RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 TSPY3P0CV98 308 aa12.96□□□□□ -0.33
NDEL1-208ENST00000580237 TSPY8P0CW00 308 aa12.96□□□□□ -0.33
NDEL1-208ENST00000580237 EEF2P13639 858 aaKnown RBP12.96□□□□□ -0.33
NDEL1-208ENST00000580237 SDSP20132 328 aa12.96□□□□□ -0.33
NDEL1-208ENST00000580237 SPICE1Q8N0Z3 855 aa12.96□□□□□ -0.33
NDEL1-208ENST00000580237 GPRC5AQ8NFJ5 357 aa12.96□□□□□ -0.33
NDEL1-208ENST00000580237 SH3TC2Q8TF17 1288 aa12.96□□□□□ -0.33
NDEL1-208ENST00000580237 ARMC5Q96C12 935 aa12.96□□□□□ -0.33
NDEL1-208ENST00000580237 TMEM106CQ9BVX2 250 aa12.96□□□□□ -0.33
NDEL1-208ENST00000580237 TOMM22Q9NS69 142 aa12.96□□□□□ -0.33
NDEL1-208ENST00000580237 NEFLP07196 543 aa12.95□□□□□ -0.34
NDEL1-208ENST00000580237 GRK4P32298 578 aa12.95□□□□□ -0.34
NDEL1-208ENST00000580237 FLT3LGP49771 235 aa12.95□□□□□ -0.34
NDEL1-208ENST00000580237 ERVK-9P63128 1117 aa12.95□□□□□ -0.34
NDEL1-208ENST00000580237 ERVK-24P63145 666 aa12.95□□□□□ -0.34
NDEL1-208ENST00000580237 CCNA1P78396 465 aa12.95□□□□□ -0.34
NDEL1-208ENST00000580237 MLLT1Q03111 559 aaPredicted RBP12.95□□□□□ -0.34
NDEL1-208ENST00000580237 TTC22Q5TAA0 569 aa12.95□□□□□ -0.34
NDEL1-208ENST00000580237 VPS53Q5VIR6 699 aa12.95□□□□□ -0.34
NDEL1-208ENST00000580237 WDR78Q5VTH9 848 aa12.95□□□□□ -0.34
NDEL1-208ENST00000580237 CWC27Q6UX04 472 aaKnown RBP12.95□□□□□ -0.34
NDEL1-208ENST00000580237 CATSPERGQ6ZRH7 1159 aa12.95□□□□□ -0.34
NDEL1-208ENST00000580237 ZNF589Q86UQ0 364 aaPredicted RBP12.95□□□□□ -0.34
NDEL1-208ENST00000580237 VCPKMTQ9H867 229 aa12.95□□□□□ -0.34
NDEL1-208ENST00000580237 MORF4L1Q9UBU8 362 aa12.95□□□□□ -0.34
NDEL1-208ENST00000580237 ISY1Q9ULR0 285 aaKnown RBP12.95□□□□□ -0.34
NDEL1-208ENST00000580237 TMX2Q9Y320 296 aa12.95□□□□□ -0.34
NDEL1-208ENST00000580237 TSPY2A6NKD2 308 aa12.94□□□□□ -0.34
NDEL1-208ENST00000580237 WDR46O15213 610 aaKnown RBP12.94□□□□□ -0.34
NDEL1-208ENST00000580237 FLOT1O75955 427 aa12.94□□□□□ -0.34
NDEL1-208ENST00000580237 PDE4AP27815 886 aa12.94□□□□□ -0.34
NDEL1-208ENST00000580237 MAPK4P31152 587 aa12.94□□□□□ -0.34
NDEL1-208ENST00000580237 CTDSPL2Q05D32 466 aa12.94□□□□□ -0.34
NDEL1-208ENST00000580237 SLAIN1Q8ND83 568 aa12.94□□□□□ -0.34
NDEL1-208ENST00000580237 ZNF333Q96JL9 665 aa12.94□□□□□ -0.34
NDEL1-208ENST00000580237 TXNRD2Q9NNW7 524 aa12.94□□□□□ -0.34
NDEL1-208ENST00000580237 GABRQQ9UN88 632 aa12.94□□□□□ -0.34
NDEL1-208ENST00000580237 PLIN4Q96Q06 1357 aa12.94□□□□□ -0.34
NDEL1-208ENST00000580237 ZMYM6O95789 1325 aa12.93□□□□□ -0.34
NDEL1-208ENST00000580237 SPDYE16A6NNV3 312 aaPredicted RBP12.93□□□□□ -0.34
NDEL1-208ENST00000580237 FOXP2O15409 715 aa12.93□□□□□ -0.34
NDEL1-208ENST00000580237 ADCY3O60266 1144 aa12.93□□□□□ -0.34
NDEL1-208ENST00000580237 PEX10O60683 326 aa12.93□□□□□ -0.34
NDEL1-208ENST00000580237 HSPD1P10809 573 aaKnown RBP12.93□□□□□ -0.34
NDEL1-208ENST00000580237 UBXN2AP68543 259 aa12.93□□□□□ -0.34
NDEL1-208ENST00000580237 RRP12Q5JTH9 1297 aaKnown RBP12.93□□□□□ -0.34
NDEL1-208ENST00000580237 SOCS4Q8WXH5 440 aa12.93□□□□□ -0.34
NDEL1-208ENST00000580237 RABGAP1Q9Y3P9 1069 aa12.93□□□□□ -0.34
NDEL1-208ENST00000580237 RANBP6O60518 1105 aaKnown RBP12.92□□□□□ -0.34
NDEL1-208ENST00000580237 TTLL1O95922 423 aa12.92□□□□□ -0.34
NDEL1-208ENST00000580237 ELNP15502 786 aa12.92□□□□□ -0.34
NDEL1-208ENST00000580237 HAND2P61296 217 aa12.92□□□□□ -0.34
NDEL1-208ENST00000580237 TFAP4Q01664 338 aa12.92□□□□□ -0.34
NDEL1-208ENST00000580237 PLS1Q14651 629 aa12.92□□□□□ -0.34
NDEL1-208ENST00000580237 COG2Q14746 738 aa12.92□□□□□ -0.34
NDEL1-208ENST00000580237 FAM47AQ5JRC9 791 aa12.92□□□□□ -0.34
NDEL1-208ENST00000580237 PPP4R3BQ5MIZ7 849 aa12.92□□□□□ -0.34
NDEL1-208ENST00000580237 FAM83BQ5T0W9 1011 aa12.92□□□□□ -0.34
NDEL1-208ENST00000580237 PDE4DIPQ5VU43 2346 aa12.92□□□□□ -0.34
NDEL1-208ENST00000580237 LRRC47Q8N1G4 583 aaKnown RBP12.92□□□□□ -0.34
NDEL1-208ENST00000580237 CEP95Q96GE4 821 aa12.92□□□□□ -0.34
NDEL1-208ENST00000580237 NUDT12Q9BQG2 462 aa12.92□□□□□ -0.34
NDEL1-208ENST00000580237 HOXC10Q9NYD6 342 aa12.92□□□□□ -0.34
NDEL1-208ENST00000580237 NYAP2Q9P242 653 aa12.92□□□□□ -0.34
NDEL1-208ENST00000580237 RBPJLQ9UBG7 517 aa12.92□□□□□ -0.34
NDEL1-208ENST00000580237 CLIP2Q9UDT6 1046 aa12.92□□□□□ -0.34
NDEL1-208ENST00000580237 IVNS1ABPQ9Y6Y0 642 aa12.92□□□□□ -0.34
NDEL1-208ENST00000580237 ZNF236Q9UL36 1845 aa12.91□□□□□ -0.34
NDEL1-208ENST00000580237 GSPT1P15170 499 aaKnown RBP12.91□□□□□ -0.34
NDEL1-208ENST00000580237 IRF5Q13568 498 aa12.91□□□□□ -0.34
NDEL1-208ENST00000580237 ALX1Q15699 326 aa12.91□□□□□ -0.34
NDEL1-208ENST00000580237 KIAA1755Q5JYT7 1200 aa12.91□□□□□ -0.34
NDEL1-208ENST00000580237 LBX2Q6XYB7 198 aa12.91□□□□□ -0.34
NDEL1-208ENST00000580237 CENPQQ7L2Z9 268 aaPredicted RBP12.91□□□□□ -0.34
NDEL1-208ENST00000580237 SIAH1Q8IUQ4 282 aa12.91□□□□□ -0.34
NDEL1-208ENST00000580237 MB21D1Q8N884 522 aa12.91□□□□□ -0.34
NDEL1-208ENST00000580237 NEDD1Q8NHV4 660 aa12.91□□□□□ -0.34
NDEL1-208ENST00000580237 RUFY2Q8WXA3 655 aa12.91□□□□□ -0.34
NDEL1-208ENST00000580237 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.91□□□□□ -0.34
NDEL1-208ENST00000580237 PORCNQ9H237 461 aa12.91□□□□□ -0.34
NDEL1-208ENST00000580237 STX8Q9UNK0 236 aa12.91□□□□□ -0.34
NDEL1-208ENST00000580237 ZNFX1Q9P2E3 1918 aaKnown RBP12.91□□□□□ -0.34
NDEL1-208ENST00000580237 PLXNA1Q9UIW2 1896 aa12.91□□□□□ -0.34
NDEL1-208ENST00000580237 HTTP42858 3142 aa12.91□□□□□ -0.34
NDEL1-208ENST00000580237 RAD50Q92878 1312 aa12.9□□□□□ -0.34
NDEL1-208ENST00000580237 POTEFA5A3E0 1075 aa12.9□□□□□ -0.34
NDEL1-208ENST00000580237 NDUFB10O96000 172 aa12.9□□□□□ -0.34
NDEL1-208ENST00000580237 FGAP02671 866 aa12.9□□□□□ -0.34
NDEL1-208ENST00000580237 INHAP05111 366 aa12.9□□□□□ -0.34
NDEL1-208ENST00000580237 GPR142Q7Z601 462 aa12.9□□□□□ -0.34
NDEL1-208ENST00000580237 PLEKHH3Q7Z736 793 aa12.9□□□□□ -0.34
NDEL1-208ENST00000580237 PXYLP1Q8TE99 480 aa12.9□□□□□ -0.34
NDEL1-208ENST00000580237 ATG4CQ96DT6 458 aa12.9□□□□□ -0.34
NDEL1-208ENST00000580237 RNF41Q9H4P4 317 aaPredicted RBP12.9□□□□□ -0.34
NDEL1-208ENST00000580237 MTMR4Q9NYA4 1195 aa12.9□□□□□ -0.34
NDEL1-208ENST00000580237 ANAPC4Q9UJX5 808 aa12.9□□□□□ -0.34
NDEL1-208ENST00000580237 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.9□□□□□ -0.34
NDEL1-208ENST00000580237 CTDP1Q9Y5B0 961 aaPredicted RBP12.9□□□□□ -0.34
NDEL1-208ENST00000580237 IGKV6D-41A0A0C4DH26 115 aa12.89□□□□□ -0.35
NDEL1-208ENST00000580237 F5H6K3 240 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms