RNA–Protein interactions for RNA: ENST00000581477.1

DDX42-213, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-213ENST00000581477 NFX1Q12986 1120 aaKnown RBP8.37□□□□□ -1.07
DDX42-213ENST00000581477 TOB2Q14106 344 aaPredicted RBP8.37□□□□□ -1.07
DDX42-213ENST00000581477 ANKRD1Q15327 319 aa8.37□□□□□ -1.07
DDX42-213ENST00000581477 TATDN1Q6P1N9 297 aa8.37□□□□□ -1.07
DDX42-213ENST00000581477 CYB5R4Q7L1T6 521 aa8.37□□□□□ -1.07
DDX42-213ENST00000581477 APOBEC3FQ8IUX4 373 aaKnown RBP8.37□□□□□ -1.07
DDX42-213ENST00000581477 IGDCC4Q8TDY8 1250 aa8.37□□□□□ -1.07
DDX42-213ENST00000581477 DYNLL2Q96FJ2 89 aa8.37□□□□□ -1.07
DDX42-213ENST00000581477 TEPSINQ96N21 525 aa8.37□□□□□ -1.07
DDX42-213ENST00000581477 MTRQ99707 1265 aa8.37□□□□□ -1.07
DDX42-213ENST00000581477 TBC1D2Q9BYX2 928 aa8.37□□□□□ -1.07
DDX42-213ENST00000581477 VEZTQ9HBM0 779 aa8.37□□□□□ -1.07
DDX42-213ENST00000581477 TCP11L1Q9NUJ3 509 aa8.37□□□□□ -1.07
DDX42-213ENST00000581477 HERC5Q9UII4 1024 aaKnown RBP8.37□□□□□ -1.07
DDX42-213ENST00000581477 PPP2R3BQ9Y5P8 575 aa8.37□□□□□ -1.07
DDX42-213ENST00000581477 ASTN2O75129 1339 aaPredicted RBP8.36□□□□□ -1.07
DDX42-213ENST00000581477 K7ELQ4 463 aaPredicted RBP8.36□□□□□ -1.07
DDX42-213ENST00000581477 PRDM1O75626 825 aa8.36□□□□□ -1.07
DDX42-213ENST00000581477 SHMT1P34896 483 aa8.36□□□□□ -1.07
DDX42-213ENST00000581477 LIFRP42702 1097 aa8.36□□□□□ -1.07
DDX42-213ENST00000581477 PRR20EP86478 221 aa8.36□□□□□ -1.07
DDX42-213ENST00000581477 PRR20CP86479 221 aa8.36□□□□□ -1.07
DDX42-213ENST00000581477 PRR20DP86480 221 aa8.36□□□□□ -1.07
DDX42-213ENST00000581477 PRR20BP86481 221 aa8.36□□□□□ -1.07
DDX42-213ENST00000581477 PRR20AP86496 221 aa8.36□□□□□ -1.07
DDX42-213ENST00000581477 BECN1Q14457 450 aa8.36□□□□□ -1.07
DDX42-213ENST00000581477 RASA3Q14644 834 aa8.36□□□□□ -1.07
DDX42-213ENST00000581477 SEC23AQ15436 765 aa8.36□□□□□ -1.07
DDX42-213ENST00000581477 SLC4A8Q2Y0W8 1093 aa8.36□□□□□ -1.07
DDX42-213ENST00000581477 ANGEL2Q5VTE6 544 aaKnown RBP8.36□□□□□ -1.07
DDX42-213ENST00000581477 Q6ZUG5 572 aa8.36□□□□□ -1.07
DDX42-213ENST00000581477 PNMA8AQ86V59 439 aaPredicted RBP8.36□□□□□ -1.07
DDX42-213ENST00000581477 SGMS1Q86VZ5 419 aa8.36□□□□□ -1.07
DDX42-213ENST00000581477 ZSCAN29Q8IWY8 852 aaPredicted RBP8.36□□□□□ -1.07
DDX42-213ENST00000581477 ZNF444Q8N0Y2 327 aaPredicted RBP8.36□□□□□ -1.07
DDX42-213ENST00000581477 TMTC2Q8N394 836 aa8.36□□□□□ -1.07
DDX42-213ENST00000581477 SLC44A5Q8NCS7 719 aa8.36□□□□□ -1.07
DDX42-213ENST00000581477 NEDD1Q8NHV4 660 aa8.36□□□□□ -1.07
DDX42-213ENST00000581477 ANKS1AQ92625 1134 aa8.36□□□□□ -1.07
DDX42-213ENST00000581477 CCDC17Q96LX7 622 aa8.36□□□□□ -1.07
DDX42-213ENST00000581477 TCEANC2Q96MN5 208 aa8.36□□□□□ -1.07
DDX42-213ENST00000581477 IPO9Q96P70 1041 aaKnown RBP8.36□□□□□ -1.07
DDX42-213ENST00000581477 CSRNP1Q96S65 589 aa8.36□□□□□ -1.07
DDX42-213ENST00000581477 TMEM39BQ9GZU3 492 aa8.36□□□□□ -1.07
DDX42-213ENST00000581477 DEFB129Q9H1M3 183 aa8.36□□□□□ -1.07
DDX42-213ENST00000581477 TAF1DQ9H5J8 278 aaPredicted RBP8.36□□□□□ -1.07
DDX42-213ENST00000581477 DNAJC18Q9H819 358 aa8.36□□□□□ -1.07
DDX42-213ENST00000581477 MKNK2Q9HBH9 465 aa8.36□□□□□ -1.07
DDX42-213ENST00000581477 SEPT9Q9UHD8 586 aaPredicted RBP8.36□□□□□ -1.07
DDX42-213ENST00000581477 LIMCH1Q9UPQ0 1083 aa8.36□□□□□ -1.07
DDX42-213ENST00000581477 PLIN4Q96Q06 1357 aa8.35□□□□□ -1.07
DDX42-213ENST00000581477 POLR2AP24928 1970 aaKnown RBP8.35□□□□□ -1.07
DDX42-213ENST00000581477 SH2B2O14492 632 aaPredicted RBP8.35□□□□□ -1.07
DDX42-213ENST00000581477 RANBP6O60518 1105 aaKnown RBP8.35□□□□□ -1.07
DDX42-213ENST00000581477 NOVP48745 357 aa8.35□□□□□ -1.07
DDX42-213ENST00000581477 TFAP4Q01664 338 aa8.35□□□□□ -1.07
DDX42-213ENST00000581477 NBR1Q14596 966 aa8.35□□□□□ -1.07
DDX42-213ENST00000581477 SART3Q15020 963 aaKnown RBP8.35□□□□□ -1.07
DDX42-213ENST00000581477 CCDC178Q5BJE1 867 aa8.35□□□□□ -1.07
DDX42-213ENST00000581477 RRP12Q5JTH9 1297 aaKnown RBP8.35□□□□□ -1.07
DDX42-213ENST00000581477 CHST3Q7LGC8 479 aa8.35□□□□□ -1.07
DDX42-213ENST00000581477 IQCA1Q86XH1 822 aa8.35□□□□□ -1.07
DDX42-213ENST00000581477 DGKHQ86XP1 1220 aa8.35□□□□□ -1.07
DDX42-213ENST00000581477 HSCBQ8IWL3 235 aa8.35□□□□□ -1.07
DDX42-213ENST00000581477 STK11IPQ8N1F8 1099 aa8.35□□□□□ -1.07
DDX42-213ENST00000581477 CRACR2BQ8N4Y2 399 aaPredicted RBP8.35□□□□□ -1.07
DDX42-213ENST00000581477 DDX12PQ92771 950 aa8.35□□□□□ -1.07
DDX42-213ENST00000581477 HOOK2Q96ED9 719 aa8.35□□□□□ -1.07
DDX42-213ENST00000581477 ZNF274Q96GC6 653 aaPredicted RBP8.35□□□□□ -1.07
DDX42-213ENST00000581477 ZSCAN31Q96LW9 406 aaPredicted RBP8.35□□□□□ -1.07
DDX42-213ENST00000581477 ZSCAN10Q96SZ4 725 aaPredicted RBP8.35□□□□□ -1.07
DDX42-213ENST00000581477 IL17RBQ9NRM6 502 aa8.35□□□□□ -1.07
DDX42-213ENST00000581477 TOMM22Q9NS69 142 aa8.35□□□□□ -1.07
DDX42-213ENST00000581477 GGA3Q9NZ52 723 aa8.35□□□□□ -1.07
DDX42-213ENST00000581477 ANGEL1Q9UNK9 670 aaKnown RBP8.35□□□□□ -1.07
DDX42-213ENST00000581477 MYH8P13535 1937 aa8.35□□□□□ -1.07
DDX42-213ENST00000581477 GREB1LQ9C091 1923 aaPredicted RBP8.35□□□□□ -1.07
DDX42-213ENST00000581477 IGKV6D-41A0A0C4DH26 115 aa8.34□□□□□ -1.07
DDX42-213ENST00000581477 TSPY2A6NKD2 308 aa8.34□□□□□ -1.07
DDX42-213ENST00000581477 IFIT3O14879 490 aaKnown RBP8.34□□□□□ -1.07
DDX42-213ENST00000581477 VEGFAP15692 232 aaPredicted RBP8.34□□□□□ -1.07
DDX42-213ENST00000581477 RCAN1P53805 252 aa8.34□□□□□ -1.07
DDX42-213ENST00000581477 PLCB2Q00722 1185 aa8.34□□□□□ -1.07
DDX42-213ENST00000581477 CUL4AQ13619 759 aa8.34□□□□□ -1.07
DDX42-213ENST00000581477 CERKLQ49MI3 558 aaPredicted RBP8.34□□□□□ -1.07
DDX42-213ENST00000581477 TMEM67Q5HYA8 995 aa8.34□□□□□ -1.07
DDX42-213ENST00000581477 FAM47AQ5JRC9 791 aa8.34□□□□□ -1.07
DDX42-213ENST00000581477 RCSD1Q6JBY9 416 aa8.34□□□□□ -1.07
DDX42-213ENST00000581477 ENAHQ8N8S7 591 aaPredicted RBP8.34□□□□□ -1.07
DDX42-213ENST00000581477 BRF1Q92994 677 aa8.34□□□□□ -1.07
DDX42-213ENST00000581477 DCPSQ96C86 337 aaKnown RBP8.34□□□□□ -1.07
DDX42-213ENST00000581477 TMX3Q96JJ7 454 aa8.34□□□□□ -1.07
DDX42-213ENST00000581477 UBAC1Q9BSL1 405 aa8.34□□□□□ -1.07
DDX42-213ENST00000581477 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.34□□□□□ -1.07
DDX42-213ENST00000581477 LRRC2Q9BYS8 371 aa8.34□□□□□ -1.07
DDX42-213ENST00000581477 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.34□□□□□ -1.07
DDX42-213ENST00000581477 LY9Q9HBG7 655 aa8.34□□□□□ -1.07
DDX42-213ENST00000581477 SH2B1Q9NRF2 756 aaPredicted RBP8.34□□□□□ -1.07
DDX42-213ENST00000581477 TPCN1Q9ULQ1 816 aa8.34□□□□□ -1.07
DDX42-213ENST00000581477 TNKSO95271 1327 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms