RNA–Protein interactions for RNA: ENST00000580621.5

KRT16P3-203, Transcript of keratin 16 pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene KRT16P3, Length 1,939 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT16P3-203ENST00000580621 CACNB3P54284 484 aa22.76■■□□□ 1.23
KRT16P3-203ENST00000580621 ZFPM1Q8IX07 1006 aa22.76■■□□□ 1.23
KRT16P3-203ENST00000580621 EHD4Q9H223 541 aa22.76■■□□□ 1.23
KRT16P3-203ENST00000580621 MTMR7Q9Y216 660 aa22.76■■□□□ 1.23
KRT16P3-203ENST00000580621 KINO60870 393 aaKnown RBP22.75■■□□□ 1.23
KRT16P3-203ENST00000580621 SHMT1P34896 483 aa22.75■■□□□ 1.23
KRT16P3-203ENST00000580621 LARGE2Q8N3Y3 721 aa22.75■■□□□ 1.23
KRT16P3-203ENST00000580621 PIBF1Q8WXW3 757 aa22.75■■□□□ 1.23
KRT16P3-203ENST00000580621 LZTS2Q9BRK4 669 aa22.75■■□□□ 1.23
KRT16P3-203ENST00000580621 BRMS1Q9HCU9 246 aa22.75■■□□□ 1.23
KRT16P3-203ENST00000580621 ZNF277Q9NRM2 450 aaPredicted RBP22.75■■□□□ 1.23
KRT16P3-203ENST00000580621 IGKV6D-41A0A0C4DH26 115 aa22.74■■□□□ 1.23
KRT16P3-203ENST00000580621 A0A1B0GVL5 298 aa22.74■■□□□ 1.23
KRT16P3-203ENST00000580621 NPM3O75607 178 aaKnown RBP22.74■■□□□ 1.23
KRT16P3-203ENST00000580621 TGFB2P61812 414 aa22.74■■□□□ 1.23
KRT16P3-203ENST00000580621 CCDC173Q0VFZ6 552 aa22.74■■□□□ 1.23
KRT16P3-203ENST00000580621 SOGA3Q5TF21 947 aa22.74■■□□□ 1.23
KRT16P3-203ENST00000580621 FMR1NBQ8N0W7 255 aaPredicted RBP22.74■■□□□ 1.23
KRT16P3-203ENST00000580621 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.74■■□□□ 1.23
KRT16P3-203ENST00000580621 MTMR4Q9NYA4 1195 aa22.74■■□□□ 1.23
KRT16P3-203ENST00000580621 FAM198AQ9UFP1 575 aa22.74■■□□□ 1.23
KRT16P3-203ENST00000580621 COL4A5P29400 1685 aa22.74■■□□□ 1.23
KRT16P3-203ENST00000580621 CTAGE5O15320 804 aa22.74■■□□□ 1.23
KRT16P3-203ENST00000580621 CMA1P23946 247 aa22.74■■□□□ 1.23
KRT16P3-203ENST00000580621 NPY5RQ15761 445 aa22.74■■□□□ 1.23
KRT16P3-203ENST00000580621 SLC35G1Q2M3R5 365 aa22.74■■□□□ 1.23
KRT16P3-203ENST00000580621 CFAP100Q494V2 611 aa22.74■■□□□ 1.23
KRT16P3-203ENST00000580621 VPS33BQ9H267 617 aa22.74■■□□□ 1.23
KRT16P3-203ENST00000580621 DHX36Q9H2U1 1008 aaKnown RBP22.74■■□□□ 1.23
KRT16P3-203ENST00000580621 PIM2Q9P1W9 311 aa22.74■■□□□ 1.23
KRT16P3-203ENST00000580621 ATF5Q9Y2D1 282 aaPredicted RBP22.74■■□□□ 1.23
KRT16P3-203ENST00000580621 GREB1LQ9C091 1923 aaPredicted RBP22.74■■□□□ 1.23
KRT16P3-203ENST00000580621 POLD1P28340 1107 aa22.73■■□□□ 1.23
KRT16P3-203ENST00000580621 NDUFA8P51970 172 aa22.73■■□□□ 1.23
KRT16P3-203ENST00000580621 TYRO3Q06418 890 aa22.73■■□□□ 1.23
KRT16P3-203ENST00000580621 TCP10Q12799 353 aa22.73■■□□□ 1.23
KRT16P3-203ENST00000580621 RSBN1LQ6PCB5 846 aaPredicted RBP22.73■■□□□ 1.23
KRT16P3-203ENST00000580621 PPP1R9BQ96SB3 815 aa22.73■■□□□ 1.23
KRT16P3-203ENST00000580621 CABP5Q9NP86 173 aa22.73■■□□□ 1.23
KRT16P3-203ENST00000580621 PARP1P09874 1014 aaKnown RBP22.72■■□□□ 1.23
KRT16P3-203ENST00000580621 VEGFAP15692 232 aaPredicted RBP22.72■■□□□ 1.23
KRT16P3-203ENST00000580621 UVSSAQ2YD98 709 aa22.72■■□□□ 1.23
KRT16P3-203ENST00000580621 MTFR1LQ9H019 292 aa22.72■■□□□ 1.23
KRT16P3-203ENST00000580621 KLRF2D3W0D1 207 aa22.72■■□□□ 1.23
KRT16P3-203ENST00000580621 NLRP5P59047 1200 aa22.72■■□□□ 1.23
KRT16P3-203ENST00000580621 TNFRSF25Q93038 417 aa22.72■■□□□ 1.23
KRT16P3-203ENST00000580621 SH3GLB2Q9NR46 395 aa22.72■■□□□ 1.23
KRT16P3-203ENST00000580621 CYTH3O43739 400 aa22.71■■□□□ 1.23
KRT16P3-203ENST00000580621 CUTAO60888 179 aa22.71■■□□□ 1.23
KRT16P3-203ENST00000580621 RAD17O75943 681 aa22.71■■□□□ 1.23
KRT16P3-203ENST00000580621 VIL1P09327 827 aaKnown RBP22.71■■□□□ 1.23
KRT16P3-203ENST00000580621 GOLGA8HP0CJ92 632 aa22.71■■□□□ 1.23
KRT16P3-203ENST00000580621 RASGRP2Q7LDG7 609 aa22.71■■□□□ 1.23
KRT16P3-203ENST00000580621 SPZ1Q9BXG8 430 aa22.71■■□□□ 1.23
KRT16P3-203ENST00000580621 PCDHB6Q9Y5E3 794 aa22.71■■□□□ 1.23
KRT16P3-203ENST00000580621 MRVI1Q9Y6F6 885 aa22.71■■□□□ 1.23
KRT16P3-203ENST00000580621 FAM205CA6NFA0 338 aa22.7■■□□□ 1.23
KRT16P3-203ENST00000580621 DDTLA6NHG4 134 aaPredicted RBP22.7■■□□□ 1.23
KRT16P3-203ENST00000580621 PSMD14O00487 310 aa22.7■■□□□ 1.23
KRT16P3-203ENST00000580621 SH3BP5LQ7L8J4 393 aa22.7■■□□□ 1.23
KRT16P3-203ENST00000580621 TDRD3Q9H7E2 651 aaKnown RBP22.7■■□□□ 1.23
KRT16P3-203ENST00000580621 PI4KBQ9UBF8 816 aa22.7■■□□□ 1.23
KRT16P3-203ENST00000580621 BRCA1P38398 1863 aaKnown RBP22.7■■□□□ 1.23
KRT16P3-203ENST00000580621 PFKFB1P16118 471 aa22.7■■□□□ 1.22
KRT16P3-203ENST00000580621 EARS2Q5JPH6 523 aaKnown RBP22.7■■□□□ 1.22
KRT16P3-203ENST00000580621 USP17L2Q6R6M4 530 aa22.7■■□□□ 1.22
KRT16P3-203ENST00000580621 SASS6Q6UVJ0 657 aa22.7■■□□□ 1.22
KRT16P3-203ENST00000580621 GPKOWQ92917 476 aaPredicted RBP eCLIP22.7■■□□□ 1.22
KRT16P3-203ENST00000580621 PRMT6Q96LA8 375 aaPredicted RBP22.7■■□□□ 1.22
KRT16P3-203ENST00000580621 DNAJC18Q9H819 358 aa22.7■■□□□ 1.22
KRT16P3-203ENST00000580621 MYH4Q9Y623 1939 aa22.69■■□□□ 1.22
KRT16P3-203ENST00000580621 USP17L5A8MUK1 530 aa22.69■■□□□ 1.22
KRT16P3-203ENST00000580621 TTLL1O95922 423 aa22.69■■□□□ 1.22
KRT16P3-203ENST00000580621 CALML3P27482 149 aa22.69■■□□□ 1.22
KRT16P3-203ENST00000580621 SHC4Q6S5L8 630 aa22.69■■□□□ 1.22
KRT16P3-203ENST00000580621 ZSCAN29Q8IWY8 852 aaPredicted RBP22.69■■□□□ 1.22
KRT16P3-203ENST00000580621 KRI1Q8N9T8 703 aaKnown RBP22.69■■□□□ 1.22
KRT16P3-203ENST00000580621 UBE2Q2Q8WVN8 375 aa22.69■■□□□ 1.22
KRT16P3-203ENST00000580621 CCDC17Q96LX7 622 aa22.69■■□□□ 1.22
KRT16P3-203ENST00000580621 GMLQ99445 158 aa22.69■■□□□ 1.22
KRT16P3-203ENST00000580621 CEP131Q9UPN4 1083 aa22.69■■□□□ 1.22
KRT16P3-203ENST00000580621 SMARCA1P28370 1054 aa22.69■■□□□ 1.22
KRT16P3-203ENST00000580621 DALRD3Q5D0E6 543 aaKnown RBP22.69■■□□□ 1.22
KRT16P3-203ENST00000580621 RESP18Q5W5W9 173 aa22.69■■□□□ 1.22
KRT16P3-203ENST00000580621 CLEC10AQ8IUN9 316 aa22.69■■□□□ 1.22
KRT16P3-203ENST00000580621 CLIC6Q96NY7 704 aa22.69■■□□□ 1.22
KRT16P3-203ENST00000580621 NOL7Q9UMY1 257 aaKnown RBP22.69■■□□□ 1.22
KRT16P3-203ENST00000580621 FAM237AA0A1B0GTK4 181 aa22.68■■□□□ 1.22
KRT16P3-203ENST00000580621 TRIM75PA6NK02 468 aa22.68■■□□□ 1.22
KRT16P3-203ENST00000580621 ENTPD3O75355 529 aa22.68■■□□□ 1.22
KRT16P3-203ENST00000580621 SLURP2P0DP57 97 aa22.68■■□□□ 1.22
KRT16P3-203ENST00000580621 ATP2B1P20020 1258 aa22.68■■□□□ 1.22
KRT16P3-203ENST00000580621 CLCN1P35523 988 aa22.68■■□□□ 1.22
KRT16P3-203ENST00000580621 EIF6P56537 245 aaKnown RBP22.68■■□□□ 1.22
KRT16P3-203ENST00000580621 NIM1KQ8IY84 436 aa22.68■■□□□ 1.22
KRT16P3-203ENST00000580621 LRRC47Q8N1G4 583 aaKnown RBP22.68■■□□□ 1.22
KRT16P3-203ENST00000580621 CLIP2Q9UDT6 1046 aa22.68■■□□□ 1.22
KRT16P3-203ENST00000580621 ZNRF3Q9ULT6 936 aa22.68■■□□□ 1.22
KRT16P3-203ENST00000580621 FER1L6Q2WGJ9 1857 aa22.68■■□□□ 1.22
KRT16P3-203ENST00000580621 MPHOSPH10O00566 681 aaKnown RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms