42■□□□□ 0.38
ITGB4-208ENST00000582629 MB21D1Q8N884 522 aa17.42■□□□□ 0.38
ITGB4-208ENST00000582629 NPLOC4Q8TAT6 608 aa17.42■□□□□ 0.38
ITGB4-208ENST00000582629 SPATC1LQ9H0A9 340 aa17.42■□□□□ 0.38
ITGB4-208ENST00000582629 DDX20Q9UHI6 824 aaKnown RBP17.42■□□□□ 0.38
ITGB4-208ENST00000582629 TMX2Q9Y320 296 aa17.42■□□□□ 0.38
ITGB4-208ENST00000582629 SOX1O00570 391 aaPredicted RBP17.41■□□□□ 0.38
ITGB4-208ENST00000582629 STRNO43815 780 aa17.41■□□□□ 0.38
ITGB4-208ENST00000582629 DSG3P32926 999 aa17.41■□□□□ 0.38
ITGB4-208ENST00000582629 CDK8P49336 464 aa17.41■□□□□ 0.38
ITGB4-208ENST00000582629 KIAA1755Q5JYT7 1200 aa17.41■□□□□ 0.38
ITGB4-208ENST00000582629 DPP9Q86TI2 863 aa17.41■□□□□ 0.38
ITGB4-208ENST00000582629 VCPKMTQ9H867 229 aa17.41■□□□□ 0.38
ITGB4-208ENST00000582629 USP17L12C9JPN9 530 aa17.4■□□□□ 0.38
ITGB4-208ENST00000582629 USP17L21D6R901 530 aa17.4■□□□□ 0.38
ITGB4-208ENST00000582629 WDR46O15213 610 aaKnown RBP17.4■□□□□ 0.38
ITGB4-208ENST00000582629 FLOT1O75955 427 aa17.4■□□□□ 0.38
ITGB4-208ENST00000582629 IGHA2P01877 340 aa17.4■□□□□ 0.38
ITGB4-208ENST00000582629 CHGBP05060 677 aa17.4■□□□□ 0.38
ITGB4-208ENST00000582629 ERCC3P19447 782 aa17.4■□□□□ 0.38
ITGB4-208ENST00000582629 ADORA2AP29274 412 aa17.4■□□□□ 0.38
ITGB4-208ENST00000582629 CNGA1P29973 690 aa17.4■□□□□ 0.38
ITGB4-208ENST00000582629 CYP2C19P33261 490 aa17.4■□□□□ 0.38
ITGB4-208ENST00000582629 MAGEA10P43363 369 aaPredicted RBP17.4■□□□□ 0.38
ITGB4-208ENST00000582629 OLFML2BQ68BL8 750 aa17.4■□□□□ 0.38
ITGB4-208ENST00000582629 C16orf86Q6ZW13 317 aa17.4■□□□□ 0.38
ITGB4-208ENST00000582629 CLEC10AQ8IUN9 316 aa17.4■□□□□ 0.38
ITGB4-208ENST00000582629 SIAH1Q8IUQ4 282 aa17.4■□□□□ 0.38
ITGB4-208ENST00000582629 SLC4A4Q9Y6R1 1079 aa17.4■□□□□ 0.38
ITGB4-208ENST00000582629 CYP2D7A0A087X1C5 515 aa17.39■□□□□ 0.37
ITGB4-208ENST00000582629 LRRC26Q2I0M4 334 aa17.39■□□□□ 0.37
ITGB4-208ENST00000582629 SPICE1Q8N0Z3 855 aa17.39■□□□□ 0.37
ITGB4-208ENST00000582629 LRCH3Q96II8 777 aa17.39■□□□□ 0.37
ITGB4-208ENST00000582629 MROH8Q9H579 483 aa17.39■□□□□ 0.37
ITGB4-208ENST00000582629 SLC5A4Q9NY91 659 aa17.39■□□□□ 0.37
ITGB4-208ENST00000582629 COL11A1P12107 1806 aaPredicted RBP17.38■□□□□ 0.37
ITGB4-208ENST00000582629 SMARCA5O60264 1052 aaPredicted RBP17.38■□□□□ 0.37
ITGB4-208ENST00000582629 CYBAP13498 195 aa17.38■□□□□ 0.37
ITGB4-208ENST00000582629 PLS1Q14651 629 aa17.38■□□□□ 0.37
ITGB4-208ENST00000582629 C20orf194Q5TEA3 1177 aa17.38■□□□□ 0.37
ITGB4-208ENST00000582629 NCAPG2Q86XI2 1143 aa17.38■□□□□ 0.37
ITGB4-208ENST00000582629 TDHQ8IZJ6 230 aa17.38■□□□□ 0.37
ITGB4-208ENST00000582629 ATG4CQ96DT6 458 aa17.38■□□□□ 0.37
ITGB4-208ENST00000582629 PUS7LQ9H0K6 701 aaKnown RBP17.38■□□□□ 0.37
ITGB4-208ENST00000582629 KANSL2Q9H9L4 492 aa17.38■□□□□ 0.37
ITGB4-208ENST00000582629 ARPP21Q9UBL0 812 aaPredicted RBP17.38■□□□□ 0.37
ITGB4-208ENST00000582629 ZNFX1Q9P2E3 1918 aaKnown RBP17.38■□□□□ 0.37
ITGB4-208ENST00000582629 GREB1LQ9C091 1923 aaPredicted RBP17.37■□□□□ 0.37
ITGB4-208ENST00000582629 SMIM22K7EJ46 135 aa17.37■□□□□ 0.37
ITGB4-208ENST00000582629 DNM1LO00429 736 aa17.37■□□□□ 0.37
ITGB4-208ENST00000582629 EEF2P13639 858 aaKnown RBP17.37■□□□□ 0.37
ITGB4-208ENST00000582629 GPR153Q6NV75 609 aa17.37■□□□□ 0.37
ITGB4-208ENST00000582629 CTR9Q6PD62 1173 aa17.37■□□□□ 0.37
ITGB4-208ENST00000582629 ABRAQ8N0Z2 381 aa17.37■□□□□ 0.37
ITGB4-208ENST00000582629 TRPV1Q8NER1 839 aa17.37■□□□□ 0.37
ITGB4-208ENST00000582629 UBE2OQ9C0C9 1292 aaKnown RBP17.37■□□□□ 0.37
ITGB4-208ENST00000582629 SENP6Q9GZR1 1112 aaPredicted RBP17.37■□□□□ 0.37
ITGB4-208ENST00000582629 ECHDC1Q9NTX5 307 aa17.37■□□□□ 0.37
ITGB4-208ENST00000582629 COBLO75128 1261 aa17.36■□□□□ 0.37
ITGB4-208ENST00000582629 SLC25A27O95847 323 aa17.36■□□□□ 0.37
ITGB4-208ENST00000582629 LRIT3Q3SXY7 679 aa17.36■□□□□ 0.37
ITGB4-208ENST00000582629 GOPCQ9HD26 462 aa17.36■□□□□ 0.37
ITGB4-208ENST00000582629 TMEM132BQ14DG7 1078 aa17.35■□□□□ 0.37
ITGB4-208ENST00000582629 SAMD1Q6SPF0 538 aaPredicted RBP17.35■□□□□ 0.37
ITGB4-208ENST00000582629 ARRDC4Q8NCT1 418 aa17.35■□□□□ 0.37
ITGB4-208ENST00000582629 GPATCH3Q96I76 525 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms