RNA–Protein interactions for RNA: ENST00000582475.1

SNRPD1-204, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 3 BASIC

Gene SNRPD1, Length 723 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-204ENST00000582475 USP17L2Q6R6M4 530 aa14.24□□□□□ -0.13
SNRPD1-204ENST00000582475 ARHGEF10LQ9HCE6 1279 aa14.24□□□□□ -0.13
SNRPD1-204ENST00000582475 RNF186Q9NXI6 227 aa14.24□□□□□ -0.13
SNRPD1-204ENST00000582475 TMOD4Q9NZQ9 345 aa14.24□□□□□ -0.13
SNRPD1-204ENST00000582475 DOCK1Q14185 1865 aa14.23□□□□□ -0.13
SNRPD1-204ENST00000582475 IGKV6D-41A0A0C4DH26 115 aa14.23□□□□□ -0.13
SNRPD1-204ENST00000582475 SLC27A2O14975 620 aa14.23□□□□□ -0.13
SNRPD1-204ENST00000582475 TRPA1O75762 1119 aa14.23□□□□□ -0.13
SNRPD1-204ENST00000582475 REC8O95072 547 aa14.23□□□□□ -0.13
SNRPD1-204ENST00000582475 ALDH1A1P00352 501 aa14.23□□□□□ -0.13
SNRPD1-204ENST00000582475 NT5C2P49902 561 aa14.23□□□□□ -0.13
SNRPD1-204ENST00000582475 USP14P54578 494 aa14.23□□□□□ -0.13
SNRPD1-204ENST00000582475 CREB3L3Q68CJ9 461 aa14.23□□□□□ -0.13
SNRPD1-204ENST00000582475 GPAT2Q6NUI2 795 aa14.23□□□□□ -0.13
SNRPD1-204ENST00000582475 ANKRD23Q86SG2 305 aa14.23□□□□□ -0.13
SNRPD1-204ENST00000582475 CLEC10AQ8IUN9 316 aa14.23□□□□□ -0.13
SNRPD1-204ENST00000582475 FAM43AQ8N2R8 423 aa14.23□□□□□ -0.13
SNRPD1-204ENST00000582475 ESR2Q92731 530 aa14.23□□□□□ -0.13
SNRPD1-204ENST00000582475 FEZ1Q99689 392 aa14.23□□□□□ -0.13
SNRPD1-204ENST00000582475 KRT23Q9C075 422 aa14.23□□□□□ -0.13
SNRPD1-204ENST00000582475 EMILIN3Q9NT22 766 aa14.23□□□□□ -0.13
SNRPD1-204ENST00000582475 MTMR4Q9NYA4 1195 aa14.23□□□□□ -0.13
SNRPD1-204ENST00000582475 NYAP2Q9P242 653 aa14.23□□□□□ -0.13
SNRPD1-204ENST00000582475 CLIP2Q9UDT6 1046 aa14.23□□□□□ -0.13
SNRPD1-204ENST00000582475 B4E1Z4 1266 aa14.22□□□□□ -0.13
SNRPD1-204ENST00000582475 E7EWF7 191 aa14.22□□□□□ -0.13
SNRPD1-204ENST00000582475 TRDNQ13061 729 aa14.22□□□□□ -0.13
SNRPD1-204ENST00000582475 DGKZQ13574 1117 aa14.22□□□□□ -0.13
SNRPD1-204ENST00000582475 ZYXQ15942 572 aaKnown RBP14.22□□□□□ -0.13
SNRPD1-204ENST00000582475 PROCA1Q8NCQ7 364 aaPredicted RBP14.22□□□□□ -0.13
SNRPD1-204ENST00000582475 NKX2-3Q8TAU0 364 aa14.22□□□□□ -0.13
SNRPD1-204ENST00000582475 MKL1Q969V6 931 aa14.22□□□□□ -0.13
SNRPD1-204ENST00000582475 CEP95Q96GE4 821 aa14.22□□□□□ -0.13
SNRPD1-204ENST00000582475 KIAA1683Q9H0B3 1180 aa14.22□□□□□ -0.13
SNRPD1-204ENST00000582475 CNNM2Q9H8M5 875 aa14.22□□□□□ -0.13
SNRPD1-204ENST00000582475 IL17RBQ9NRM6 502 aa14.22□□□□□ -0.13
SNRPD1-204ENST00000582475 TCP11L1Q9NUJ3 509 aa14.22□□□□□ -0.13
SNRPD1-204ENST00000582475 ZSWIM5Q9P217 1185 aa14.22□□□□□ -0.13
SNRPD1-204ENST00000582475 TMX2Q9Y320 296 aa14.22□□□□□ -0.13
SNRPD1-204ENST00000582475 NEDD4P46934 1319 aa14.21□□□□□ -0.13
SNRPD1-204ENST00000582475 ATAD5Q96QE3 1844 aa14.21□□□□□ -0.13
SNRPD1-204ENST00000582475 PDHXO00330 501 aa14.21□□□□□ -0.13
SNRPD1-204ENST00000582475 KDM4AO75164 1064 aa14.21□□□□□ -0.13
SNRPD1-204ENST00000582475 TTLL1O95922 423 aa14.21□□□□□ -0.13
SNRPD1-204ENST00000582475 HSPA1AP0DMV8 641 aaKnown RBP14.21□□□□□ -0.13
SNRPD1-204ENST00000582475 HSPA1BP0DMV9 641 aaKnown RBP14.21□□□□□ -0.13
SNRPD1-204ENST00000582475 PPP4R3BQ5MIZ7 849 aa14.21□□□□□ -0.13
SNRPD1-204ENST00000582475 RNF20Q5VTR2 975 aa14.21□□□□□ -0.13
SNRPD1-204ENST00000582475 C12orf42Q96LP6 360 aa14.21□□□□□ -0.13
SNRPD1-204ENST00000582475 SH2D4AQ9H788 454 aa14.21□□□□□ -0.13
SNRPD1-204ENST00000582475 ZCCHC17Q9NP64 241 aaKnown RBP14.21□□□□□ -0.13
SNRPD1-204ENST00000582475 TAF6LQ9Y6J9 622 aa14.21□□□□□ -0.13
SNRPD1-204ENST00000582475 PHIPQ8WWQ0 1821 aa14.2□□□□□ -0.14
SNRPD1-204ENST00000582475 LAMB1P07942 1786 aa14.2□□□□□ -0.14
SNRPD1-204ENST00000582475 MYH8P13535 1937 aa14.2□□□□□ -0.14
SNRPD1-204ENST00000582475 EPB41L2O43491 1005 aaKnown RBP14.2□□□□□ -0.14
SNRPD1-204ENST00000582475 CA12O43570 354 aa14.2□□□□□ -0.14
SNRPD1-204ENST00000582475 NMT2O60551 498 aa14.2□□□□□ -0.14
SNRPD1-204ENST00000582475 EIF5BO60841 1220 aaKnown RBP14.2□□□□□ -0.14
SNRPD1-204ENST00000582475 TBC1D8O95759 1140 aa14.2□□□□□ -0.14
SNRPD1-204ENST00000582475 CCDC178Q5BJE1 867 aa14.2□□□□□ -0.14
SNRPD1-204ENST00000582475 TREML2Q5T2D2 321 aa14.2□□□□□ -0.14
SNRPD1-204ENST00000582475 STOX1Q6ZVD7 989 aa14.2□□□□□ -0.14
SNRPD1-204ENST00000582475 NCOA7Q8NI08 942 aa14.2□□□□□ -0.14
SNRPD1-204ENST00000582475 USP26Q9BXU7 913 aa14.2□□□□□ -0.14
SNRPD1-204ENST00000582475 VCPKMTQ9H867 229 aa14.2□□□□□ -0.14
SNRPD1-204ENST00000582475 ZFYVE28Q9HCC9 887 aa14.2□□□□□ -0.14
SNRPD1-204ENST00000582475 SAGE1Q9NXZ1 904 aa14.2□□□□□ -0.14
SNRPD1-204ENST00000582475 AGTPBP1Q9UPW5 1226 aa14.2□□□□□ -0.14
SNRPD1-204ENST00000582475 PLIN4Q96Q06 1357 aa14.2□□□□□ -0.14
SNRPD1-204ENST00000582475 OSBPP22059 807 aa14.19□□□□□ -0.14
SNRPD1-204ENST00000582475 HOXA7P31268 230 aaPredicted RBP14.19□□□□□ -0.14
SNRPD1-204ENST00000582475 NOVP48745 357 aa14.19□□□□□ -0.14
SNRPD1-204ENST00000582475 PABPC4Q13310 644 aaKnown RBP eCLIP14.19□□□□□ -0.142e-21■■■■□ 21.1
SNRPD1-204ENST00000582475 TAF1CQ15572 869 aaPredicted RBP14.19□□□□□ -0.14
SNRPD1-204ENST00000582475 TSGA10IPQ3SY00 556 aa14.19□□□□□ -0.14
SNRPD1-204ENST00000582475 RALYLQ86SE5 291 aaKnown RBP14.19□□□□□ -0.14
SNRPD1-204ENST00000582475 IQCA1Q86XH1 822 aa14.19□□□□□ -0.14
SNRPD1-204ENST00000582475 TTC14Q96N46 770 aa14.19□□□□□ -0.14
SNRPD1-204ENST00000582475 ZKSCAN3Q9BRR0 538 aa14.19□□□□□ -0.14
SNRPD1-204ENST00000582475 STX8Q9UNK0 236 aa14.19□□□□□ -0.14
SNRPD1-204ENST00000582475 SLC45A1Q9Y2W3 748 aa14.19□□□□□ -0.14
SNRPD1-204ENST00000582475 USP17L15C9J2P7 530 aa14.18□□□□□ -0.14
SNRPD1-204ENST00000582475 USP17L13C9JLJ4 530 aa14.18□□□□□ -0.14
SNRPD1-204ENST00000582475 USP17L11C9JVI0 530 aa14.18□□□□□ -0.14
SNRPD1-204ENST00000582475 USP17L18D6R9N7 530 aa14.18□□□□□ -0.14
SNRPD1-204ENST00000582475 USP17L22D6RA61 530 aa14.18□□□□□ -0.14
SNRPD1-204ENST00000582475 USP17L17D6RBQ6 530 aa14.18□□□□□ -0.14
SNRPD1-204ENST00000582475 USP17L19D6RCP7 530 aa14.18□□□□□ -0.14
SNRPD1-204ENST00000582475 USP17L20D6RJB6 530 aa14.18□□□□□ -0.14
SNRPD1-204ENST00000582475 F5H6K3 240 aa14.18□□□□□ -0.14
SNRPD1-204ENST00000582475 RAD21O60216 631 aa14.18□□□□□ -0.14
SNRPD1-204ENST00000582475 ZKSCAN1P17029 563 aaPredicted RBP14.18□□□□□ -0.14
SNRPD1-204ENST00000582475 HSPA4P34932 840 aa14.18□□□□□ -0.14
SNRPD1-204ENST00000582475 KLRC3Q07444 240 aa14.18□□□□□ -0.14
SNRPD1-204ENST00000582475 USP17L24Q0WX57 530 aa14.18□□□□□ -0.14
SNRPD1-204ENST00000582475 KIAA1755Q5JYT7 1200 aa14.18□□□□□ -0.14
SNRPD1-204ENST00000582475 CYB5R4Q7L1T6 521 aa14.18□□□□□ -0.14
SNRPD1-204ENST00000582475 LPAR1Q92633 364 aa14.18□□□□□ -0.14
SNRPD1-204ENST00000582475 KCNB2Q92953 911 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms