RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 EPHB4P54760 987 aa10.66□□□□□ -0.7
BRIP1-204ENST00000579028 TLE2Q04725 743 aa10.66□□□□□ -0.7
BRIP1-204ENST00000579028 GRIN2CQ14957 1233 aa10.66□□□□□ -0.7
BRIP1-204ENST00000579028 SHCBP1Q8NEM2 672 aa10.66□□□□□ -0.7
BRIP1-204ENST00000579028 ACER1Q8TDN7 264 aa10.66□□□□□ -0.7
BRIP1-204ENST00000579028 MOV10L1Q9BXT6 1211 aaKnown RBP10.66□□□□□ -0.7
BRIP1-204ENST00000579028 EHD4Q9H223 541 aa10.66□□□□□ -0.7
BRIP1-204ENST00000579028 RPAP3Q9H6T3 665 aaPredicted RBP10.66□□□□□ -0.7
BRIP1-204ENST00000579028 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.65□□□□□ -0.7
BRIP1-204ENST00000579028 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.65□□□□□ -0.7
BRIP1-204ENST00000579028 COBLO75128 1261 aa10.65□□□□□ -0.7
BRIP1-204ENST00000579028 CYP2E1P05181 493 aaPredicted RBP10.65□□□□□ -0.7
BRIP1-204ENST00000579028 CLTBP09497 229 aa10.65□□□□□ -0.7
BRIP1-204ENST00000579028 DNAJB2P25686 324 aa10.65□□□□□ -0.7
BRIP1-204ENST00000579028 DYNLL1P63167 89 aaKnown RBP10.65□□□□□ -0.7
BRIP1-204ENST00000579028 RAB3GAP1Q15042 981 aa10.65□□□□□ -0.7
BRIP1-204ENST00000579028 FAM47AQ5JRC9 791 aa10.65□□□□□ -0.7
BRIP1-204ENST00000579028 FERMT2Q96AC1 680 aa10.65□□□□□ -0.7
BRIP1-204ENST00000579028 SNRKQ9NRH2 765 aa10.65□□□□□ -0.7
BRIP1-204ENST00000579028 SERPINB13Q9UIV8 391 aa10.65□□□□□ -0.7
BRIP1-204ENST00000579028 PHF24Q9UPV7 400 aa10.65□□□□□ -0.7
BRIP1-204ENST00000579028 CT47B1P0C2W7 299 aaPredicted RBP10.64□□□□□ -0.71
BRIP1-204ENST00000579028 ERCC3P19447 782 aa10.64□□□□□ -0.71
BRIP1-204ENST00000579028 FPGSQ05932 587 aa10.64□□□□□ -0.71
BRIP1-204ENST00000579028 G3BP1Q13283 466 aaKnown RBP eCLIP10.64□□□□□ -0.71
BRIP1-204ENST00000579028 ABCB5Q2M3G0 1257 aa10.64□□□□□ -0.71
BRIP1-204ENST00000579028 CERKLQ49MI3 558 aaPredicted RBP10.64□□□□□ -0.71
BRIP1-204ENST00000579028 TTC39AQ5SRH9 613 aa10.64□□□□□ -0.71
BRIP1-204ENST00000579028 PRAMEF19Q5SWL8 479 aa10.64□□□□□ -0.71
BRIP1-204ENST00000579028 CERS3Q8IU89 383 aa10.64□□□□□ -0.71
BRIP1-204ENST00000579028 ABRAQ8N0Z2 381 aa10.64□□□□□ -0.71
BRIP1-204ENST00000579028 ATXN2LQ8WWM7 1075 aaKnown RBP10.64□□□□□ -0.71
BRIP1-204ENST00000579028 ZNF512BQ96KM6 892 aaPredicted RBP10.64□□□□□ -0.71
BRIP1-204ENST00000579028 SPATC1LQ9H0A9 340 aa10.64□□□□□ -0.71
BRIP1-204ENST00000579028 ZNF576Q9H609 170 aa10.64□□□□□ -0.71
BRIP1-204ENST00000579028 GPR108Q9NPR9 543 aa10.64□□□□□ -0.71
BRIP1-204ENST00000579028 SLC5A4Q9NY91 659 aa10.64□□□□□ -0.71
BRIP1-204ENST00000579028 HOXC10Q9NYD6 342 aa10.64□□□□□ -0.71
BRIP1-204ENST00000579028 NRBP1Q9UHY1 535 aa10.64□□□□□ -0.71
BRIP1-204ENST00000579028 VCANP13611 3396 aa10.64□□□□□ -0.71
BRIP1-204ENST00000579028 DNAH12Q6ZR08 3092 aa10.63□□□□□ -0.71
BRIP1-204ENST00000579028 RAG1P15918 1043 aa10.63□□□□□ -0.71
BRIP1-204ENST00000579028 CYP7A1P22680 504 aa10.63□□□□□ -0.71
BRIP1-204ENST00000579028 GUCY1A2P33402 732 aa10.63□□□□□ -0.71
BRIP1-204ENST00000579028 COG2Q14746 738 aa10.63□□□□□ -0.71
BRIP1-204ENST00000579028 CCDC158Q5M9N0 1113 aa10.63□□□□□ -0.71
BRIP1-204ENST00000579028 TTC6Q86TZ1 520 aa10.63□□□□□ -0.71
BRIP1-204ENST00000579028 TRMT2AQ8IZ69 625 aaKnown RBP10.63□□□□□ -0.71
BRIP1-204ENST00000579028 MB21D1Q8N884 522 aa10.63□□□□□ -0.71
BRIP1-204ENST00000579028 MAML3Q96JK9 1138 aa10.63□□□□□ -0.71
BRIP1-204ENST00000579028 MROH8Q9H579 483 aa10.63□□□□□ -0.71
BRIP1-204ENST00000579028 CABP5Q9NP86 173 aa10.63□□□□□ -0.71
BRIP1-204ENST00000579028 PIH1D3Q9NQM4 214 aaKnown RBP10.63□□□□□ -0.71
BRIP1-204ENST00000579028 RAPGEFL1Q9UHV5 662 aa10.63□□□□□ -0.71
BRIP1-204ENST00000579028 ROBO3Q96MS0 1386 aa10.63□□□□□ -0.71
BRIP1-204ENST00000579028 LAMA2P24043 3122 aaKnown RBP10.62□□□□□ -0.71
BRIP1-204ENST00000579028 PRUNE2Q8WUY3 3088 aa10.62□□□□□ -0.71
BRIP1-204ENST00000579028 PNMA6EA0A0J9YXQ4 647 aa10.62□□□□□ -0.71
BRIP1-204ENST00000579028 RARBP10826 455 aa10.62□□□□□ -0.71
BRIP1-204ENST00000579028 SHMT1P34896 483 aa10.62□□□□□ -0.71
BRIP1-204ENST00000579028 PLA2G5P39877 138 aa10.62□□□□□ -0.71
BRIP1-204ENST00000579028 ZAP70P43403 619 aa10.62□□□□□ -0.71
BRIP1-204ENST00000579028 USP5P45974 858 aa10.62□□□□□ -0.71
BRIP1-204ENST00000579028 TNNI3KQ59H18 835 aa10.62□□□□□ -0.71
BRIP1-204ENST00000579028 AKNAD1Q5T1N1 836 aa10.62□□□□□ -0.71
BRIP1-204ENST00000579028 TIFAQ96CG3 184 aa10.62□□□□□ -0.71
BRIP1-204ENST00000579028 TOX2Q96NM4 488 aa10.62□□□□□ -0.71
BRIP1-204ENST00000579028 ASB2Q96Q27 587 aa10.62□□□□□ -0.71
BRIP1-204ENST00000579028 DBNDD2Q9BQY9 259 aa10.62□□□□□ -0.71
BRIP1-204ENST00000579028 XPNPEP3Q9NQH7 507 aa10.62□□□□□ -0.71
BRIP1-204ENST00000579028 THEGQ9P2T0 379 aa10.62□□□□□ -0.71
BRIP1-204ENST00000579028 FPGT-TNNI3KV9GXZ4 949 aa10.62□□□□□ -0.71
BRIP1-204ENST00000579028 SPTBN5Q9NRC6 3674 aaKnown RBP10.62□□□□□ -0.71
BRIP1-204ENST00000579028 SMCHD1A6NHR9 2005 aa10.62□□□□□ -0.71
BRIP1-204ENST00000579028 ZNFX1Q9P2E3 1918 aaKnown RBP10.61□□□□□ -0.71
BRIP1-204ENST00000579028 A0A1W2PQ45 241 aaPredicted RBP10.61□□□□□ -0.71
BRIP1-204ENST00000579028 A0A1W2PQY0 241 aa10.61□□□□□ -0.71
BRIP1-204ENST00000579028 A0A1W2PRG0 241 aa10.61□□□□□ -0.71
BRIP1-204ENST00000579028 GABPAQ06546 454 aa10.61□□□□□ -0.71
BRIP1-204ENST00000579028 FAAP100Q0VG06 881 aa10.61□□□□□ -0.71
BRIP1-204ENST00000579028 SEPT2Q15019 361 aa10.61□□□□□ -0.71
BRIP1-204ENST00000579028 ANKRD33Q7Z3H0 272 aa10.61□□□□□ -0.71
BRIP1-204ENST00000579028 RNF180Q86T96 592 aa10.61□□□□□ -0.71
BRIP1-204ENST00000579028 MIGA1Q8NAN2 632 aa10.61□□□□□ -0.71
BRIP1-204ENST00000579028 ARHGAP45Q92619 1136 aa10.61□□□□□ -0.71
BRIP1-204ENST00000579028 CDCA7LQ96GN5 454 aa10.61□□□□□ -0.71
BRIP1-204ENST00000579028 GAS2L1Q99501 681 aaPredicted RBP10.61□□□□□ -0.71
BRIP1-204ENST00000579028 TMEM39AQ9NV64 488 aa10.61□□□□□ -0.71
BRIP1-204ENST00000579028 PARP14Q460N5 1801 aa10.61□□□□□ -0.71
BRIP1-204ENST00000579028 PQBP1O60828 265 aaKnown RBP10.6□□□□□ -0.71
BRIP1-204ENST00000579028 GABBR2O75899 941 aa10.6□□□□□ -0.71
BRIP1-204ENST00000579028 PGK1P00558 417 aa10.6□□□□□ -0.71
BRIP1-204ENST00000579028 GNAI2P04899 355 aa10.6□□□□□ -0.71
BRIP1-204ENST00000579028 FCER1AP12319 257 aa10.6□□□□□ -0.71
BRIP1-204ENST00000579028 PLCD1P51178 756 aa10.6□□□□□ -0.71
BRIP1-204ENST00000579028 RASIP1Q5U651 963 aa10.6□□□□□ -0.71
BRIP1-204ENST00000579028 TMED8Q6PL24 325 aaPredicted RBP10.6□□□□□ -0.71
BRIP1-204ENST00000579028 NCAPG2Q86XI2 1143 aa10.6□□□□□ -0.71
BRIP1-204ENST00000579028 SLC44A5Q8NCS7 719 aa10.6□□□□□ -0.71
BRIP1-204ENST00000579028 ADAMTS19Q8TE59 1207 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms