RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 MSCO60682 206 aa16.45■□□□□ 0.22
GGA3-208ENST00000579743 FLOT1O75955 427 aa16.45■□□□□ 0.22
GGA3-208ENST00000579743 CYP2D6P10635 497 aa16.45■□□□□ 0.22
GGA3-208ENST00000579743 FXR1P51114 621 aaKnown RBP eCLIP16.45■□□□□ 0.22
GGA3-208ENST00000579743 CACNB2Q08289 660 aaPredicted RBP16.45■□□□□ 0.22
GGA3-208ENST00000579743 TRIM32Q13049 653 aa16.45■□□□□ 0.22
GGA3-208ENST00000579743 DPP9Q86TI2 863 aa16.45■□□□□ 0.22
GGA3-208ENST00000579743 DYNLL2Q96FJ2 89 aa16.45■□□□□ 0.22
GGA3-208ENST00000579743 DCTPP1Q9H773 170 aa16.45■□□□□ 0.22
GGA3-208ENST00000579743 GOPCQ9HD26 462 aa16.45■□□□□ 0.22
GGA3-208ENST00000579743 TMX2Q9Y320 296 aa16.45■□□□□ 0.22
GGA3-208ENST00000579743 A0A1W2PPC1 479 aa16.44■□□□□ 0.22
GGA3-208ENST00000579743 GNAT2P19087 354 aa16.44■□□□□ 0.22
GGA3-208ENST00000579743 PLS1Q14651 629 aa16.44■□□□□ 0.22
GGA3-208ENST00000579743 GIMAP6Q6P9H5 292 aa16.44■□□□□ 0.22
GGA3-208ENST00000579743 C16orf86Q6ZW13 317 aa16.44■□□□□ 0.22
GGA3-208ENST00000579743 KBTBD3Q8NAB2 608 aa16.44■□□□□ 0.22
GGA3-208ENST00000579743 SLC44A5Q8NCS7 719 aa16.44■□□□□ 0.22
GGA3-208ENST00000579743 SHCBP1Q8NEM2 672 aa16.44■□□□□ 0.22
GGA3-208ENST00000579743 MROH8Q9H579 483 aa16.44■□□□□ 0.22
GGA3-208ENST00000579743 VCPKMTQ9H867 229 aa16.44■□□□□ 0.22
GGA3-208ENST00000579743 MKNK2Q9HBH9 465 aa16.44■□□□□ 0.22
GGA3-208ENST00000579743 BTBD7Q9P203 1132 aa16.44■□□□□ 0.22
GGA3-208ENST00000579743 DDX60LQ5H9U9 1706 aaKnown RBP16.44■□□□□ 0.22
GGA3-208ENST00000579743 A0A1W2PRG0 241 aa16.43■□□□□ 0.22
GGA3-208ENST00000579743 WDR46O15213 610 aaKnown RBP16.43■□□□□ 0.22
GGA3-208ENST00000579743 RAD21O60216 631 aa16.43■□□□□ 0.22
GGA3-208ENST00000579743 CNMDO75829 334 aa16.43■□□□□ 0.22
GGA3-208ENST00000579743 AKR1B1P15121 316 aa16.43■□□□□ 0.22
GGA3-208ENST00000579743 CNGA1P29973 690 aa16.43■□□□□ 0.22
GGA3-208ENST00000579743 CEP290O15078 2479 aa16.42■□□□□ 0.22
GGA3-208ENST00000579743 RNF113AO15541 343 aaKnown RBP16.42■□□□□ 0.22
GGA3-208ENST00000579743 HOXC6P09630 235 aa16.42■□□□□ 0.22
GGA3-208ENST00000579743 DSG3P32926 999 aa16.42■□□□□ 0.22
GGA3-208ENST00000579743 GRB14Q14449 540 aa16.42■□□□□ 0.22
GGA3-208ENST00000579743 CCL14Q16627 93 aa16.42■□□□□ 0.22
GGA3-208ENST00000579743 CTR9Q6PD62 1173 aa16.42■□□□□ 0.22
GGA3-208ENST00000579743 SAMD1Q6SPF0 538 aaPredicted RBP16.42■□□□□ 0.22
GGA3-208ENST00000579743 DIS3LQ8TF46 1054 aaKnown RBP16.42■□□□□ 0.22
GGA3-208ENST00000579743 APPBP2Q92624 585 aa16.42■□□□□ 0.22
GGA3-208ENST00000579743 NACAP1Q9BZK3 213 aa16.42■□□□□ 0.22
GGA3-208ENST00000579743 SPATC1LQ9H0A9 340 aa16.42■□□□□ 0.22
GGA3-208ENST00000579743 PUS7LQ9H0K6 701 aaKnown RBP16.42■□□□□ 0.22
GGA3-208ENST00000579743 RBM27Q9P2N5 1060 aaKnown RBP16.42■□□□□ 0.22
GGA3-208ENST00000579743 MYH8P13535 1937 aa16.42■□□□□ 0.22
GGA3-208ENST00000579743 PLXNB2O15031 1838 aa16.41■□□□□ 0.22
GGA3-208ENST00000579743 SLC25A27O95847 323 aa16.41■□□□□ 0.22
GGA3-208ENST00000579743 APPP05067 770 aa16.41■□□□□ 0.22
GGA3-208ENST00000579743 SLFNL1Q499Z3 407 aa16.41■□□□□ 0.22
GGA3-208ENST00000579743 SBK1Q52WX2 424 aa16.41■□□□□ 0.22
GGA3-208ENST00000579743 NCAPG2Q86XI2 1143 aa16.41■□□□□ 0.22
GGA3-208ENST00000579743 C7orf61Q8IZ16 206 aa16.41■□□□□ 0.22
GGA3-208ENST00000579743 SPICE1Q8N0Z3 855 aa16.41■□□□□ 0.22
GGA3-208ENST00000579743 STRBPQ96SI9 672 aaKnown RBP16.41■□□□□ 0.22
GGA3-208ENST00000579743 MOV10L1Q9BXT6 1211 aaKnown RBP16.41■□□□□ 0.22
GGA3-208ENST00000579743 TTC41PQ6P2S7 1318 aa16.41■□□□□ 0.22
GGA3-208ENST00000579743 MYH7P12883 1935 aa16.41■□□□□ 0.22
GGA3-208ENST00000579743 CYP2D7A0A087X1C5 515 aa16.4■□□□□ 0.22
GGA3-208ENST00000579743 MINDY4BA8MYZ0 360 aa16.4■□□□□ 0.22
GGA3-208ENST00000579743 SLC3A2P08195 630 aaKnown RBP16.4■□□□□ 0.22
GGA3-208ENST00000579743 FCER1AP12319 257 aa16.4■□□□□ 0.22
GGA3-208ENST00000579743 EEF2P13639 858 aaKnown RBP16.4■□□□□ 0.22
GGA3-208ENST00000579743 ERCC3P19447 782 aa16.4■□□□□ 0.22
GGA3-208ENST00000579743 CCND3P30281 292 aaPredicted RBP16.4■□□□□ 0.22
GGA3-208ENST00000579743 COPB2P35606 906 aa16.4■□□□□ 0.22
GGA3-208ENST00000579743 TDO2P48775 406 aa16.4■□□□□ 0.22
GGA3-208ENST00000579743 EVX2Q03828 476 aa16.4■□□□□ 0.22
GGA3-208ENST00000579743 POTEEQ6S8J3 1075 aa16.4■□□□□ 0.22
GGA3-208ENST00000579743 ABRAQ8N0Z2 381 aa16.4■□□□□ 0.22
GGA3-208ENST00000579743 CTDP1Q9Y5B0 961 aaPredicted RBP16.4■□□□□ 0.22
GGA3-208ENST00000579743 ADORA2AP29274 412 aa16.39■□□□□ 0.21
GGA3-208ENST00000579743 OLFML2BQ68BL8 750 aa16.39■□□□□ 0.21
GGA3-208ENST00000579743 ZNF444Q8N0Y2 327 aaPredicted RBP16.39■□□□□ 0.21
GGA3-208ENST00000579743 ARRDC4Q8NCT1 418 aa16.39■□□□□ 0.21
GGA3-208ENST00000579743 DDX20Q9UHI6 824 aaKnown RBP16.39■□□□□ 0.21
GGA3-208ENST00000579743 BAZ2AQ9UIF9 1905 aaKnown RBP16.39■□□□□ 0.21
GGA3-208ENST00000579743 BRCA2P51587 3418 aa16.38■□□□□ 0.21
GGA3-208ENST00000579743 LHX8Q68G74 356 aa16.38■□□□□ 0.21
GGA3-208ENST00000579743 ATG4CQ96DT6 458 aa16.38■□□□□ 0.21
GGA3-208ENST00000579743 STAP2Q9UGK3 403 aa16.38■□□□□ 0.21
GGA3-208ENST00000579743 MKI67P46013 3256 aaKnown RBP16.37■□□□□ 0.21
GGA3-208ENST00000579743 GSG1L2A8MUP6 293 aa16.37■□□□□ 0.21
GGA3-208ENST00000579743 GPAA1O43292 621 aa16.37■□□□□ 0.21
GGA3-208ENST00000579743 CYP2C19P33261 490 aa16.37■□□□□ 0.21
GGA3-208ENST00000579743 KCTD2Q14681 263 aa16.37■□□□□ 0.21
GGA3-208ENST00000579743 PPP4R3BQ5MIZ7 849 aa16.37■□□□□ 0.21
GGA3-208ENST00000579743 CLEC10AQ8IUN9 316 aa16.37■□□□□ 0.21
GGA3-208ENST00000579743 SIAH1Q8IUQ4 282 aa16.37■□□□□ 0.21
GGA3-208ENST00000579743 NPLOC4Q8TAT6 608 aa16.37■□□□□ 0.21
GGA3-208ENST00000579743 FSD1Q9BTV5 496 aa16.37■□□□□ 0.21
GGA3-208ENST00000579743 PATL2C9JE40 543 aaKnown RBP16.36■□□□□ 0.21
GGA3-208ENST00000579743 KBTBD13C9JR72 458 aa16.36■□□□□ 0.21
GGA3-208ENST00000579743 BMP8BP34820 402 aa16.36■□□□□ 0.21
GGA3-208ENST00000579743 PDE4BQ07343 736 aa16.36■□□□□ 0.21
GGA3-208ENST00000579743 OSBP2Q969R2 916 aa16.36■□□□□ 0.21
GGA3-208ENST00000579743 MMP19Q99542 508 aa16.36■□□□□ 0.21
GGA3-208ENST00000579743 FLRT1Q9NZU1 646 aa16.36■□□□□ 0.21
GGA3-208ENST00000579743 NYAP2Q9P242 653 aa16.36■□□□□ 0.21
GGA3-208ENST00000579743 PRKAG2Q9UGJ0 569 aa16.36■□□□□ 0.21
GGA3-208ENST00000579743 ZMYND8Q9ULU4 1186 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms