RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 VCPKMTQ9H867 229 aa24.01■■□□□ 1.43
SMG8-204ENST00000580498 RBPJLQ9UBG7 517 aa24.01■■□□□ 1.43
SMG8-204ENST00000580498 SUPT16HQ9Y5B9 1047 aaKnown RBP24.01■■□□□ 1.43
SMG8-204ENST00000580498 WDR46O15213 610 aaKnown RBP24■■□□□ 1.43
SMG8-204ENST00000580498 RAD21O60216 631 aa24■■□□□ 1.43
SMG8-204ENST00000580498 ELNP15502 786 aa24■■□□□ 1.43
SMG8-204ENST00000580498 MTFR1Q15390 333 aa24■■□□□ 1.43
SMG8-204ENST00000580498 PLEKHH3Q7Z736 793 aa24■■□□□ 1.43
SMG8-204ENST00000580498 IFNL3Q8IZI9 196 aa24■■□□□ 1.43
SMG8-204ENST00000580498 MB21D1Q8N884 522 aa24■■□□□ 1.43
SMG8-204ENST00000580498 SALL3Q9BXA9 1300 aa24■■□□□ 1.43
SMG8-204ENST00000580498 ROBO3Q96MS0 1386 aa24■■□□□ 1.43
SMG8-204ENST00000580498 DOCK3Q8IZD9 2030 aa24■■□□□ 1.43
SMG8-204ENST00000580498 RGS2P41220 211 aa23.99■■□□□ 1.43
SMG8-204ENST00000580498 PPP4R3BQ5MIZ7 849 aa23.99■■□□□ 1.43
SMG8-204ENST00000580498 PRPF38BQ5VTL8 546 aaKnown RBP23.99■■□□□ 1.43
SMG8-204ENST00000580498 CHD1LQ86WJ1 897 aa23.99■■□□□ 1.43
SMG8-204ENST00000580498 TXNRD2Q9NNW7 524 aa23.99■■□□□ 1.43
SMG8-204ENST00000580498 HTTP42858 3142 aa23.99■■□□□ 1.43
SMG8-204ENST00000580498 A0A1W2PRG0 241 aa23.98■■□□□ 1.43
SMG8-204ENST00000580498 FLOT1O75955 427 aa23.98■■□□□ 1.43
SMG8-204ENST00000580498 EEF2P13639 858 aaKnown RBP23.98■■□□□ 1.43
SMG8-204ENST00000580498 GPR142Q7Z601 462 aa23.98■■□□□ 1.43
SMG8-204ENST00000580498 STK11IPQ8N1F8 1099 aa23.98■■□□□ 1.43
SMG8-204ENST00000580498 HELLSQ9NRZ9 838 aa23.98■■□□□ 1.43
SMG8-204ENST00000580498 SPDYE16A6NNV3 312 aaPredicted RBP23.97■■□□□ 1.43
SMG8-204ENST00000580498 XRCC5P13010 732 aaKnown RBP23.97■■□□□ 1.43
SMG8-204ENST00000580498 CYP2B6P20813 491 aa23.97■■□□□ 1.43
SMG8-204ENST00000580498 GJA8P48165 433 aa23.97■■□□□ 1.43
SMG8-204ENST00000580498 MFAP1P55081 439 aaKnown RBP23.97■■□□□ 1.43
SMG8-204ENST00000580498 RILPL2Q969X0 211 aa23.97■■□□□ 1.43
SMG8-204ENST00000580498 ZKSCAN1P17029 563 aaPredicted RBP23.96■■□□□ 1.43
SMG8-204ENST00000580498 SPICE1Q8N0Z3 855 aa23.96■■□□□ 1.43
SMG8-204ENST00000580498 SEC62Q99442 399 aaKnown RBP23.96■■□□□ 1.43
SMG8-204ENST00000580498 UNC93B1Q9H1C4 597 aa23.96■■□□□ 1.43
SMG8-204ENST00000580498 EPB41L4AQ9HCS5 686 aaPredicted RBP23.96■■□□□ 1.43
SMG8-204ENST00000580498 GJD2Q9UKL4 321 aa23.96■■□□□ 1.43
SMG8-204ENST00000580498 TSPY3P0CV98 308 aa23.95■■□□□ 1.42
SMG8-204ENST00000580498 TSPY8P0CW00 308 aa23.95■■□□□ 1.42
SMG8-204ENST00000580498 RASA1P20936 1047 aa23.95■■□□□ 1.42
SMG8-204ENST00000580498 NUCB1Q02818 461 aa23.95■■□□□ 1.42
SMG8-204ENST00000580498 Q3C1V9 767 aa23.95■■□□□ 1.42
SMG8-204ENST00000580498 SAMD1Q6SPF0 538 aaPredicted RBP23.95■■□□□ 1.42
SMG8-204ENST00000580498 APBA2Q99767 749 aa23.95■■□□□ 1.42
SMG8-204ENST00000580498 HMX1Q9NP08 348 aaPredicted RBP23.95■■□□□ 1.42
SMG8-204ENST00000580498 SLC5A4Q9NY91 659 aa23.95■■□□□ 1.42
SMG8-204ENST00000580498 TFRCP02786 760 aaKnown RBP23.94■■□□□ 1.42
SMG8-204ENST00000580498 PPARAQ07869 468 aa23.94■■□□□ 1.42
SMG8-204ENST00000580498 PLS1Q14651 629 aa23.94■■□□□ 1.42
SMG8-204ENST00000580498 MCMDC2Q4G0Z9 681 aa23.94■■□□□ 1.42
SMG8-204ENST00000580498 CLEC10AQ8IUN9 316 aa23.94■■□□□ 1.42
SMG8-204ENST00000580498 U2AF1L4Q8WU68 220 aaKnown RBP23.94■■□□□ 1.42
SMG8-204ENST00000580498 PORCNQ9H237 461 aa23.94■■□□□ 1.42
SMG8-204ENST00000580498 NYAP2Q9P242 653 aa23.94■■□□□ 1.42
SMG8-204ENST00000580498 CTDP1Q9Y5B0 961 aaPredicted RBP23.94■■□□□ 1.42
SMG8-204ENST00000580498 RPTORQ8N122 1335 aa23.93■■□□□ 1.42
SMG8-204ENST00000580498 SLC15A5A6NIM6 579 aa23.93■■□□□ 1.42
SMG8-204ENST00000580498 SGPL1O95470 568 aa23.93■■□□□ 1.42
SMG8-204ENST00000580498 DSG3P32926 999 aa23.93■■□□□ 1.42
SMG8-204ENST00000580498 HTATIP2Q9BUP3 242 aa23.93■■□□□ 1.42
SMG8-204ENST00000580498 HIP1O00291 1037 aa23.92■■□□□ 1.42
SMG8-204ENST00000580498 STRNO43815 780 aa23.92■■□□□ 1.42
SMG8-204ENST00000580498 MAP2K5Q13163 448 aa23.92■■□□□ 1.42
SMG8-204ENST00000580498 SHCBP1Q8NEM2 672 aa23.92■■□□□ 1.42
SMG8-204ENST00000580498 DEFB118Q96PH6 123 aa23.92■■□□□ 1.42
SMG8-204ENST00000580498 SPATC1LQ9H0A9 340 aa23.92■■□□□ 1.42
SMG8-204ENST00000580498 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.92■■□□□ 1.42
SMG8-204ENST00000580498 SYNPO2Q9UMS6 1093 aa23.92■■□□□ 1.42
SMG8-204ENST00000580498 SMIM22K7EJ46 135 aa23.91■■□□□ 1.42
SMG8-204ENST00000580498 CNMDO75829 334 aa23.91■■□□□ 1.42
SMG8-204ENST00000580498 TTLL1O95922 423 aa23.91■■□□□ 1.42
SMG8-204ENST00000580498 COPB2P35606 906 aa23.91■■□□□ 1.42
SMG8-204ENST00000580498 MFSD14CQ5VZR4 134 aa23.91■■□□□ 1.42
SMG8-204ENST00000580498 MROH8Q9H579 483 aa23.91■■□□□ 1.42
SMG8-204ENST00000580498 BTBD7Q9P203 1132 aa23.91■■□□□ 1.42
SMG8-204ENST00000580498 CENPFP49454 3210 aa23.9■■□□□ 1.42
SMG8-204ENST00000580498 PEX10O60683 326 aa23.9■■□□□ 1.42
SMG8-204ENST00000580498 PRDM1O75626 825 aa23.9■■□□□ 1.42
SMG8-204ENST00000580498 FARP2O94887 1054 aaPredicted RBP23.9■■□□□ 1.42
SMG8-204ENST00000580498 SLC25A27O95847 323 aa23.9■■□□□ 1.42
SMG8-204ENST00000580498 IGHDP01880 384 aa23.9■■□□□ 1.42
SMG8-204ENST00000580498 PTPREP23469 700 aa23.9■■□□□ 1.42
SMG8-204ENST00000580498 MORN1Q5T089 497 aa23.9■■□□□ 1.42
SMG8-204ENST00000580498 DPP9Q86TI2 863 aa23.9■■□□□ 1.42
SMG8-204ENST00000580498 SIAH1Q8IUQ4 282 aa23.9■■□□□ 1.42
SMG8-204ENST00000580498 OSBPL3Q9H4L5 887 aa23.9■■□□□ 1.42
SMG8-204ENST00000580498 CLIP2Q9UDT6 1046 aa23.9■■□□□ 1.42
SMG8-204ENST00000580498 TSPY2A6NKD2 308 aa23.89■■□□□ 1.41
SMG8-204ENST00000580498 CCDC129Q6ZRS4 1044 aa23.89■■□□□ 1.41
SMG8-204ENST00000580498 NCAPG2Q86XI2 1143 aa23.89■■□□□ 1.41
SMG8-204ENST00000580498 TRIB2Q92519 343 aa23.89■■□□□ 1.41
SMG8-204ENST00000580498 PAK6Q9NQU5 681 aaPredicted RBP23.89■■□□□ 1.41
SMG8-204ENST00000580498 DIAPH3Q9NSV4 1193 aa23.89■■□□□ 1.41
SMG8-204ENST00000580498 PRKAR2AP13861 404 aaKnown RBP23.88■■□□□ 1.41
SMG8-204ENST00000580498 TFAP4Q01664 338 aa23.88■■□□□ 1.41
SMG8-204ENST00000580498 FAM83BQ5T0W9 1011 aa23.88■■□□□ 1.41
SMG8-204ENST00000580498 PLEKHM2Q8IWE5 1019 aa23.88■■□□□ 1.41
SMG8-204ENST00000580498 NEDD1Q8NHV4 660 aa23.88■■□□□ 1.41
SMG8-204ENST00000580498 ATG4CQ96DT6 458 aa23.88■■□□□ 1.41
SMG8-204ENST00000580498 MOV10L1Q9BXT6 1211 aaKnown RBP23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms