RNA–Protein interactions for RNA: ENST00000581705.5

SNX11-209, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 1,426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-209ENST00000581705 SH3D19Q5HYK7 790 aa24.18■■□□□ 1.46
SNX11-209ENST00000581705 PRPF38BQ5VTL8 546 aaKnown RBP24.18■■□□□ 1.46
SNX11-209ENST00000581705 MYPNQ86TC9 1320 aa24.18■■□□□ 1.46
SNX11-209ENST00000581705 AMOTL1Q8IY63 956 aa24.18■■□□□ 1.46
SNX11-209ENST00000581705 FBXL16Q8N461 479 aa24.18■■□□□ 1.46
SNX11-209ENST00000581705 STAG1Q8WVM7 1258 aa24.18■■□□□ 1.46
SNX11-209ENST00000581705 TRIM34Q9BYJ4 488 aa24.18■■□□□ 1.46
SNX11-209ENST00000581705 GINM1Q9NU53 330 aa24.18■■□□□ 1.46
SNX11-209ENST00000581705 PNMA3Q9UL41 463 aa24.18■■□□□ 1.46
SNX11-209ENST00000581705 NAV1Q8NEY1 1877 aa24.18■■□□□ 1.46
SNX11-209ENST00000581705 SLC3A2P08195 630 aaKnown RBP24.18■■□□□ 1.46
SNX11-209ENST00000581705 HAND2P61296 217 aa24.18■■□□□ 1.46
SNX11-209ENST00000581705 AKNAD1Q5T1N1 836 aa24.18■■□□□ 1.46
SNX11-209ENST00000581705 RALYLQ86SE5 291 aaKnown RBP24.18■■□□□ 1.46
SNX11-209ENST00000581705 NBPF3Q9H094 633 aa24.18■■□□□ 1.46
SNX11-209ENST00000581705 BAZ2AQ9UIF9 1905 aaKnown RBP24.17■■□□□ 1.46
SNX11-209ENST00000581705 LOC285556D6RIA3 1793 aa24.17■■□□□ 1.46
SNX11-209ENST00000581705 CD2BP2O95400 341 aaKnown RBP24.17■■□□□ 1.46
SNX11-209ENST00000581705 CTR9Q6PD62 1173 aa24.17■■□□□ 1.46
SNX11-209ENST00000581705 RAET1EQ8TD07 263 aa24.17■■□□□ 1.46
SNX11-209ENST00000581705 KRT23Q9C075 422 aa24.17■■□□□ 1.46
SNX11-209ENST00000581705 TAOK2Q9UL54 1235 aa24.17■■□□□ 1.46
SNX11-209ENST00000581705 FGRP09769 529 aa24.16■■□□□ 1.46
SNX11-209ENST00000581705 EXOSC10Q01780 885 aaKnown RBP24.16■■□□□ 1.46
SNX11-209ENST00000581705 PRKCZQ05513 592 aa24.16■■□□□ 1.46
SNX11-209ENST00000581705 PABPC4Q13310 644 aaKnown RBP eCLIP24.16■■□□□ 1.46
SNX11-209ENST00000581705 SLC4A8Q2Y0W8 1093 aa24.16■■□□□ 1.46
SNX11-209ENST00000581705 TBC1D10CQ8IV04 446 aa24.16■■□□□ 1.46
SNX11-209ENST00000581705 MTA3Q9BTC8 594 aa24.16■■□□□ 1.46
SNX11-209ENST00000581705 DDX60LQ5H9U9 1706 aaKnown RBP24.15■■□□□ 1.46
SNX11-209ENST00000581705 ROBO3Q96MS0 1386 aa24.15■■□□□ 1.46
SNX11-209ENST00000581705 USP17L12C9JPN9 530 aa24.15■■□□□ 1.46
SNX11-209ENST00000581705 USP17L21D6R901 530 aa24.15■■□□□ 1.46
SNX11-209ENST00000581705 MYCP01106 439 aaPredicted RBP24.15■■□□□ 1.46
SNX11-209ENST00000581705 GRK4P32298 578 aa24.15■■□□□ 1.46
SNX11-209ENST00000581705 MCM5P33992 734 aa24.15■■□□□ 1.46
SNX11-209ENST00000581705 BACE1P56817 501 aa24.15■■□□□ 1.46
SNX11-209ENST00000581705 MFSD6Q6ZSS7 791 aa24.15■■□□□ 1.46
SNX11-209ENST00000581705 MB21D2Q8IYB1 491 aaPredicted RBP24.15■■□□□ 1.46
SNX11-209ENST00000581705 MCM9Q9NXL9 1143 aa24.15■■□□□ 1.46
SNX11-209ENST00000581705 ZBTB21Q9ULJ3 1066 aa24.15■■□□□ 1.46
SNX11-209ENST00000581705 GDF11O95390 407 aa24.14■■□□□ 1.45
SNX11-209ENST00000581705 AK2P54819 239 aa24.14■■□□□ 1.45
SNX11-209ENST00000581705 MTMR2Q13614 643 aa24.14■■□□□ 1.45
SNX11-209ENST00000581705 SHROOM1Q2M3G4 852 aaPredicted RBP24.14■■□□□ 1.45
SNX11-209ENST00000581705 ANKRD13CQ8N6S4 541 aa24.14■■□□□ 1.45
SNX11-209ENST00000581705 ZSCAN31Q96LW9 406 aaPredicted RBP24.14■■□□□ 1.45
SNX11-209ENST00000581705 AGXT2Q9BYV1 514 aa24.14■■□□□ 1.45
SNX11-209ENST00000581705 EHD4Q9H223 541 aa24.14■■□□□ 1.45
SNX11-209ENST00000581705 LIMCH1Q9UPQ0 1083 aa24.14■■□□□ 1.45
SNX11-209ENST00000581705 MGAMO43451 1857 aa24.14■■□□□ 1.45
SNX11-209ENST00000581705 FAM110CQ1W6H9 321 aa24.13■■□□□ 1.45
SNX11-209ENST00000581705 C12orf60Q5U649 245 aa24.13■■□□□ 1.45
SNX11-209ENST00000581705 GABRQQ9UN88 632 aa24.13■■□□□ 1.45
SNX11-209ENST00000581705 MYH1P12882 1939 aa24.13■■□□□ 1.45
SNX11-209ENST00000581705 MINDY4BA8MYZ0 360 aa24.12■■□□□ 1.45
SNX11-209ENST00000581705 GCLCP48506 637 aaPredicted RBP24.12■■□□□ 1.45
SNX11-209ENST00000581705 TATDN1Q6P1N9 297 aa24.12■■□□□ 1.45
SNX11-209ENST00000581705 ASCC2Q9H1I8 757 aaPredicted RBP24.12■■□□□ 1.45
SNX11-209ENST00000581705 SH2B1Q9NRF2 756 aaPredicted RBP24.12■■□□□ 1.45
SNX11-209ENST00000581705 SERPINB13Q9UIV8 391 aa24.12■■□□□ 1.45
SNX11-209ENST00000581705 C19orf81C9J6K1 198 aa24.11■■□□□ 1.45
SNX11-209ENST00000581705 TNPO2O14787 897 aaKnown RBP24.11■■□□□ 1.45
SNX11-209ENST00000581705 ORC4O43929 436 aa24.11■■□□□ 1.45
SNX11-209ENST00000581705 MTFR1Q15390 333 aa24.11■■□□□ 1.45
SNX11-209ENST00000581705 TTC6Q86TZ1 520 aa24.11■■□□□ 1.45
SNX11-209ENST00000581705 ZNF287Q9HBT7 754 aa24.11■■□□□ 1.45
SNX11-209ENST00000581705 TMOD4Q9NZQ9 345 aa24.11■■□□□ 1.45
SNX11-209ENST00000581705 USP17L10C9JJH3 530 aa24.1■■□□□ 1.45
SNX11-209ENST00000581705 CPA1P15085 419 aa24.1■■□□□ 1.45
SNX11-209ENST00000581705 FLT3LGP49771 235 aa24.1■■□□□ 1.45
SNX11-209ENST00000581705 CTDSPL2Q05D32 466 aa24.1■■□□□ 1.45
SNX11-209ENST00000581705 PDE4BQ07343 736 aa24.1■■□□□ 1.45
SNX11-209ENST00000581705 SLAIN1Q8ND83 568 aa24.1■■□□□ 1.45
SNX11-209ENST00000581705 GH2P01242 217 aa24.1■■□□□ 1.45
SNX11-209ENST00000581705 HOXA7P31268 230 aaPredicted RBP24.1■■□□□ 1.45
SNX11-209ENST00000581705 ESR2Q92731 530 aa24.1■■□□□ 1.45
SNX11-209ENST00000581705 TMX3Q96JJ7 454 aa24.1■■□□□ 1.45
SNX11-209ENST00000581705 TMEM87BQ96K49 555 aa24.1■■□□□ 1.45
SNX11-209ENST00000581705 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.1■■□□□ 1.45
SNX11-209ENST00000581705 POLR3DP05423 398 aaPredicted RBP24.09■■□□□ 1.45
SNX11-209ENST00000581705 PLCD1P51178 756 aa24.09■■□□□ 1.45
SNX11-209ENST00000581705 IRF5Q13568 498 aa24.09■■□□□ 1.45
SNX11-209ENST00000581705 CUL4AQ13619 759 aa24.09■■□□□ 1.45
SNX11-209ENST00000581705 NEDD4P46934 1319 aa24.08■■□□□ 1.45
SNX11-209ENST00000581705 PRC1O43663 620 aa24.08■■□□□ 1.44
SNX11-209ENST00000581705 EVCP57679 992 aa24.08■■□□□ 1.44
SNX11-209ENST00000581705 TOB2Q14106 344 aaPredicted RBP24.08■■□□□ 1.44
SNX11-209ENST00000581705 Q6ZUG5 572 aa24.08■■□□□ 1.44
SNX11-209ENST00000581705 COA7Q96BR5 231 aa24.08■■□□□ 1.44
SNX11-209ENST00000581705 CHMP4CQ96CF2 233 aa24.08■■□□□ 1.44
SNX11-209ENST00000581705 INTS4Q96HW7 963 aaKnown RBP24.08■■□□□ 1.44
SNX11-209ENST00000581705 ADCY3O60266 1144 aa24.07■■□□□ 1.44
SNX11-209ENST00000581705 CCL5P13501 91 aa24.07■■□□□ 1.44
SNX11-209ENST00000581705 UBXN2AP68543 259 aa24.07■■□□□ 1.44
SNX11-209ENST00000581705 IRX3P78415 501 aaPredicted RBP24.07■■□□□ 1.44
SNX11-209ENST00000581705 FGD1P98174 961 aa24.07■■□□□ 1.44
SNX11-209ENST00000581705 CERKLQ49MI3 558 aaPredicted RBP24.07■■□□□ 1.44
SNX11-209ENST00000581705 PXYLP1Q8TE99 480 aa24.07■■□□□ 1.44
SNX11-209ENST00000581705 MORF4L1Q9UBU8 362 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms