RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 PQBP1O60828 265 aaKnown RBP17.05■□□□□ 0.32
CSNK1D-211ENST00000579316 PBX2P40425 430 aa17.05■□□□□ 0.32
CSNK1D-211ENST00000579316 FAAP100Q0VG06 881 aa17.05■□□□□ 0.32
CSNK1D-211ENST00000579316 ZYXQ15942 572 aaKnown RBP17.05■□□□□ 0.32
CSNK1D-211ENST00000579316 TATDN1Q6P1N9 297 aa17.05■□□□□ 0.32
CSNK1D-211ENST00000579316 ATF7IPQ6VMQ6 1270 aa17.05■□□□□ 0.32
CSNK1D-211ENST00000579316 ABRAQ8N0Z2 381 aa17.05■□□□□ 0.32
CSNK1D-211ENST00000579316 XPNPEP3Q9NQH7 507 aa17.05■□□□□ 0.32
CSNK1D-211ENST00000579316 AATFQ9NY61 560 aaKnown RBP eCLIP17.05■□□□□ 0.32
CSNK1D-211ENST00000579316 SLC5A4Q9NY91 659 aa17.05■□□□□ 0.32
CSNK1D-211ENST00000579316 HCN4Q9Y3Q4 1203 aa17.05■□□□□ 0.32
CSNK1D-211ENST00000579316 REV3LO60673 3130 aa17.04■□□□□ 0.32
CSNK1D-211ENST00000579316 A0A1W2PQ45 241 aaPredicted RBP17.04■□□□□ 0.32
CSNK1D-211ENST00000579316 A0A1W2PQY0 241 aa17.04■□□□□ 0.32
CSNK1D-211ENST00000579316 HLA-DOAP06340 250 aa17.04■□□□□ 0.32
CSNK1D-211ENST00000579316 BMP1P13497 986 aa17.04■□□□□ 0.32
CSNK1D-211ENST00000579316 TFCP2Q12800 502 aa17.04■□□□□ 0.32
CSNK1D-211ENST00000579316 PRAMEF19Q5SWL8 479 aa17.04■□□□□ 0.32
CSNK1D-211ENST00000579316 RNF180Q86T96 592 aa17.04■□□□□ 0.32
CSNK1D-211ENST00000579316 NECAB3Q96P71 396 aaPredicted RBP17.04■□□□□ 0.32
CSNK1D-211ENST00000579316 TBX21Q9UL17 535 aa17.04■□□□□ 0.32
CSNK1D-211ENST00000579316 SMCHD1A6NHR9 2005 aa17.04■□□□□ 0.32
CSNK1D-211ENST00000579316 TIMP1P01033 207 aa17.03■□□□□ 0.32
CSNK1D-211ENST00000579316 RARBP10826 455 aa17.03■□□□□ 0.32
CSNK1D-211ENST00000579316 CCDC174Q6PII3 467 aa17.03■□□□□ 0.32
CSNK1D-211ENST00000579316 C16orf59Q7L2K0 433 aa17.03■□□□□ 0.32
CSNK1D-211ENST00000579316 SLC44A5Q8NCS7 719 aa17.03■□□□□ 0.32
CSNK1D-211ENST00000579316 ACER1Q8TDN7 264 aa17.03■□□□□ 0.32
CSNK1D-211ENST00000579316 SSH1Q8WYL5 1049 aa17.03■□□□□ 0.32
CSNK1D-211ENST00000579316 MAML3Q96JK9 1138 aa17.03■□□□□ 0.32
CSNK1D-211ENST00000579316 SPATC1LQ9H0A9 340 aa17.03■□□□□ 0.32
CSNK1D-211ENST00000579316 RPAP3Q9H6T3 665 aaPredicted RBP17.03■□□□□ 0.32
CSNK1D-211ENST00000579316 LRP2BPQ9P2M1 347 aa17.03■□□□□ 0.32
CSNK1D-211ENST00000579316 HDAC5Q9UQL6 1122 aa17.03■□□□□ 0.32
CSNK1D-211ENST00000579316 GRXCR1A8MXD5 290 aa17.02■□□□□ 0.32
CSNK1D-211ENST00000579316 ERCC3P19447 782 aa17.02■□□□□ 0.32
CSNK1D-211ENST00000579316 MCAMP43121 646 aa17.02■□□□□ 0.32
CSNK1D-211ENST00000579316 PPIGQ13427 754 aaKnown RBP eCLIP17.02■□□□□ 0.326e-22■■■■□ 20.1
CSNK1D-211ENST00000579316 CCDC85BQ15834 202 aaPredicted RBP17.02■□□□□ 0.32
CSNK1D-211ENST00000579316 TMEM240Q5SV17 173 aa17.02■□□□□ 0.32
CSNK1D-211ENST00000579316 NAA16Q6N069 864 aaPredicted RBP17.02■□□□□ 0.32
CSNK1D-211ENST00000579316 MFSD5Q6N075 450 aa17.02■□□□□ 0.32
CSNK1D-211ENST00000579316 ADGRA1Q86SQ6 560 aa17.02■□□□□ 0.32
CSNK1D-211ENST00000579316 LRFN3Q9BTN0 628 aa17.02■□□□□ 0.32
CSNK1D-211ENST00000579316 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.02■□□□□ 0.32
CSNK1D-211ENST00000579316 TRANK1O15050 2925 aa17.02■□□□□ 0.31
CSNK1D-211ENST00000579316 TCF20Q9UGU0 1960 aaKnown RBP17.02■□□□□ 0.31
CSNK1D-211ENST00000579316 DCDC2CA8MYV0 355 aa17.01■□□□□ 0.31
CSNK1D-211ENST00000579316 IGSF3O75054 1194 aa17.01■□□□□ 0.31
CSNK1D-211ENST00000579316 COG2Q14746 738 aa17.01■□□□□ 0.31
CSNK1D-211ENST00000579316 RAB30Q15771 203 aa17.01■□□□□ 0.31
CSNK1D-211ENST00000579316 CCDC129Q6ZRS4 1044 aa17.01■□□□□ 0.31
CSNK1D-211ENST00000579316 TSEN34Q9BSV6 310 aaKnown RBP17.01■□□□□ 0.31
CSNK1D-211ENST00000579316 EHD4Q9H223 541 aa17.01■□□□□ 0.31
CSNK1D-211ENST00000579316 TSPYL2Q9H2G4 693 aaPredicted RBP17.01■□□□□ 0.31
CSNK1D-211ENST00000579316 MROH8Q9H579 483 aa17.01■□□□□ 0.31
CSNK1D-211ENST00000579316 HOXC10Q9NYD6 342 aa17.01■□□□□ 0.31
CSNK1D-211ENST00000579316 SAP30BPQ9UHR5 308 aaKnown RBP17.01■□□□□ 0.31
CSNK1D-211ENST00000579316 ADAMTS4O75173 837 aa17■□□□□ 0.31
CSNK1D-211ENST00000579316 PGK1P00558 417 aa17■□□□□ 0.31
CSNK1D-211ENST00000579316 UQCRFS1P1P0C7P4 283 aa17■□□□□ 0.31
CSNK1D-211ENST00000579316 IGFBP4P22692 258 aa17■□□□□ 0.31
CSNK1D-211ENST00000579316 RAB3GAP1Q15042 981 aa17■□□□□ 0.31
CSNK1D-211ENST00000579316 MB21D1Q8N884 522 aa17■□□□□ 0.31
CSNK1D-211ENST00000579316 NEUROD6Q96NK8 337 aa17■□□□□ 0.31
CSNK1D-211ENST00000579316 AAK1Q2M2I8 961 aa16.99■□□□□ 0.31
CSNK1D-211ENST00000579316 GORABQ5T7V8 394 aa16.99■□□□□ 0.31
CSNK1D-211ENST00000579316 PSRC1Q6PGN9 363 aaPredicted RBP16.99■□□□□ 0.31
CSNK1D-211ENST00000579316 SERPINB13Q9UIV8 391 aa16.99■□□□□ 0.31
CSNK1D-211ENST00000579316 MSRAQ9UJ68 235 aa16.99■□□□□ 0.31
CSNK1D-211ENST00000579316 ZNF521Q96K83 1311 aa16.98■□□□□ 0.31
CSNK1D-211ENST00000579316 MYH1P12882 1939 aa16.98■□□□□ 0.31
CSNK1D-211ENST00000579316 ACLYP53396 1101 aa16.98■□□□□ 0.31
CSNK1D-211ENST00000579316 ABCB5Q2M3G0 1257 aa16.98■□□□□ 0.31
CSNK1D-211ENST00000579316 NUP133Q8WUM0 1156 aa16.98■□□□□ 0.31
CSNK1D-211ENST00000579316 STARD7Q9NQZ5 370 aa16.98■□□□□ 0.31
CSNK1D-211ENST00000579316 MOXD2PA6NHM9 499 aa16.97■□□□□ 0.31
CSNK1D-211ENST00000579316 AKR1A1P14550 325 aa16.97■□□□□ 0.31
CSNK1D-211ENST00000579316 GUCY1A2P33402 732 aa16.97■□□□□ 0.31
CSNK1D-211ENST00000579316 MTX1Q13505 466 aa16.97■□□□□ 0.31
CSNK1D-211ENST00000579316 CERKLQ49MI3 558 aaPredicted RBP16.97■□□□□ 0.31
CSNK1D-211ENST00000579316 TMEM31Q5JXX7 168 aa16.97■□□□□ 0.31
CSNK1D-211ENST00000579316 EPHX3Q9H6B9 360 aa16.97■□□□□ 0.31
CSNK1D-211ENST00000579316 MROH7Q68CQ1 1323 aa16.96■□□□□ 0.31
CSNK1D-211ENST00000579316 ERC2O15083 957 aa16.96■□□□□ 0.31
CSNK1D-211ENST00000579316 ZNF865P0CJ78 1059 aaPredicted RBP16.96■□□□□ 0.31
CSNK1D-211ENST00000579316 FCER1AP12319 257 aa16.96■□□□□ 0.31
CSNK1D-211ENST00000579316 CSF2RAP15509 400 aa16.96■□□□□ 0.31
CSNK1D-211ENST00000579316 CDK7P50613 346 aa16.96■□□□□ 0.31
CSNK1D-211ENST00000579316 TFF2Q03403 129 aa16.96■□□□□ 0.31
CSNK1D-211ENST00000579316 CCSAPQ6IQ19 270 aaPredicted RBP16.96■□□□□ 0.31
CSNK1D-211ENST00000579316 ZNF365Q70YC5 407 aa16.96■□□□□ 0.31
CSNK1D-211ENST00000579316 TMEM199Q8N511 208 aa16.96■□□□□ 0.31
CSNK1D-211ENST00000579316 KLHDC9Q8NEP7 349 aa16.96■□□□□ 0.31
CSNK1D-211ENST00000579316 HERVK_113Q902F9 699 aa16.96■□□□□ 0.31
CSNK1D-211ENST00000579316 TINF2Q9BSI4 451 aa16.96■□□□□ 0.31
CSNK1D-211ENST00000579316 MRS2Q9HD23 443 aa16.96■□□□□ 0.31
CSNK1D-211ENST00000579316 DIS3Q9Y2L1 958 aaKnown RBP16.96■□□□□ 0.31
CSNK1D-211ENST00000579316 ZNFX1Q9P2E3 1918 aaKnown RBP16.96■□□□□ 0.3
CSNK1D-211ENST00000579316 ELP1O95163 1332 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms