RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 MTMR10Q9NXD2 777 aa12.45□□□□□ -0.42
GGA3-210ENST00000580799 SWAP70Q9UH65 585 aa12.45□□□□□ -0.42
GGA3-210ENST00000580799 ZNF532Q9HCE3 1301 aa12.44□□□□□ -0.42
GGA3-210ENST00000580799 MS4A1P11836 297 aa12.44□□□□□ -0.42
GGA3-210ENST00000580799 CYBAP13498 195 aa12.44□□□□□ -0.42
GGA3-210ENST00000580799 MDM2Q00987 491 aaPredicted RBP12.44□□□□□ -0.42
GGA3-210ENST00000580799 Q7L0L9 218 aa12.44□□□□□ -0.42
GGA3-210ENST00000580799 NPLOC4Q8TAT6 608 aa12.44□□□□□ -0.42
GGA3-210ENST00000580799 MOV10L1Q9BXT6 1211 aaKnown RBP12.44□□□□□ -0.42
GGA3-210ENST00000580799 SPATC1LQ9H0A9 340 aa12.44□□□□□ -0.42
GGA3-210ENST00000580799 MROH8Q9H579 483 aa12.44□□□□□ -0.42
GGA3-210ENST00000580799 SH2D4AQ9H788 454 aa12.44□□□□□ -0.42
GGA3-210ENST00000580799 IL1RAPL2Q9NP60 686 aa12.44□□□□□ -0.42
GGA3-210ENST00000580799 DCP1AQ9NPI6 582 aaPredicted RBP12.44□□□□□ -0.42
GGA3-210ENST00000580799 SLC5A4Q9NY91 659 aa12.44□□□□□ -0.42
GGA3-210ENST00000580799 PRKAG2Q9UGJ0 569 aa12.44□□□□□ -0.42
GGA3-210ENST00000580799 RLFQ13129 1914 aa12.44□□□□□ -0.42
GGA3-210ENST00000580799 COL6A3P12111 3177 aa12.43□□□□□ -0.42
GGA3-210ENST00000580799 A0A1W2PRG0 241 aa12.43□□□□□ -0.42
GGA3-210ENST00000580799 TCRBV5S4A2TA0A5A2 114 aa12.43□□□□□ -0.42
GGA3-210ENST00000580799 GOLIM4O00461 696 aa12.43□□□□□ -0.42
GGA3-210ENST00000580799 HMMRO75330 724 aa12.43□□□□□ -0.42
GGA3-210ENST00000580799 ADORA2AP29274 412 aa12.43□□□□□ -0.42
GGA3-210ENST00000580799 FAM109BQ6ICB4 259 aaPredicted RBP12.43□□□□□ -0.42
GGA3-210ENST00000580799 ABRAQ8N0Z2 381 aa12.43□□□□□ -0.42
GGA3-210ENST00000580799 KIF1BPQ96EK5 621 aa12.43□□□□□ -0.42
GGA3-210ENST00000580799 ARHGEF10LQ9HCE6 1279 aa12.43□□□□□ -0.42
GGA3-210ENST00000580799 LTBP2Q14767 1821 aa12.43□□□□□ -0.42
GGA3-210ENST00000580799 PARP14Q460N5 1801 aa12.42□□□□□ -0.42
GGA3-210ENST00000580799 KBTBD13C9JR72 458 aa12.42□□□□□ -0.42
GGA3-210ENST00000580799 SEPT4O43236 478 aa12.42□□□□□ -0.42
GGA3-210ENST00000580799 IFIT2P09913 472 aaKnown RBP12.42□□□□□ -0.42
GGA3-210ENST00000580799 ERCC3P19447 782 aa12.42□□□□□ -0.42
GGA3-210ENST00000580799 RPAP2Q8IXW5 612 aaPredicted RBP12.42□□□□□ -0.42
GGA3-210ENST00000580799 LCORLQ8N3X6 602 aa12.42□□□□□ -0.42
GGA3-210ENST00000580799 TRPV1Q8NER1 839 aa12.42□□□□□ -0.42
GGA3-210ENST00000580799 PANK1Q8TE04 598 aa12.42□□□□□ -0.42
GGA3-210ENST00000580799 SDR42E1Q8WUS8 393 aa12.42□□□□□ -0.42
GGA3-210ENST00000580799 CCDC17Q96LX7 622 aa12.42□□□□□ -0.42
GGA3-210ENST00000580799 DNAJC2Q99543 621 aaKnown RBP12.42□□□□□ -0.42
GGA3-210ENST00000580799 ATP8A2Q9NTI2 1148 aa12.42□□□□□ -0.42
GGA3-210ENST00000580799 TMX2Q9Y320 296 aa12.42□□□□□ -0.42
GGA3-210ENST00000580799 POTEB2H3BUK9 544 aa12.41□□□□□ -0.42
GGA3-210ENST00000580799 FLOT1O75955 427 aa12.41□□□□□ -0.42
GGA3-210ENST00000580799 DSG3P32926 999 aa12.41□□□□□ -0.42
GGA3-210ENST00000580799 ATN1P54259 1190 aaPredicted RBP12.41□□□□□ -0.42
GGA3-210ENST00000580799 RTP1P59025 263 aa12.41□□□□□ -0.42
GGA3-210ENST00000580799 ICA1Q05084 483 aa12.41□□□□□ -0.42
GGA3-210ENST00000580799 AMOTL1Q8IY63 956 aa12.41□□□□□ -0.42
GGA3-210ENST00000580799 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.41□□□□□ -0.423e-7■■■■□ 19.5
GGA3-210ENST00000580799 WDR46O15213 610 aaKnown RBP12.4□□□□□ -0.42
GGA3-210ENST00000580799 RAB11FIP3O75154 756 aa12.4□□□□□ -0.42
GGA3-210ENST00000580799 SLC25A27O95847 323 aa12.4□□□□□ -0.42
GGA3-210ENST00000580799 FCER1AP12319 257 aa12.4□□□□□ -0.42
GGA3-210ENST00000580799 ADD2P35612 726 aa12.4□□□□□ -0.42
GGA3-210ENST00000580799 EVX2Q03828 476 aa12.4□□□□□ -0.42
GGA3-210ENST00000580799 PLS1Q14651 629 aa12.4□□□□□ -0.42
GGA3-210ENST00000580799 GJC2Q5T442 439 aaPredicted RBP12.4□□□□□ -0.42
GGA3-210ENST00000580799 NCAPG2Q86XI2 1143 aa12.4□□□□□ -0.42
GGA3-210ENST00000580799 SIAH1Q8IUQ4 282 aa12.4□□□□□ -0.42
GGA3-210ENST00000580799 SLC44A5Q8NCS7 719 aa12.4□□□□□ -0.42
GGA3-210ENST00000580799 DDRGK1Q96HY6 314 aa12.4□□□□□ -0.42
GGA3-210ENST00000580799 VCPKMTQ9H867 229 aa12.4□□□□□ -0.42
GGA3-210ENST00000580799 ARMT1Q9H993 441 aa12.4□□□□□ -0.42
GGA3-210ENST00000580799 PAG1Q9NWQ8 432 aa12.4□□□□□ -0.42
GGA3-210ENST00000580799 NRBP1Q9UHY1 535 aa12.4□□□□□ -0.42
GGA3-210ENST00000580799 ATP11BQ9Y2G3 1177 aa12.4□□□□□ -0.42
GGA3-210ENST00000580799 ZBED9Q6R2W3 1325 aa12.39□□□□□ -0.43
GGA3-210ENST00000580799 MYH7P12883 1935 aa12.39□□□□□ -0.43
GGA3-210ENST00000580799 BAZ2AQ9UIF9 1905 aaKnown RBP12.39□□□□□ -0.43
GGA3-210ENST00000580799 COBLO75128 1261 aa12.39□□□□□ -0.43
GGA3-210ENST00000580799 MBD4O95243 580 aa12.39□□□□□ -0.43
GGA3-210ENST00000580799 CYP2D6P10635 497 aa12.39□□□□□ -0.43
GGA3-210ENST00000580799 ATP5JP18859 108 aa12.39□□□□□ -0.43
GGA3-210ENST00000580799 SNX17Q15036 470 aa12.39□□□□□ -0.43
GGA3-210ENST00000580799 KIAA1755Q5JYT7 1200 aa12.39□□□□□ -0.43
GGA3-210ENST00000580799 C12orf60Q5U649 245 aa12.39□□□□□ -0.43
GGA3-210ENST00000580799 C1orf53Q5VUE5 145 aa12.39□□□□□ -0.43
GGA3-210ENST00000580799 SLC39A5Q6ZMH5 540 aa12.39□□□□□ -0.43
GGA3-210ENST00000580799 SPICE1Q8N0Z3 855 aa12.39□□□□□ -0.43
GGA3-210ENST00000580799 ATG4CQ96DT6 458 aa12.39□□□□□ -0.43
GGA3-210ENST00000580799 DYNLL2Q96FJ2 89 aa12.39□□□□□ -0.43
GGA3-210ENST00000580799 MAML3Q96JK9 1138 aa12.39□□□□□ -0.43
GGA3-210ENST00000580799 CHMP4BQ9H444 224 aaKnown RBP12.39□□□□□ -0.43
GGA3-210ENST00000580799 KANSL2Q9H9L4 492 aa12.39□□□□□ -0.43
GGA3-210ENST00000580799 DDX19BQ9UMR2 479 aa12.39□□□□□ -0.43
GGA3-210ENST00000580799 APBB1O00213 710 aa12.38□□□□□ -0.43
GGA3-210ENST00000580799 AKR1B1P15121 316 aa12.38□□□□□ -0.43
GGA3-210ENST00000580799 COPB2P35606 906 aa12.38□□□□□ -0.43
GGA3-210ENST00000580799 CDK8P49336 464 aa12.38□□□□□ -0.43
GGA3-210ENST00000580799 UBE3CQ15386 1083 aa12.38□□□□□ -0.43
GGA3-210ENST00000580799 C16orf86Q6ZW13 317 aa12.38□□□□□ -0.43
GGA3-210ENST00000580799 ZBTB40Q9NUA8 1239 aa12.38□□□□□ -0.43
GGA3-210ENST00000580799 ADAMTS5Q9UNA0 930 aa12.38□□□□□ -0.43
GGA3-210ENST00000580799 COL11A1P12107 1806 aaPredicted RBP12.38□□□□□ -0.43
GGA3-210ENST00000580799 DNAH12Q6ZR08 3092 aa12.38□□□□□ -0.43
GGA3-210ENST00000580799 USP17L12C9JPN9 530 aa12.37□□□□□ -0.43
GGA3-210ENST00000580799 USP17L21D6R901 530 aa12.37□□□□□ -0.43
GGA3-210ENST00000580799 PRKAB2O43741 272 aa12.37□□□□□ -0.43
GGA3-210ENST00000580799 ADCYAP1R1P41586 468 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms