RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 SLC9C1Q4G0N8 1177 aa20.77■□□□□ 0.92
ITGB4-205ENST00000579211 ZNF589Q86UQ0 364 aaPredicted RBP20.77■□□□□ 0.92
ITGB4-205ENST00000579211 GPRC5AQ8NFJ5 357 aa20.77■□□□□ 0.92
ITGB4-205ENST00000579211 PTCH2Q9Y6C5 1203 aa20.77■□□□□ 0.92
ITGB4-205ENST00000579211 MYPNQ86TC9 1320 aa20.77■□□□□ 0.91
ITGB4-205ENST00000579211 COL11A1P12107 1806 aaPredicted RBP20.76■□□□□ 0.91
ITGB4-205ENST00000579211 FGAP02671 866 aa20.76■□□□□ 0.91
ITGB4-205ENST00000579211 TFAP4Q01664 338 aa20.76■□□□□ 0.91
ITGB4-205ENST00000579211 SAMD1Q6SPF0 538 aaPredicted RBP20.76■□□□□ 0.91
ITGB4-205ENST00000579211 SPICE1Q8N0Z3 855 aa20.76■□□□□ 0.91
ITGB4-205ENST00000579211 LPAR1Q92633 364 aa20.76■□□□□ 0.91
ITGB4-205ENST00000579211 VCPKMTQ9H867 229 aa20.76■□□□□ 0.91
ITGB4-205ENST00000579211 SRRDQ9UH36 339 aa20.76■□□□□ 0.91
ITGB4-205ENST00000579211 LAMA4Q16363 1823 aa20.76■□□□□ 0.91
ITGB4-205ENST00000579211 TSPY2A6NKD2 308 aa20.75■□□□□ 0.91
ITGB4-205ENST00000579211 RANBP6O60518 1105 aaKnown RBP20.75■□□□□ 0.91
ITGB4-205ENST00000579211 GSPT1P15170 499 aaKnown RBP20.75■□□□□ 0.91
ITGB4-205ENST00000579211 CTGFP29279 349 aa20.75■□□□□ 0.91
ITGB4-205ENST00000579211 FAM47AQ5JRC9 791 aa20.75■□□□□ 0.91
ITGB4-205ENST00000579211 RUFY2Q8WXA3 655 aa20.75■□□□□ 0.91
ITGB4-205ENST00000579211 HOXC10Q9NYD6 342 aa20.75■□□□□ 0.91
ITGB4-205ENST00000579211 CLIP2Q9UDT6 1046 aa20.75■□□□□ 0.91
ITGB4-205ENST00000579211 FOXP2O15409 715 aa20.74■□□□□ 0.91
ITGB4-205ENST00000579211 COG2Q14746 738 aa20.74■□□□□ 0.91
ITGB4-205ENST00000579211 RRP12Q5JTH9 1297 aaKnown RBP20.74■□□□□ 0.91
ITGB4-205ENST00000579211 SIAH1Q8IUQ4 282 aa20.74■□□□□ 0.91
ITGB4-205ENST00000579211 ZNFX1Q9P2E3 1918 aaKnown RBP20.74■□□□□ 0.91
ITGB4-205ENST00000579211 RLFQ13129 1914 aa20.73■□□□□ 0.91
ITGB4-205ENST00000579211 WDR46O15213 610 aaKnown RBP20.73■□□□□ 0.91
ITGB4-205ENST00000579211 HAND2P61296 217 aa20.73■□□□□ 0.91
ITGB4-205ENST00000579211 NEDD1Q8NHV4 660 aa20.73■□□□□ 0.91
ITGB4-205ENST00000579211 NYAP2Q9P242 653 aa20.73■□□□□ 0.91
ITGB4-205ENST00000579211 RBPJLQ9UBG7 517 aa20.73■□□□□ 0.91
ITGB4-205ENST00000579211 MORF4L1Q9UBU8 362 aa20.73■□□□□ 0.91
ITGB4-205ENST00000579211 BIN2Q9UBW5 565 aaPredicted RBP20.73■□□□□ 0.91
ITGB4-205ENST00000579211 ANAPC4Q9UJX5 808 aa20.73■□□□□ 0.91
ITGB4-205ENST00000579211 ZNF213O14771 459 aa20.72■□□□□ 0.91
ITGB4-205ENST00000579211 FLOT1O75955 427 aa20.72■□□□□ 0.91
ITGB4-205ENST00000579211 TTLL1O95922 423 aa20.72■□□□□ 0.91
ITGB4-205ENST00000579211 SOX10P56693 466 aa20.72■□□□□ 0.91
ITGB4-205ENST00000579211 ERVK-9P63128 1117 aa20.72■□□□□ 0.91
ITGB4-205ENST00000579211 ERVK-24P63145 666 aa20.72■□□□□ 0.91
ITGB4-205ENST00000579211 CCNA1P78396 465 aa20.72■□□□□ 0.91
ITGB4-205ENST00000579211 PRKCZQ05513 592 aa20.72■□□□□ 0.91
ITGB4-205ENST00000579211 PPP4R3BQ5MIZ7 849 aa20.72■□□□□ 0.91
ITGB4-205ENST00000579211 MFSD6Q6ZSS7 791 aa20.72■□□□□ 0.91
ITGB4-205ENST00000579211 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.72■□□□□ 0.91
ITGB4-205ENST00000579211 INCENPQ9NQS7 918 aa20.72■□□□□ 0.91
ITGB4-205ENST00000579211 RABGAP1Q9Y3P9 1069 aa20.72■□□□□ 0.91
ITGB4-205ENST00000579211 ZMYM6O95789 1325 aa20.72■□□□□ 0.91
ITGB4-205ENST00000579211 WDR78Q5VTH9 848 aa20.71■□□□□ 0.91
ITGB4-205ENST00000579211 CEP95Q96GE4 821 aa20.71■□□□□ 0.91
ITGB4-205ENST00000579211 TXNRD2Q9NNW7 524 aa20.71■□□□□ 0.91
ITGB4-205ENST00000579211 MTMR4Q9NYA4 1195 aa20.71■□□□□ 0.91
ITGB4-205ENST00000579211 CTNNA3Q9UI47 895 aa20.71■□□□□ 0.91
ITGB4-205ENST00000579211 ISY1Q9ULR0 285 aaKnown RBP20.71■□□□□ 0.91
ITGB4-205ENST00000579211 GABRQQ9UN88 632 aa20.71■□□□□ 0.91
ITGB4-205ENST00000579211 PLXNB2O15031 1838 aa20.71■□□□□ 0.91
ITGB4-205ENST00000579211 PEX10O60683 326 aa20.7■□□□□ 0.9
ITGB4-205ENST00000579211 MYCP01106 439 aaPredicted RBP20.7■□□□□ 0.9
ITGB4-205ENST00000579211 MAPK4P31152 587 aa20.7■□□□□ 0.9
ITGB4-205ENST00000579211 KIAA1755Q5JYT7 1200 aa20.7■□□□□ 0.9
ITGB4-205ENST00000579211 SH3TC2Q8TF17 1288 aa20.7■□□□□ 0.9
ITGB4-205ENST00000579211 TMEM106CQ9BVX2 250 aa20.7■□□□□ 0.9
ITGB4-205ENST00000579211 RNF41Q9H4P4 317 aaPredicted RBP20.7■□□□□ 0.9
ITGB4-205ENST00000579211 STX8Q9UNK0 236 aa20.7■□□□□ 0.9
ITGB4-205ENST00000579211 SPDYE16A6NNV3 312 aaPredicted RBP20.69■□□□□ 0.9
ITGB4-205ENST00000579211 F5H6K3 240 aa20.69■□□□□ 0.9
ITGB4-205ENST00000579211 GRK4P32298 578 aa20.69■□□□□ 0.9
ITGB4-205ENST00000579211 FLT3LGP49771 235 aa20.69■□□□□ 0.9
ITGB4-205ENST00000579211 KLRC3Q07444 240 aa20.69■□□□□ 0.9
ITGB4-205ENST00000579211 PLS1Q14651 629 aa20.69■□□□□ 0.9
ITGB4-205ENST00000579211 IMMTQ16891 758 aaKnown RBP20.69■□□□□ 0.9
ITGB4-205ENST00000579211 Q3C1V9 767 aa20.69■□□□□ 0.9
ITGB4-205ENST00000579211 FAM83BQ5T0W9 1011 aa20.69■□□□□ 0.9
ITGB4-205ENST00000579211 DSCC1Q9BVC3 393 aa20.69■□□□□ 0.9
ITGB4-205ENST00000579211 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.69■□□□□ 0.9
ITGB4-205ENST00000579211 RBBP6Q7Z6E9 1792 aaKnown RBP20.68■□□□□ 0.9
ITGB4-205ENST00000579211 IGKV6D-41A0A0C4DH26 115 aa20.68■□□□□ 0.9
ITGB4-205ENST00000579211 ORC4O43929 436 aa20.68■□□□□ 0.9
ITGB4-205ENST00000579211 ADCY3O60266 1144 aa20.68■□□□□ 0.9
ITGB4-205ENST00000579211 CHMLP26374 656 aa20.68■□□□□ 0.9
ITGB4-205ENST00000579211 DSG3P32926 999 aa20.68■□□□□ 0.9
ITGB4-205ENST00000579211 AKNAD1Q5T1N1 836 aa20.68■□□□□ 0.9
ITGB4-205ENST00000579211 MKL1Q969V6 931 aa20.68■□□□□ 0.9
ITGB4-205ENST00000579211 ARMC5Q96C12 935 aa20.68■□□□□ 0.9
ITGB4-205ENST00000579211 CTDP1Q9Y5B0 961 aaPredicted RBP20.68■□□□□ 0.9
ITGB4-205ENST00000579211 RAD50Q92878 1312 aa20.68■□□□□ 0.9
ITGB4-205ENST00000579211 PLIN4Q96Q06 1357 aa20.68■□□□□ 0.9
ITGB4-205ENST00000579211 KIAA0100Q14667 2235 aaKnown RBP20.68■□□□□ 0.9
ITGB4-205ENST00000579211 PCP11498 1178 aaKnown RBP20.67■□□□□ 0.9
ITGB4-205ENST00000579211 UBXN2AP68543 259 aa20.67■□□□□ 0.9
ITGB4-205ENST00000579211 LBX2Q6XYB7 198 aa20.67■□□□□ 0.9
ITGB4-205ENST00000579211 LRRC47Q8N1G4 583 aaKnown RBP20.67■□□□□ 0.9
ITGB4-205ENST00000579211 SLAIN1Q8ND83 568 aa20.67■□□□□ 0.9
ITGB4-205ENST00000579211 NUDT12Q9BQG2 462 aa20.67■□□□□ 0.9
ITGB4-205ENST00000579211 IVNS1ABPQ9Y6Y0 642 aa20.67■□□□□ 0.9
ITGB4-205ENST00000579211 A0A0G2JMZ2 1700 aa20.67■□□□□ 0.9
ITGB4-205ENST00000579211 PLEKHH3Q7Z736 793 aa20.66■□□□□ 0.9
ITGB4-205ENST00000579211 MB21D1Q8N884 522 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms